• Title/Summary/Keyword: R-trees

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Characterizations of five heterotrophic nanoflagellates newly recorded in Korea

  • Jeong, Dong Hyuk;Park, Jong Soo
    • Journal of Species Research
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    • v.10 no.4
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    • pp.356-363
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    • 2021
  • Heterotrophic nanoflagellates (HNFs, 2-20 ㎛ in size) are substantially capable of controlling bacterial abundance in aquatic environments, and microbial taxonomists have studied ecologically important and abundant HNFs for a long time. However, the classifications of HNFs have rarely been reported in Korea on the basis of morphology and 18S rDNA sequencing. Here, previously reported five HNFs from non-Korean habitats were isolated from Korean coastal seawater or intertidal sediments for the first time. Light microscopic observations and 18S rDNA phylogenetic trees revealed that the five isolated species were Cafeteria burkhardae strain PH003, Cafeteria graefeae strain UL001, Aplanochytrium minuta (formerly Labyrinthuloides minuta) strain PH004, Neobodo curvifilus strain KM017 (formerly Procryptobia sorokini), and Ancyromonas micra (formerly Planomonas micra) strain IG005. Being morphologically and phylogenetically indistinct from its closest species, all isolates from Korea were therefore regarded as identical species detected in other countries. Thus, this result indicates an expansion of known habitats that range from those of the five isolates in natural ecosystems on Earth.

Experiments of Individual Tree and Crown Width Extraction by Band Combination Using Monthly Drone Images (월별 드론 영상을 이용한 밴드 조합에 따른 수목 개체 및 수관폭 추출 실험)

  • Lim, Ye Seul;Eo, Yang Dam;Jeon, Min Cheol;Lee, Mi Hee;Pyeon, Mu Wook
    • Journal of Korean Society for Geospatial Information Science
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    • v.24 no.4
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    • pp.67-74
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    • 2016
  • Drone images with high spatial resolution are emerging as an alternative to previous studies with extraction limits in high density forests. Individual tree in the dense forests were extracted from drone images. To detect the individual tree extracted through the image segmentation process, the image segmentation results were compared between the combination of DSM and all R,G,B band and the combination of DSM and R,G,B band separately. The changes in the tree density of a deciduous forest was experimented by time and image. Especially the image of May when the forests are dense, among the images of March, April, May, the individual tree extraction rate based on the trees surveyed on the site was 50%. The analysis results of the width of crown showed that the RMSE was less than 1.5m, which was the best result. For extraction of the experimental area, the two sizes of medium and small trees were extracted, and the extraction accuracy of the small trees was higher. The forest tree volume and forest biomass could be estimated if the tree height is extracted based on the above data and the DBH(diameter at breast height) is estimated using the relational expression between crown width and DBH.

Height-DBH Growth Models of Major Tree Species in Chungcheong Province (충청지역 주요 수종의 수고-흉고직경 생장모델에 관한 연구)

  • Seo, Yeon Ok;Lee, Young Jin;Rho, Dai Kyun;Kim, Sung Ho;Choi, Jung Kee;Lee, Woo Kyun
    • Journal of Korean Society of Forest Science
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    • v.100 no.1
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    • pp.62-69
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    • 2011
  • Six commonly used non-linear growth functions were fitted to individual tree height-dbh data of eight major tree species measured by the $5^{th}$ National Forest Inventory in Chungcheong province. A total of 2,681 trees were collected from permanent sample plots across Chungcheong province. The available data for each species were randomly splitted into two sets: the majority (90%) was used to estimate model parameters and the remaining data (10%) were reserved to validate the models. The performance of the models was compared and evaluated by $R^2$, RMSE, mean difference (MD), absolute mean difference (AMD) and mean difference(MD) for diameter classes. The combined data (100%) were used for final model fitting. The results showed that these six sigmoidal models were able to capture the height-diameter relationships and fit the data equally well, but produced different asymptote estimates. Sigmoidal growth models such as Chapman-Richards, Weibull functions provided the most satisfactory height predictions. The effect of model performance on stem volume estimation was also investigated. Tree volumes of different species were computed by the Forest Resources Evaluation and Prediction Program using observed range of diameter and the predicted tree total height from the six models. For trees with diameter less than 30 cm, the six height-dbh models produced very similar results for all species, while more differentiation among the models was observed for large-sized trees.

Multi-query Indexing Technique for Efficient Query Processing on Stream Data in Sensor Networks (센서 네트워크에서 스트림 데이터 질의의 효율적인 처리를 위한 다중 질의 색인 기법)

  • Lee, Min-Soo;Kim, Yearn-Jeong;Yoon, Hye-Jung
    • Journal of Korea Multimedia Society
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    • v.10 no.11
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    • pp.1367-1383
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    • 2007
  • A sensor network consists of a network of sensors that can perform computation and also communicate with each other through wireless communication. Some important characteristics of sensor networks are that the network should be self administered and the power efficiency should be greatly considered due to the fact that it uses battery power. In sensor networks, when large amounts of various stream data is produced and multiple queries need to be processed simultaneously, the power efficiency should be maximized. This work proposes a technique to create an index on multiple monitoring queries so that the multi-query processing performance could be increased and the memory and power could be efficiently used. The proposed SMILE tree modifies and combines the ideas of spatial indexing techniques such as k-d trees and R+-trees. The k-d tree can divide the dimensions at each level, while the R+-tree improves the R-tree by dividing the space into a hierarchical manner and reduces the overlapping areas. By applying the SMILE tree on multiple queries and using it on stream data in sensor networks, the response time for finding an indexed query takes in some cases 50% of the time taken for a linear search to find the query.

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Evaluating the Ecological Characteristic and the Relative Significance for Forest Resources Management on the Uninhabitable Islands in Jeju Special Self-Governing Province (제주도 부속 무인도서의 산림자원관리를 위한 자연환경 특성과 상대적 중요도 평가)

  • Won, Hyun-Kyu;Jung, Sung-Cheol;Kim, Eun-Mi;Seo, Yeon-Ok;Kwon, Jin-O;Choa, Jong-Heon
    • Journal of Korean Society of Forest Science
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    • v.103 no.4
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    • pp.599-604
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    • 2014
  • This study was conducted to analyze the ecological environment of the 53 uninhabitable islands of Jeju for the management formulation. The result of the Pearson correlation analysis were 0.647(p<0.01) for herbs, 0.585(p<0.01) for trees and 0.762 (p<0.01) for animals which means that there is a high correlation between the size of the forests in the uninhabitable islands and the species diversity of herbs, trees and animals. For the regression modeling to predict the forest area, the R value was 0.899 and the $R^2$ was 0.803 with 79.7% statistical significance. This study also classified the uninhabited islands based on its forest area into two classes, with a forests area of 0.5ha and with a forest of approximately 12ha. The importance value of the biodiversity in the uninhabited islands was also evaluated using DEA and the islands with higher importance, namely DMU14(0.941), DMU36(0.964), DMU44(1.000) and DMU45(0.903) were recommended to be managed. It was observed that uninhabited islands with forests had a mean importance value of 0.439 which is higher as compared to the uninhabited islands without forests with 0.096. This verified that there is close relationship between forest and biodiversity.

Estimating the Parameters of Pollen Flow and Mating System in Pinus densiflora Population in Buan, South Korea, Using Microsatellite Markers (Microsatellite 표지를 이용한 부안지역 소나무 집단의 화분 유동과 교배양식 추정)

  • Kim, Young Mi;Hong, Kyung Nak;Park, Yu Jin;Hong, Yong Pyo;Park, Jae In
    • Korean Journal of Plant Resources
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    • v.28 no.1
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    • pp.101-110
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    • 2015
  • Parameters of mating system and pollen flow of a Pinus densiflora population in Buan, South Korea, were estimated using seven nuclear microsatellite markers. The expected heterozygosity ($H_e$) was 0.614 in mother trees and 0.624 in seeds. Fixation index (F) was 0.018 and 0.087 in each generation. There was no significant genetic difference between the generations (P > 0.05). From MLTR, the outcrossing rate ($t_m$), the biparental inbreeding ($t_m-t_s$), and the correlation of paternity ($r_p$) were 0.967, 0.057, and 0.012, respectively. tm was larger but $t_m-t_s$ and $r_p$ were smaller than those of allozyme markers in Pinus densiflora. These values were similar to those of microsatellite markers in other pine species. The optimal pollen dispersal model from TwoGener was the normal dispersal model with the effective density of 220 trees/ha and its level of genetic differentiation in pollen pool structure (${\Phi}_{ft}$) was 0.021. The average radial distance of pollen flow (${\delta}$) was calculated as 11.42 m, but no correlation between the pairwise-${\Phi}_{ft}$ and the geographical distance among mother trees was at Mantel test (r = -0.141, P > 0.05). Although the effective pollen dispersal in the population seems to be restricted, the amount of genetic variation might be maintained in each generation without a loss of genetic diversity. It might be because the genetic diversity in pollen pool was high but the genetic difference between pollen donors was small under the complete random mating condition in the Pinus densiflora population in Buan.

Growth and Fruiting Characteristics and No. of Acorns/tree Allometric Equations of Quercus acuta Thunb. in Wando Island, Korea (완도지역 붉가시나무의 성장 및 결실 특성과 종실량 상대성장식)

  • Kim, Sodam;Park, In-Hyeop
    • Korean Journal of Environment and Ecology
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    • v.33 no.4
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    • pp.440-446
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    • 2019
  • This study examined the growth and fruiting characteristics and the acorns biomass allometric equation of Quercus acuta to provide reference data related to the growth and seed supply during the restoration of evergreen forest in the warm temperate zone in Wando Island, Korea. For the growth survey, we selected and cut three sample trees having a mean diameter at breast height (DBH) to investigate the growth analysis through a stem analysis. We then developed the allometric equation (Y=aX+b) of DBH and tree height growth characteristic (Y) according to the average tree age (X) of sampled trees and estimated the DBH and tree height according to the age of Quercus acuta. For the fruiting survey, we selected and cut three sample trees with full fruit in August when, they are at the early mature fruiting stage, for the analysis. To develop the acorns/tree biomass allometric equation of Quercus acuta, we selected and cut ten sample trees of evenly divided diameters. The acorns biomass allometric equation ($Y=aX^b$) was derived by analyzing the biomass (Y) and the growth characteristics (X), such as the DBH, tree height, crown width, and crown height. The allometric equations of average tree age according to DBH and tree height were Y=0506X-2.064 ($R^2=0.999$) and Y=0.321X+0689 ($R^2=0.992$), respectively. The developed allometric equations estimated that the DBH were 3.0cm, 8.1cm, 13.1cm and 18.2cm while the tree heights were 3.9m, 7.1m, 10.3m, and 13.5m when the tree ages were 10, 20, 30, and 40 years, respectively. The analysis results of fruiting characteristics showed that the length, the diameter, the number of fruits, and the number of acorns per fruiting branch had the statistically significant difference and tended to decrease from the upper part to the lower part of crown downward. The total number of acorns was 1,312 acorns/tree in the upper part, 115 acorns/tree in the middle part, and 5 acorns/tree in the lower part of the crown. The allometric equation for the amount of acorns with DBH as an independent variable was $Y=0.003X^{4.260}$ with the coefficient of determination at 0.896. Although the coefficient of determination of the allometric equation using only DBH as the independent variable was lower than that using DBH and tree height ($D^2H$), it would be more practical to consider only DBH as the independent variable because of measurement errors.

Sericulture Practices and Future Strategies under Present Scenario of Indian Subtropics

  • Singhal, B.K.;Dhar, Anil;Bindroo, B.B.;Bakshi, R.L.;Khan, M.A.
    • International Journal of Industrial Entomology and Biomaterials
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    • v.7 no.2
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    • pp.107-115
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    • 2003
  • The present paper deals with the mulberry cultivation technology with package of practices for successful sericulture in Indian sub-tropics. The information on leaf nutritional quality in trained and untrained trees is provided. Besides, the current status of sericultural practices is discussed based on the problems faced by the industry and intensive field surveys undertaken in different areas of one of the most potential sericultural provinces.

Microbial Evaluation of Fodder Tree Leaves as Ruminant Feed

  • Odenyo, A.A.;Osuji, P.O.;Negassa, D.
    • Asian-Australasian Journal of Animal Sciences
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    • v.12 no.5
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    • pp.708-714
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    • 1999
  • Fermentation of legume fodder tree leaves by rumen microorganisms was evaluated. The substrates were sun-dried, ground leaves. Gas and volatile fatty acid (VFAs) production were estimated. Using gas production as an index of fermentation at 12 h, the leaves tested ranked as follows; Chamaecytisus palmensis>Gliricidia sepium>Sebania sesban>Tephrosia bracteolate>Leucaena pallida>Vernonia amygdalina>Acacia sieberiana>Sesbania goetzei>Acacia angustissima. Using VFA production, the ranking was a follows; G. sepium>S. sesban>S. goetzei>L. pallida>C. palmensis/V. amygdalina>T. bracteolate> A. sieberiana>A. angustissima. Absolute gas or VFA production rates, were also used to rank the leaves. Extracts (70% acetone) of A. angustissima inhibited the growth of Ruminococcus albus 8, R. flavefaciens FD-1, Prevotella ruminicola D3ID and Streptococcus bovis JBI while the trowth of Selenomonas ruminantium D was depressed when 0.6 ml exracts were added. C. palmensis water extracts enhanced cellulose hydrolysis by R. flavefaciens FD-1. All extracts reduced celluloysis by R. albus 8. R. flavefaciens FD-1 hydrolyzed more (p<0.001) cellulose than R. albus 8.

Intraspecific Molecular Phylogeny, Genetic Variation and Phylogeography of Reticulitermes speratus (Isoptera:Rhinotermitidae)

  • Park, Yung Chul;Kitade, Osamu;Schwarz, Michael;Kim, Joo Pil;Kim, Won
    • Molecules and Cells
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    • v.21 no.1
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    • pp.89-103
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    • 2006
  • Population structure was investigated in Reticulitermes speratus populations in the Korean Peninsula and the Japanese Archipelago. All trees derived from analyses of the combined sequence dataset of two mitochondrial genes, COII and COIII, showed that R. speratus populations cluster into two major clades comprising the Korean/southern Japanese populations and the northern Japanese populations. Analysis of population genetic structure showed strong genetic partitioning between populations of the two clades. To understand historical migration routes and current distributions, the phylogeographic history of R. speratus was inferred from intra-/interspecific phylogeny and divergence times estimated between the clades of the phylogenetic tree. The estimated migration route and divergence time of ancestral R. speratus are congruent with recent paleogeographic hypotheses involving land-bridge connections between the Asian continent and the Japanese Archipelago. We suggest that ancestral R. speratus separated into northern and southern Japanese populations after its migration into the Japanese main islands from East China during the early Pleistocene via the East China Sea basin, which may have been exposed during that period. The Korean populations seem to have diverged recently from southern Japanese populations; this may explain the current distribution of R. speratus in the Japanese Arachipelago, and account for why it is restricted to northern areas of the Tokara Strait.