• Journal of the Korea Institute of Information and Communication Engineering
• /
• v.4 no.5
• /
• pp.971-976
• /
• 2000

The main objective of this paper is to present the rain cell size distribution observed during squall line episodes in the Sudano-Sahelian region. The used data were collected during the EPSAT Program [Etude des Precipitation par SATellite (Satellites Study of Precipitation)] which has been developed since 1958, on an experimental area located near Niamey, Niger (2 10′32"E, 13 28′38"N). The data were obtained with a C-band radar and a network composed of approximately 100 raingages over a 10,000 $\textrm{km}^2$. In this work a culling of the squall line episodes was made for the 1992 rainy season. After radar data calibration using the raingage network a number of PPI (Plan Position Indicator) images were generated. Each image was then treated in order to obtain a series of radar reflectivity (Z) maps. To describe the cell distribution, a contouring program was used to analyze the areas with rain rate greater than or equal to the contour threshold (R$\geq$$\tau$). 24700 contours were generated, where each iso-pleth belongs to a predefined threshold. Computing each cell surface and relating its area to an equi-circle (a circle having the same area as the cell), a statistical analysis was made. The results show that the number of rain cells having a given size is an inverse exponential function of the equivalent radius. The average and median equivalent radii ate 1.4 and 0.69 In respectively. Implications of these results for the precipitation estimation using threshold methods are discussed.

• Journal of Integrative Natural Science
• /
• v.8 no.4
• /
• pp.273-284
• /
• 2015

Chemoattractant Receptor Homologous molecule expressed on Th2 cells (CRTh2) is a chemoattractant receptor with seven transmembrane helices targeted for inflammatory diseases such as asthma and allergic rhinitis. In this study, pharmacophore based Comparative Molecular Similarity Indices Analysis (CoMSIA) were performed on the series of 2-(2-(benzylthio)-1H-benzo[d]imidazol-1-yl) acetic acids derivatives. Initially, GASP module was used for generation of pharmacophore models using five highly active compounds from the dataset. Among the generated pharmacophores, the best pharmacophore model was selected based on fitness score and was used as template for the alignment of compounds which was used for CoMSIA analysis. The best predictions were obtained utilizing steric, hydrophobic and H-bond acceptor parameters showing a $q^2$=0.559 and $r^2$=0.730. 15 test set compounds was used to investigate the predictive ability of the CoMSIA model. Contour maps suggested that presence of bulky substituents and H-bond acceptor atoms at $5^{th}$ position of benzene ring will increase the activity of the compounds. The results obtained from this study will be useful to design more potent CRTh2 antagonists.

• Bulletin of the Korean Chemical Society
• /
• v.34 no.3
• /
• pp.899-906
• /
• 2013

Using generated conformations from docking analysis by Gold algorithm, some 3D-QSAR models; CoMFA and CoMSIA have been created on 39 N-benzoylated phenoxazines and phenothiazines, including their S-oxidized analogues. These molecules inhibit the polymerization of tubulin into microtubules and thus they have been studied for the development of antitumor drugs. Training set for the CoMFA and CoMSIA models using 30 docked conformations gives $q^2$ Leave one out (LOO) values of 0.756 and 0.617, and $r^2$ ncv values of 0.988 and 0.956, respectively. The ability of prediction and robustness of the models were evaluated by test set, cross validation (leave-one-out and leave-ten-out), bootstrapping, and progressive scrambling approaches. The all-orientation search (AOS) was used to achieve the best orientation to minimize the effect of initial orientation of the structures. The docking results confirmed CoMFA and CoMSIA contour maps. The docking and 3D-QSAR studies were thoroughly interpreted and discussed and confirmed the experimental $pIC_{50}$ values.

• ALGAE
• /
• v.30 no.1
• /
• pp.49-58
• /
• 2015

In September 2007, reports of respiratory irritation and fish kills were received by the Florida Fish and Wildlife Conservation Commission (FWC) from the Jacksonville, Florida area. Water samples collected in this area indicated a bloom of Karenia brevis, the dinoflagellate that produces brevetoxin, which can cause neurotoxic shellfish poisoning. For the next four months, K. brevis was found along approximately 400 km of coastal and Intracoastal waterways from Jacksonville to Jupiter Inlet. This event represents the longest and most extensive red tide the east coast of Florida has experienced and the first time Karenia species other than K. brevis have been reported in this area. This extensive red tide influenced commercial and recreational shellfish harvesting activities along Florida's east coast. Fourteen shellfish harvesting areas (SHAs) were monitored weekly during this event and 10 SHAs were closed for an average of 53 days due to this red tide. The length of SHA closure was dependent on the shellfish species present. Interagency cooperation in monitoring this K. brevis bloom was successful in mitigating any human health impacts. Kernel density estimation was used to create geographic extent maps to help extrapolate discreet sample data points into $5km^2$ radius values for better visualization of the bloom.

• Journal of Integrative Natural Science
• /
• v.8 no.2
• /
• pp.89-98
• /
• 2015

Chemoattractant receptor homologous molecule expressed on Th2 cells (CRTh2) is a G-protein coupled receptor targeted for inflammatory diseases such as asthma, allergic rhinitis and atopic dermatitis. In this study, pharmacophore modeling and comparative molecular field analysis (CoMFA) were performed on the series of 2-(2-(benzylthio)-1H-benzo[d]imidazol-1-yl) acetic acids derivatives. Five highly active compounds were used for generation of pharmacophore models using GASP module. The best pharmacophore model was selected and used as template for the alignment of compounds which was used for CoMFA analysis. The best predictions obtained for CoMFA was $q^2=0.545$, $r^2=0.756$. The predictive ability of the model was investigated using 15 test set compounds. Contour maps suggested that presence of bulky substituents at $5^{th}$ position of benzene ring connected to suphur atoms attached to imidazol ring will increase the activity of the compounds. The results obtained from this study will be useful to design more potent CRTh2 antagonists.

• The Bulletin of The Korean Astronomical Society
• /
• v.42 no.1
• /
• pp.33.1-33.1
• /
• 2017

Molecular clouds are the sites of stellar birth, and conditions within the clouds control the mode and tempo of star formation. In particular, turbulence largely determines the density and velocity fields, and can affect the gas kinetic temperature as it decays via shocks. However, despite its central role in star formation and many years of study, the properties of turbulence remain poorly understood. As a part of the TRAO key science program, "Mapping turbulent properties of star-forming molecular clouds down to the sonic scale (PI: Jeong-Eun Lee)", we mapped the northern region of the Orion A molecular cloud and the L1688 region of the ${\rho}$ Ophiuchus molecular cloud in 2 sets of lines (13CO 1-0/C18O 1-0 and HCN 1-0/and HCO+ 1-0) using the Taeduk Radio Astronomy Observatory (TRAO) 14-m telescope. We analyze these maps using a python package 'Turbustat', a toolkit which contains 16 different turbulent statistics. We will present the preliminary results of our TRAO observations and various turbulence statistical analyses.

• Journal of Environmental Science International
• /
• v.25 no.1
• /
• pp.11-21
• /
• 2016

The soil contamination by heavy metals in playgrounds of kindergartens in Vilnius city is analysed in this article. The aim of this research is to investigate and evaluate soil contamination by heavy metals in playgrounds of kindergartens in different territories of Vilnius city. Concentrations of heavy metals were measured using Thermo Fisher Scientific Niton$^{(R)}$ XL2 X-ray fluorescence spectrometer. Maximum allowable and background concentrations that are given in Lithuanian hygiene standard and Lithuania geochemical atlas are used to compare and evaluate concentrations of heavy metals. Concentrations of heavy metals and their spatial distribution were analysed in order to exclude the most contaminated areas relating with different functional areas of the city. Geo-statistical analysis and maps of spatial distribution were developed using IDW interpolator in ArcMap software. Detail soil surveys helps to assess the extent of anthropogenic impact in different parts of the city which can be harmful to the soil ecosystem and human health. Such researches can help to change or select different function for city areas in territorial planning process.

• Asian-Australasian Journal of Animal Sciences
• /
• v.15 no.12
• /
• pp.1822-1830
• /
• 2002

The microsatellites are the short tandem repeats of 1 to 6 bp long monomer sequences that are repeated several times. These short tandem repeats are considered to be generated by the slipped strand mispairing. Based on the unique capability of alternating purine-pyrimidine residues to form Z-DNA, the possible role of the microsatellites in gene regulation has been proposed. The microsatellites are highly polymorphic, follow Mendelian inheritance and are evenly distributed throughout the genomes of eukaryotes. They are easy to isolate and the polymerase chain reaction based typing of the alleles can be readily automated. These properties make them the preferred markers for comparison of the genetic structure of the closely related breeds/populations; very high-resolution genetic mapping and parentage testing etc. The microsatellites have rapidly replaced the restriction fragment length polymorphism (RFLP) and the random amplified polymorphic DNA (RAPD) in most applications in the population genetics studies in most species, including the various farm animals viz. cattle, buffalo, goat, sheep and pigs etc. More and more reports are now available describing the use of microsatellites in pigs ranging from measurement of genetic variation between breeds/populations, developing high resolution genetic maps to identifying and mapping genes of biological and economic importance.

• International Journal of Aeronautical and Space Sciences
• /
• v.9 no.1
• /
• pp.100-110
• /
• 2008

It is not easy to monitor and identify all engine faults and conditions using conventional fault detection approaches like the GPA (Gas Path Analysis) method due to the nature and complexity of the faults. This study therefore focuses on a model based diagnostic method using Neural Network algorithms proposed for fault detection on a turbo shaft engine (PW 206C) selected as the power plant for a tilt rotor type unmanned aerial vehicle (Smart UAV). The model based diagnosis should be performed by a precise performance model. However component maps for the performance model were not provided by the engine manufacturer. Therefore they were generated by a new component map generation method, namely hybrid method using system identification and genetic algorithms that identifies inversely component characteristics from limited performance deck data provided by the engine manufacturer. Performance simulations at different operating conditions were performed on the PW206C turbo shaft engine using SIMULINK. In order to train the proposed BPNN (Back Propagation Neural Network), performance data sets obtained from performance analysis results using various implanted component degradations were used. The trained NN system could reasonably detect the faulted components including the fault pattern and quantity of the study engine at various operating conditions.

• The Journal of Natural Sciences
• /
• v.8 no.1
• /
• pp.27-32
• /
• 1995

Magnetic Resonance Imaging anti-solenoid probes have been constructed for the internal imaging. Signal-to-noise ratios of the images acquired by the anti-solenoid probes were compared with those obtained by commercial probes such as a head coil and a body coil. In terms of the internal imaging, the anti-solenoid probes, constructed in the present study, was performed better than the conventional commercial probes. Also, RF(radio-frequency)-field maps produced by the anti-solenoid probes have been simulated using computers. The possibility of human internal imaging using the anti-solenoid probes has been discussed as well.