• Title/Summary/Keyword: Purity assessment

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DNA fingerprinting analysis for soybean (Glycine max) varieties in Korea using a core set of microsatellite marker (핵심 Microsatellite 마커를 이용한 한국 콩 품종에 대한 Fingerprinting 분석)

  • Kwon, Yong-Sham
    • Journal of Plant Biotechnology
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    • v.43 no.4
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    • pp.457-465
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    • 2016
  • Microsatellites are one of the most suitable markers for identification of variety, as they have the capability to discriminate between narrow genetic variations. The polymorphism level between 120 microsatellite primer pairs and 148 soybean varieties was investigated through the fluorescence based automatic detection system. A set of 16 primer pairs showed highly reproducible polymorphism in these varieties. A total of 204 alleles were detected using the 16 microsatellite markers. The number of alleles per locus ranged from 6 to 28, with an average of 12.75 alleles per locus. The average polymorphism information content (PIC) was 0.86, ranging from 0.75 to 0.95. The unweighted pair group method using the arithmetic averages (UPGMA) cluster analysis for 148 varieties were divided into five distinctive groups, reflecting the varietal types and pedigree information. All the varieties were perfectly discriminated by marker genotypes. These markers may be useful to complement a morphological assessment of candidate varieties in the DUS (distinctness, uniformity and stability) test, intervening of seed disputes relating to variety authentication, and testing of genetic purity in soybean varieties.

Oxidative stability of omega-3 dietary supplements according to product characteristics

  • Kwon, Hyeon Jeong;Yun, Ho Cheol;Lee, Ji Yoon;Jeong, Eun Jung;Cho, Hyun Nho;Kim, Da Young;Park, Sung Ah;Lee, Seung Ju;Kang, Jung Mi
    • Analytical Science and Technology
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    • v.33 no.5
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    • pp.215-223
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    • 2020
  • The objectives of the present study were to assess the oxidative stability of South Korean n-3 (omega-3 fatty acid) supplements carried out from 2018 to 2019 and evaluate the influence of product characteristics on oxidative safety. A total of 76 n-3 supplements were analysed for oxidation safety by four markers, including acid value (AV), primary oxidation (peroxide value, PV), secondary oxidation (p-anisidine value, pAV) and total oxidation value (TOTOX). Among the supplements tested, 5.3 %, 55.3 %, 28.9 % and 46.1 % exceeded the international voluntary recommended levels for AV, PV, pAV and TOTOX, respectively. Purity (%) of products, remainder of expiration date (suggested shelf life), package in press through package (PTP) and products with additives had statistically significant differences oxidation assessment levels (p < 0.05). In addition, n-3 group found in Algae oil had significantly lower AV levels than the group that did not, and product with Alaska pollack oil, had significantly higher pAV levels than without group (p < 0.05). The high oxidation status of South Korean n-3 products in the present study could not be considered a public health problem right now. However, the levels of oxidation may affect a lot the efficacy and safety of using n-3 supplements. Thus, current oxidation safety limits should be reestablished by regulatory bodies to ensure the safety and efficacy of n-3 supplements, so that the standards could be applied to the products available to consumers.

Development of Long Term Flow Duration Curves for the Management of Total Maximum Daily Loads - in the Nakdong River Basin - (수질오염총량관리 단위유역 장기유황곡선 구축 -낙동강수계를 대상으로-)

  • Kim, Gyeong hoon;Kwon, Heon gak;Ahn, Jung min;Kim, Sanghun;Im, Tae hyo;Shin, Dong seok;Jung, Kang-Young
    • Journal of Environmental Science International
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    • v.26 no.8
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    • pp.939-953
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    • 2017
  • For the development of flow duration curves for the management of 41 Total Maximum Daily Load (TMDL) units of the Nakdong River basin, first, an equation for estimating daily flow rates as well as the level of correlation (correlation and determination coefficients) was extrapolated through regression analysis of discrete (Ministry of Environment) and continuous (Ministry of Land, Infrastructure and Transportation) measurement data. The equation derived from the analysis was used to estimate daily flow rates in order to develop flow duration curves for each TMDL unit. By using the equation, the annual flow duration curves and flow curves, for the entire period and for each TMDL unit of the basin, were developed to be demonstrated in this research. Standard flow rates (abundant-, ordinary-, low- and drought flows) for major flow duration periods were calculated based on the annual flow duration curves. Then, the flow rates, based on percentile ranks of exceedance probabilities (5, 25, 50, 75, and 95%), were calculated according to the flow duration curves for the entire period and are suggested in this research. These results can be used for feasibility assessment of the set values of primary and secondary standard flow rates for each river system, which are derived from complicated models. In addition, they will also be useful for the process of implementing TMDL management, including evaluation of the target level of water purity based on load duration curves.

Determination of Sperm Sex Ratio in Bovine Semen Using Multiplex Real-time Polymerase Chain Reaction

  • Khamlor, Trisadee;Pongpiachan, Petai;Sangsritavong, Siwat;Chokesajjawatee, Nipa
    • Asian-Australasian Journal of Animal Sciences
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    • v.27 no.10
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    • pp.1411-1416
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    • 2014
  • Gender selection is important in livestock industries; for example, female calves are required in the dairy industry. Sex-sorted semen is commonly used for the production of calves of the desired gender. However, assessment of the sex ratio of the sorted semen is tedious and expensive. In this study, a rapid, cost effective and reliable method for determining the sex ratio was developed using a multiplex real-time polymerase chain reaction (PCR) assay. In this assay, the X and Y chromosome-specific markers, i.e., bovine proteolipid protein (PLP) gene and sex-determining region Y (SRY) were simultaneously quantified in a single tube. The multiplex real-time PCR assay was shown to have high amplification efficiencies (97% to 99%) comparable to the separated-tube simplex real-time PCR assay. The results obtained from both assays were not significantly different (p>0.05). The multiplex assay was validated using reference DNA of known X ratio (10%, 50%, and 90%) as templates. The measured %X in semen samples were the same within 95% confidence intervals as the expected values, i.e., >90% in X-sorted semen, <10% in Y-sorted semen and close to 50% in the unsorted semen. The multiplex real-time PCR assay as shown in this study can thus be used to assess purity of sex-sorted semen.

Development of SCAR Markers for Early Identification of Cytoplasmic Male Sterility Genotype in Chili Pepper (Capsicum annuum L.)

  • Kim, Dong Hwan;Kim, Byung-Dong
    • Molecules and Cells
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    • v.20 no.3
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    • pp.416-422
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    • 2005
  • We previously used Southern blot analysis to detect restriction-length polymorphisms between male fertile and cytoplasmic male sterile (CMS) cytoplasms at the coxII and atp6 loci of the mtDNA of Capsicum annuum L. Two copies of atp6 were found in each male fertile and CMS pepper lines. Interestingly, one of the copies of atp6 in CMS pepper was a 3'-truncated pseudogene. The open reading frame of the coxII gene was the same in the fertile (N-) and CMS (S-) lines. However, the nucleotide sequence in the S-cytoplasm diverged from that in the N-cytoplasm 41 bp downstream of the stop codon. To develop CMS-specific sequence-characterized amplified region (SCAR) markers, inverse PCR was performed to characterize the nucleotide sequences of the 5' and 3' flanking regions of mitochondrial atp6 and coxII from the cytoplasms of male fertile (N-) and CMS (S-) pepper plants. Based on these data, two CMS-specific SCAR markers, 607 and 708 bp long, were developed to distinguish N-cytoplasm from S-cytoplasm by PCR. The CMS-specific PCR bands were verified for 20 cultivars containing either N- or S-cytoplasm. PCR amplification of CMS-specific mitochondrial nucleotide sequences will allow quick and reliable identification of the cytoplasmic types of individual plants at the seedling stage, and assessment of the purity of $F_1$ seed lots. The strategy used in this report for identifying CMS-specific markers could be adopted for many other crops where CMS is used for F1 seed production.

Upcycling of Waste Jelly-Filled Communication Cables (폐 젤리충진 통신케이블 업사이클링 연구)

  • Cho, Sungsu;Lee, Sooyoung;Hong, Myunghwan;Seo, Minhye;Lee, Dukhee;Uhm, Sunghyun
    • Resources Recycling
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    • v.24 no.2
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    • pp.29-35
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    • 2015
  • A feasibility test was carried out for upcycling of waste jelly-filled communication cables together with the development of environmentally friendly processes and equipments. High pressure water injection is proved to be an exceptionally environmentally friendly and highly efficient mechanical process. A batch-type cable barking equipment is designed and built on the basis of computational fluid dynamics modelling. It is optimized in terms of energy consumption and productivity with very high copper recovery of 99.5%. Copper nano-powder is prepared by an electrical wire explosion in ethanol media in order to improve the value of final products, and the preliminary economical assessment is also conducted.

Genetic Diversity of Korean Barley (Hordeum vulgare L.) Varieties Using Microsatellite Markers (Microsatellite 마커를 이용한 한국 보리 품종의 유전적 다양성)

  • Kwon, Yong-Sham;Hong, Jee-Hwa;Choi, Keun-Jin
    • Korean Journal of Breeding Science
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    • v.43 no.4
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    • pp.322-329
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    • 2011
  • Microsatellite markers were utilized to investigate genetic diversity among 70 Korean barley varieties (Hordeum vulgare). Ninety nine microsatellite primer pairs were screened for 9 varieties. Twenty primer pairs showed highly polymorphic. The relationship between markers genotypes and 70 varieties was analyzed. A total of 124 polymorphic amplified fragments were obtained by using 20 microsatellite markers. Two to nine SSR alleles were detected for each locus with an average of 6.2 alleles per locus. Average polymorphism information content (PIC) was 0.734, ranging from 0.498 to 0.882. A total of 124 marker loci were used to calculate Jaccard's distance coefficients for cluster analysis using UPGMA. Clustering group was divided 2 groups corresponding to 2-rowed and 6-rowed barley varieties. The phenogram was discriminated all varieties by markers genotypes. These markers may be used wide range of practical application in variety identification and genetic purity assessment of barley.

Assessment of chemical purity of [13N]ammonia injection: Identification of aluminium ion concentration

  • Kim, Ho Young;Park, Jongbum;Lee, Ji Youn;Lee, Yun-Sang;Jeong, Jae Min
    • Journal of Radiopharmaceuticals and Molecular Probes
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    • v.4 no.2
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    • pp.80-84
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    • 2018
  • $[^{13}N]$Ammonia or $[^{13}N]NH_3$ is one of the most widely used PET tracer for the measurement of MBF. To produce $[^{13}N]NH_3$, devarda's alloy which contains aluminum, copper and zinc is used for the purpose of reduction from $^{13}N$-nitrate/nitrite to $[^{13}N]NH_3$. Since aluminum has neurotoxicity and renal toxicity, the amount of it should be carefully limited for the administration to the human body. Although USP and EP provide a way to identify the aluminum ion concentration, there are some difficulties to perform. Therefore, we tried to develop the modified method for verifying aluminum concentration of test solution. We compared color between test and standard solutions using chrome azurol S in pH 4.6 acetate buffer. We also tested color change of test and standard solutions according to pH, amounts and the order of reagent and time difference These results demonstrated that the color change of the solution can reflect quantitatively measure aluminum ion concentration. We hope the method is to be used effectively and practically in many sites where $[^{13}N]NH_3$ is produced.

Recovery of Ammonium Nitrogen and Phosphate from the Piggery Wastewater as Struvite and Its Assessment for the Reduction of Water Pollution Through the Field Test

  • Daeik Kim;Sun Jin Hwang;Su Ho Bae;Keon Sang Ryoo
    • Korean Journal of Environmental Agriculture
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    • v.42 no.2
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    • pp.83-92
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    • 2023
  • Excess N and P from the livestock manure applied to farmlands, have entered the water systems and poses a serious threat to the natural environment. Consequently, there has been recent awareness towards the management of livestock manure and its related fields. In this study, piggery wastewater was collected from a piggery in Pohang city, Korea. At 800℃, thermal decomposition of a natural stone, magnesite (MgCO3), yielded powered MgO with particle sizes ranging between 10 to 100 ㎛. Furthermore, NH4+-N and PO43--P were recovered as struvite precipitates from the piggery wastewater, by adjusting the pH with MgO and H3PO4. At pH 10, the recovery efficiencies of NH4+-N and PO43--P were found to be 86.1% and 94.1%, respectively. Using an X-ray Diffractometer (XRD), the struvite in the precipitate was confirmed to be consistent with standard pure struvite. Further, the purity of the struvite precipitate was analyzed using an energy dispersive X-ray (EDX) and thermal gravimetry-differential thermal analysis (TG-DTA), and found to be between 79.2% and 93.0%. Additionally, struvite-containing piggery wastewater and sawdust were mixed in a weight ratio of 2.5:1 and processed into a mature compost. The newly manufactured compost passed all quality standards required for first-class graded livestock composts. Moreover, this compost was sprayed directly onto the soil at the test site, and various parameters of the soil's effluent, such as total organic carbon (TOC), total nitrogen (T-N), total phosphorus (T-P), and dissolved oxygen (DO), were analyzed and measured. Based on these results, it is determined that the newly manufactured compost can more significantly reduce water pollution than commercial compost.

Radiometric examination of fertilizers and assessment of their health hazards, commonly used in Pakistan

  • Hannan Younis;Sumbilah Shafique;Zahida Ehsan;Aleena Ishfaq;Khurram Mehboob;Muhammad Ajaz;Abdullah Hidayat;Wazir Muhammad
    • Nuclear Engineering and Technology
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    • v.55 no.7
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    • pp.2447-2453
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    • 2023
  • The radioactivity concentrations of Naturally Occurring Radioactive Materials (NORM) i.e., 226Ra, 232Th, and 4K in various chemical fertilizers being used in the agricultural soil of Pakistan were determined utilizing gamma spectrometry by employing a High Purity Germanium (HPGe) detector. The radioactivity concentrations of 226Ra, 232Th, and 4K extended from 2.58 ± 0.8-265.7 ± 8.8 Bq kg-1, 1.53 ± 0.14-76.6 ± 1.07 Bq kg-1 and 36.5 ± 1.34-15606.7 ± 30.2 Bq kg-1 respectively. The radiological hazard parameters such as internal and external indices and annual effective dose rates were calculated, while excessive lifetime cancer risk factors for the indoor and outdoor areas were found in the range from 0.3×10-3 to 10.723×10-3 and 0.03×10-3 to 2.7948×10-3 of most fertilizers, however, some values were slightly higher than the UNSCEAR (The United Nations Scientific Committee on the Effects of Atomic Radiation) recommended values for potash-containing fertilizers such as MOP (Muriate of Potash).