• Advances in environmental research
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• 제7권2호
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• pp.73-85
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• 2018

The anaerobically digestion and agricultural application of organic wastes was conducted using food wastes and cow dung. Twenty kilograms each of the feed stocks was added into two 30 liters-capacity batch digesters. The anaerobic digestion was carried out within a temperature range of $25-31^{\circ}C$ for a retention time of 51 days. The results showed a cumulative gas yield of 5.0 bars for food waste and no gas production for cow dung within the retention time. Bacteria such as Escherichia coli, Staphylococcus aureus, Pseudomonas aeruginosa, Proteus vulgaris and Clostridium sp were isolated. Fungi isolated included Aspergillus niger, Aspergillus nidulan, Trichophyton rubrum and Epidermophyton flocossum. The non-dispersive infrared (NDIR) analysis of the biogas produced confirmed that the gas consisted of $CH_4$, $CO_2$ and $H_2$. Statistical analysis revealed there was no significant correlation between temperature and biogas produced from the organic wastes (r= 0.177, p = 0.483).The organic wastes from the biogas production process stimulated maize growth when compared to control (soil without organic waste) and indicated maximum height. The study therefore reveals that food waste as potential substrates for biogas production has a moderate bio-fertilizer potential for improving plant growth and yield when added to soil.

• 한국식물병리학회지
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• 제14권3호
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• pp.260-267
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• 1998

This study was undertaken to find a new formulation of soil amendment, and selection of antogonists and to effectively control brown and large patch of turfgrasses caused by Rhizoctoniz solani AG1-1 and AG 2-2. Fourteen inorgainc chemicals (1%, w/w) were added individually in vitro, and some chemicals showed suppressiveness to R. solani. Alum suppressed effectively mycelial growth of R. solani in the range of 17 to 77% as compared with control. The four chemicals such as Al2(SO4)3, alum, CaO, and NH4NO3 were finally selected. Out of three organic compounds, composted pine bark (CPB) showed prominent suppressive effect as compared with milled alfalfa and pine leaves. After inoculation of R. solani isolates AG-1 and AG2-2 on the turf seedlings, water soaked lesions and blight symptoms were developed on the whole seedlings. According to inhibition zone method, mycelial growth of the fungus were greatly suppressed by culture filterates of the antagonists, Gliocladium virens (Gl1-) and Pseudomonas sp. (P713). CPB soil amendment mixed with antagonists (1% w/w) controlled not only brown and large patch of turfgrasses, but also promote the good growth of the seedlings. In addition, the controlling effect was maintained more than 30 days. Especially, the controlling effect of two antagonists was similar to Cㅖㅠ soil amendment with the antagonists and also stimulated a favorable growth of the seedlings. Therefore, its is expected that continuous control of Rhizoctonia blight of turfgrasses can be obtained in field by subsequent applications of the antagonists.

• Preventive Nutrition and Food Science
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• 제9권2호
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• pp.138-143
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• 2004

Soybean curd residues (SCR) obtained from hot and cold manufacturing processes were fermented by indigenous microorganisms, Lactobacillus rhamnosus LS and Bacillus firmus NA-l for 15 h at 37$^{\circ}C$. The pH, acidity, viable cell counts, and tyrosine content were evaluated in samples with variations in sugar, starter and type of SCR. The raw Doowon SCR (D-SCR, cold-processed) fermented by indigenous microorganism had a 0.9% acidity and 6.7 ${\times}$ 10$^{7}$ CFU/g viable cell counts, compared with the 0.11 % acidity and 6.7 ${\times}$ 10$^{6}$ CFU/g viable cell counts of raw fermented Pulmuwon SCR (P-SCR, hot-processed). After fermentation of raw P-SCR with 1 % glucose and 1 % L. rhamnosus LS starter, the viable cell counts, tyrosine content and acidity were 4.7 ${\times}$ 10$^{8}$ CFU/g, 16.3 mg% and 0.9%, respectively. In addition, the raw P-SCR fermented with Bacillus firmus NA-l as co-starter had a 0.45% acidity, 2.4 ${\times}$ 10$^{8}$ CFU/g lactic acid bacteria, and 3.3 ${\times}$ 10$^{6}$ CFU/g Bacillus sp. In particular, the tyrosine content was increased 5 fold. The drying of fermented SCR was completed by hot-air drying (5$0^{\circ}C$) within 12 h; the dried P-SCR and D-SCR had 1.8 ${\times}$ 10$^{7}$ CFU/g and 5.3 ${\times}$ 10$^{6}$ CFU/g viable cell counts, respectively. The concentrate of methanol extract from fermented D-SCR inhibited the initial cell growth of E. coli, Staphylococcus aureus and Pseudomonas aeruginosa in liquid culture.

• 한국토양비료학회지
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• 제50권3호
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• pp.135-149
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• 2017

In order to obtain promising rice growth-promoting microbial strains that can be used as substitutes for chemical fertilizers, 172 bacterial strains were isolated from rice roots grown in Korean and Russian soils. Out of them, the strains KR076, KR083, KR181 and RRj228 showed plant growth-promoting activities on maize seedlings. Bacillus megaterium KR076 and Bacillus sp. KR083 showed both nitrogen-fixing and plant growth-promoting activities, while Rhizobium sp. KR181 and Pseudomonas sp. RRj228 appeared to support only plant growth-promotion, but not $N_2$ fixation. Especially, RRj228 showed high growth promoting activity at low concentrations. Inoculation studies with KR083 and RRj228 revealed a high affinity to the Japonica rice variety such as Junambyeo than the Korean Tongil type variety such as Arumbyeo. Both KR083 and RRj228 strains showed rhizoplane and/or endophytic colonization in Japonica and Tongil types rice when soaked with the bacterial suspension of $1.1{\times}10^5cfu\;ml^{-1}$ for six and twelve hours. However, the total bacterial cell numbers were higher in the roots of Japonica variety than in the Tongil type. In inoculation trials with Daesanbyeo rice variety, the seedlings inoculated with KR181 and RRj228 at the rate of $2.0{\times}10^6cfu\;ml^{-1}$ showed yield increment of 35% and 33% (p < 0.01), respectively, so that they contributed to the replacement of chemical fertilizer at half doses of N, $P_2O_5$, and $K_2O$ in pots. In Junambyeo rice seedlings, the strain RRj228, when inoculated with a cell suspension of $1.8{\times}10^6cfu\;ml^{-1}$, promoted 3.4% higher yield at 70% dose than at a full dose level of N $110kg\;ha^{-1}$ in field. These results suggest that the rhizobacteria KR181 and RRj228 are prospective strains for enhancing rice performance.

• 한국식품과학회지
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• 제43권4호
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• pp.446-452
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• 2011

항균활성을 나타내는 야생형 유산균을 분리 동정하기 위하여 김치에서 480종의 유산균을 분리하였으며, S. enterica serovar Typhimurium, P. aeruginosa, B. subtilis에 대한 항균활성을 agar diffusion 법을 사용하여 검사하였다. 이들 중 항균활성을 나타내는 균주 340종에 대하여 multiplex PCR과 API 50CHL Kit을 이용한 생화학적 특성검사 및 16S rDNA sequencing을 통해 Lb. plantarum 169균주, Lb. fermentum 20균주, Lb. paracasei spp. paracasei 2균주, Lactobacillus 속 2균주와 Pediococcus 속 15균주를 동정하였다. 이들 균주 중 Lb. fermentum의 경우는 프로바이오틱스로서의 활성이 보고되고 있는 균으로 추가적인 연구가 필요하다고 사료된다.

• 한국토양비료학회지
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• 제37권2호
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• pp.116-123
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• 2004

유기재배를 위한 화학비료 대체 혼합발효 유기질비료를 개발하기 위하여 깻묵, 어박, 쌀겨, 골분 등의 유기질 자재와 일라이트, 패화석 등을 배합하여 제조하였으며 70일간의 제조과정 중 이화학적 특성 및 미생물 밀도 변화를 조사하였다. 유기질비료의 주요 성분인 깻묵과 쌀겨는 각각 7.6%와 2.6%의 질소와 3.6%와 4.6%의 인산, 1.4%와 2.2%의 칼륨을 함유하였다. 골분은 29.2%의 인산을 함유하였으며 일라이트의 칼륨 농도는 3.8%이였다. 유기질비료의 온도는 혼합 2일후 $50^{\circ}C$ 이상으로 상승하였으며 발효 40일 경과 후 상온과 비슷한 온도로 내려갔다. 발효 초기 수분 함량은 36.3%였으며 1개월 후 16.0%로 감소하였고 그 후 변화가 거의 없었다. 발효 초기에 유기물 함량에 비해 질소의 손실이 커서 탄질비가 증가하였다가 발효 10일 경과 후 서서히 감소하였다. 암모니아태 질소 함량은 혼합 시 $1,504mg\;kg^{-1}$이었으며 10일 후 최고 농도인 $5,530mg\;kg^{-1}$까지 증가하였다가 서서히 감소하였다. 그 반면에 질산태질소 함량은 발효 전 기간 동안 저농도로 유지되었는데 이러한 경향은 높은 pH와 관련이 있다고 판단되었다. 약 2개월간의 발효 후 유기질비료의 질소, 인산, 칼리 및 유기물 함량은 각각 2.7%, 2.8%, 1.8% 및 35.9%이었다. 발효과정 중 유기질비료내 생존하는 호기성세균, Bacillus sp. 및 방선균의 총균수는 각각 $12.5{\times}10^{10}$, $45.5{\times}10^5$와 $13.6{\times}10^5cfu\;g^{-1}$이었다. Pseudomoaas sp.는 발효초기에 $71.9{\times}10^7cfu\;g^{-1}$이었으나 발효 20일 후에는 온도 상승으로 급격히 감소하여 거의 나타나지 않았다. 균류 중 효모는 발효 초기에 많이 검출되었으며 사상균수은 발효 후기에 많았다.

• Journal of Microbiology and Biotechnology
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• 제25권11호
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• pp.1880-1893
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• 2015

In this study, Pseudomonas R0-14, which was isolated from Arctic soil samples, showed a clear halo when grown on M9 medium agarose plates containing olive oil-rhodamine B as substrate, suggesting that it expressed putative lipase(s). A putative lipase gene, lipR, was cloned from R0-14 by genome walking and Touchdown PCR. lipR encodes a 562-amino-acid polypeptide showing a typical α/β hydrolase structure with a catalytic triad consisting of Ser₁₅₃-Asp₂₀₂-His₂₆₀ and one α-helical lid (residues 103-113). A phylogenetic analysis revealed that LipR belongs to the lipase subfamily I.3. LipR was successfully expressed in Escherichia coli, purified, and biochemically characterized. Recombinant LipR exhibited its maximum activity towards p-nitrophenyl butyrate at pH 8.5 and 60℃ with a K_m of 0.37 mM and a k_cat of 6.42 s^-1. It retained over 90% of its original activity after incubation at 50℃ for 12 h. In addition, LipR was activated by Ca²⁺, Mg²⁺, Ba²⁺, and Sr²⁺, while strongly inhibited by Cu²⁺, Zn²⁺, Mn²⁺, and ethylenediaminetetraacetic acid. Moreover, it showed a certain tolerance to organic solvents, including acetonitrile, isopropanol, acetone, methanol, and tert-butanol. When algal oil was hydrolyzed by LipR for 24 h, there was an enrichment of n-3 long-chain polyunsaturated fatty acids, including eicosapentaenoic acid (1.22%, 1.65-fold), docosapentaenoic acid (21.24%, 2.04-fold), and docosahexaenoic acid (36.98%, 1.33-fold), and even a certain amount of diacylglycerols was also produced. As a result, LipR has great prospect in industrial applications, especially in food and/or cosmetics applications.

• Animal cells and systems
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• 제3권2호
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• pp.221-228
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• 1999

In order to find a biochemical marker for late Iysosomes, we characterized two cDNAs which were cloned by using a monoclonal antibody (mAb) against Iysosomes in Amoeba proteus as a probe. The two cDNAs, a 1.3-kb cDNA in pBSK-Iys45 and a 1.6-kb cDNA in pBSK-Iys60, were found to encode proteins homologous to pepstatin-insensitive carboxyl proteinases (PICPs). E. coli transformed with pBSK-Iys45 produced two immunopositive polypeptides (45 and 43 kDa) and the cDNA in 1274 bases encoded a 44,733-Da protein (Lys45) of 420 amino acids containing one site for a core oligosaccharide. On the other hand, E. coli transformed with pBSK-Iys60 produced several polypeptides (64, 54, 45, 41, and 37 kDa) reacting with the mAb. The cDNA contained 1629 bases and encoded a 59,231-Da protein (Lys60) of 530 amino acids containing two sites for asparagine-linked core oligosaccharides. These two cDNAs showed identities of 60.3% in nucleotide sequences and 23.6% in amino acid sequences. Lys45 and Lys60 appeared to share XXEFQK as a common antigenic domain. The amino acid sequence of the Lys45 protein showed 17.4% identity and 40.9% similarity to that of PICP from Pseudomonas sp. 101. On the other hand, Lys60 showed a 24.3% identity and 51.9% similarity with human Iysosomal PICP in the amino acid sequence. A putative active center for serine protease, GTS＊xxxxxFxG, was found to be conserved among PICP homologues. The two PICPs are the first reported enzymatic markers for late Iysosomes.

• 한국어류학회지
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• 제29권1호
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• pp.62-68
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• 2017

본 연구에서는 명태 양식 기술 개발 과정 중 수산생물 병원체의 영향을 알아보고자 사육수 내 총 세균수 변화, 분포와 명태에 대한 영향을 분석하였으며, 성장 단계별 명태의 병원체(세균, 기생충 및 바이러스) 조사 및 비정상 개체 발생에 대한 원인 구명을 수행하였다. 자어 단계에서 사육수의 평균 세균수는 $2.11{\times}10^3cfu/mL$로 나타났으며, 비브리오균이 52%로 가장 높게 분포하였다. 치어 및 미성어 단계에서 사육수의 세균수는 $3.43{\times}10^3cfu/mL$(슈도모나스균 90% 분포) 그리고 성어 단계에서는 $3.2{\times}10^2cfu/mL$(슈도모나스 52%)로 나타났다. 명태 사육수 세균총의 변화는 먹이생물의 종류, 공급 및 잔류량에 의해 영향을 받는 것으로 판단된다. 외관상 건강한 개체에서는 대량 폐사를 일으킬 수 있는 세균, 바이러스가 검출되지 않았으나, 일부 안구돌출, 턱 주변 조직 출혈을 보이는 비정상 개체에서 아가미 새변의 기포 형성, 각막 조직 및 맥락막 주변 조직 괴사가 관찰되었다. 특히, 병변 부위에서 검출된 세균(P. fluorescens, Vibrio sp., V. pelagius, Planococcus maritumus 그리고 Pseudoalteromonas sp.)이 사육수에도 동일하게 분포하였으며, 사육 과정 중 외상 발생 이후 2차 세균 감염이 발생할 수 있음을 시사한다. 명태의 안정적인 양식 산업화를 위한 요소로 기초 질병 데이터 구축과 더불어 지속적인 질병관리가 필요하다.

• 미생물학회지
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• 제49권3호
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• pp.245-252
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• 2013

녹농균과 아시네토박터 바우마니는 병원에서 중요한 기회감염 균주이며 대부분의 항생제에 내성이다. 다제내성 녹농균(MDRPA)과 아시네토박터 바우마니(MDRAB)는 심각한 원내 감염을 일으키고 메티실린 내성 황색포도상구균(MRSA) 보다 치료가 어렵다. 비피도박테리아는 많은 유익한 프로바이틱스 중 하나로 그들의 항균활성에 대한 많은 연구가 이루어져 왔다. 본 연구에서는 한국인으로부터 분리한 비피도박테리움 속 균주들의 MDRPA와 MDRAB에 대한 항균활성을 조사하였다. 시프로플록사신, 토브라마이신, 겐타마이신, 메로페넴과 세프타지딤에 내성을 보이는 MDRPA와 MDRAB에 대한 비피도박테리움 속 균주들의 항균활성은 흡광도를 이용한 액체배지희석법에 의해 측정되었다. 모든 비피도박테리아 분리균주(비피도박테리움 어돌레센티스 9균주, 비피도박테리움 롱검 3균주와 비피도박테리움 슈도카테눌라툼 2균주) 중 비피도박테리움 슈도카테눌라툼 SPM1309의 배양 상등액은 MDRPA와 MDRAB에 대한 강한 증식 억제 효과를 보여주었다. 배양 시간 동안 혼합액의 탁도는 변화되지 않았으며, 이 억제 효과는 정균 작용이었다. 게다가 항균활성은 분자량 10 kDa 미만의 분획물에서 나타났으며, $70^{\circ}C$에서 10분간 열처리 한 후에서 항균활성이 유지되었기 때문에 활성물질은 열에 안정하였다. 본 연구결과는 MDRPA와 MDRAB 감염증의 대체치료법을 위한 비피도박테리움 슈토카테눌라툼 SPM1309의 잠재적인 가능성을 보여준다.