• Title/Summary/Keyword: Population structure

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Sex Ratio, Imposex and Penis Morphology of the Four Intertidal Muricid Species (Thais clavigera, T. luteostoma, Ceratostoma rorifluum & Ocinerberllus inornatum) (Mollusca: Gastropoda: Muricidae) in the Korean Coasts

  • Son, Min-Ho;Hong, Sung-Yun
    • Proceedings of the Korean Society of Fisheries Technology Conference
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    • 2000.05a
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    • pp.375-376
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    • 2000
  • Sex ratio of a population is a key factor to determine reproductive rate of the population. If the population has skewed sex ratio to the male, the population size may decline gradually at an area which it inhabits, and, furthermore, if a species plays an ecologically important role in its community (e.g., a keystone species in Paine, 1966), its potential reproductive rate will be to form a characterized community because community structure is strongly influenced by the abundance of the ecologically important species (Hughes, 1986). A number of workers (e.g., Bryan et al., 1986 in Nucella lapillus; Spence et al., 1990 in Thais haemastoma) suggested that high frequency and/or late stage of imposex might affect the female mortality and normal reproduction adversely. Consequently, the imposex could affect sex ratio of natural population of some neogastropod including thaisid species. (omitted)

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Parallel Genetic Algorithm for Structural Optimization on a Cluster of Personal Computers (구조최적화를 위한 병렬유전자 알고리즘)

  • 이준호;박효선
    • Proceedings of the Computational Structural Engineering Institute Conference
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    • 2000.10a
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    • pp.40-47
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    • 2000
  • One of the drawbacks of GA-based structural optimization is that the fitness evaluation of a population of hundreds of individuals requiring hundreds of structural analyses at each CA generation is computational too expensive. Therefore, a parallel genetic algorithm is developed for structural optimization on a cluster of personal computers in this paper. Based on the parallel genetic algorithm, a population at every generation is partitioned into a number of sub-populations equal to the number of slave computers. Parallelism is exploited at sub-population level by allocationg each sub-population to a slave computer. Thus, fitness of a population at each generation can be concurrently evaluated on a cluster of personal computers. For implementation of the algorithm a virtual distributed computing system in a collection of personal computers connected via a 100 Mb/s Ethernet LAN. The algorithm is applied to the minimum weight design of a steel structure. The results show that the computational time requied for serial GA-based structural optimization process is drastically reduced.

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ASSESSING CALIBRATION ROBUSTNESS FOR INTACT FRUIT

  • Guthrie, John A.;Walsh, Kerry B.
    • Proceedings of the Korean Society of Near Infrared Spectroscopy Conference
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    • 2001.06a
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    • pp.1154-1154
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    • 2001
  • Near infra-red (NIR) spectroscopy has been used for the non-invasive assessment of intact fruit for eating quality attributes such as total soluble solids (TSS) content. However, little information is available in the literature with respect to the robustness of such calibration models validated against independent populations (however, see Peiris et al. 1998 and Guthrie et al. 1998). Many studies report ‘prediction’ statistics in which the calibration and prediction sets are subsets of the same population (e. g. a three year calibration validated against a set from the same population, Peiris et al. 1998; calibration and validation subsets of the same initial population, Guthrie and Walsh 1997 and McGlone and Kawano 1998). In this study, a calibration was developed across 84 melon fruit (R$^2$= 0.86$^{\circ}$Brix, SECV = 0.38$^{\circ}$Brix), which predicted well on fruit excluded from the calibration set but taken from the same population (n = 24, SEP = 0.38$^{\circ}$Brix with 0.1$^{\circ}$Brix bias), relative to an independent group (same variety and farm but different harvest date) (n = 24, SEP= 0.66$^{\circ}$ Brix with 0.1$^{\circ}$Brix bias). Prediction on a different variety, different growing district and time was worse (n = 24, SEP = 1.2$^{\circ}$Brix with 0.9$^{\circ}$Brix bias). Using an ‘in-line’ unit based on a silicon diode array spectrometer, as described in Walsh et al. (2000), we collected spectra from fruit populations covering different varieties, growing districts and time. The calibration procedure was optimized in terms of spectral window, derivative function and scatter correction. Performance of a calibration across new populations of fruit (different varieties, growing districts and harvest date) is reported. Various calibration sample selection techniques (primarily based on Mahalanobis distances), were trialled to structure the calibration population to improve robustness of prediction on independent sets. Optimization of calibration population structure (using the ISI protocols of neighbourhood and global distances) resulted in the elimination of over 50% of the initial data set. The use of the ISI Local Calibration routine was also investigated.

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Accurate Estimation of Effective Population Size in the Korean Dairy Cattle Based on Linkage Disequilibrium Corrected by Genomic Relationship Matrix

  • Shin, Dong-Hyun;Cho, Kwang-Hyun;Park, Kyoung-Do;Lee, Hyun-Jeong;Kim, Heebal
    • Asian-Australasian Journal of Animal Sciences
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    • v.26 no.12
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    • pp.1672-1679
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    • 2013
  • Linkage disequilibrium between markers or genetic variants underlying interesting traits affects many genomic methodologies. In many genomic methodologies, the effective population size ($N_e$) is important to assess the genetic diversity of animal populations. In this study, dairy cattle were genotyped using the Illumina BoviveHD Genotyping BeadChips for over 777,000 SNPs located across all autosomes, mitochondria and sex chromosomes, and 70,000 autosomal SNPs were selected randomly for the final analysis. We characterized more accurate linkage disequilibrium in a sample of 96 dairy cattle producing milk in Korea. Estimated linkage disequilibrium was relatively high between closely linked markers (>0.6 at 10 kb) and decreased with increasing distance. Using formulae that related the expected linkage disequilibrium to $N_e$, and assuming a constant actual population size, $N_e$ was estimated to be approximately 122 in this population. Historical $N_e$, calculated assuming linear population growth, was suggestive of a rapid increase $N_e$ over the past 10 generations, and increased slowly thereafter. Additionally, we corrected the genomic relationship structure per chromosome in calculating $r^2$ and estimated $N_e$. The observed $N_e$ based on $r^2$ corrected by genomics relationship structure can be rationalized using current knowledge of the history of the dairy cattle breeds producing milk in Korea.

Population Projection and"0" Growth Population of Korea (우리나라의 장래 인구전망과 <0>성장인구추계)

  • 김태헌;장영식
    • Korea journal of population studies
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    • v.17 no.1
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    • pp.1-16
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    • 1994
  • Since 1962, the population growth control has been one of the most important aims in the 5-Year So-cioeconomic Development Plans of Korea. The annual population growth rate has dropped to tess than 1 percent in 1990 from about 3 percents in 1960s, and projected to reach to $\ulcorner$0$\urcorner$ percent in 2021. From 2021, Korean population will decrease and the age structure will be distorted because birth rate will drop suddenly and continuously. Thus, we can consider $\ulcorner$0$\urcorner$ growth population for minimizing the prob- lems on the decreasing population. To discuss the problems caused from the changes of population size and age- sex composition, we projected three kinds of population including two kinds of $\ulcorner$0$\urcorner$ growth population under different as- sumptions. The first is the population which extended the projection of National Statistical Office up to 2090. Because the TFR is assumed and fixed as low as 1.63 after 1990, the population growth rate will be under $\ulcorner$0$\urcorner$ in 2021 and drop by about 1 percent every year from around 2050. This population trend results to old age population : 38.1 of old- age dependency ratio and 46.5 years of median age. The second is the population which the size in 2021 projected by the NOS continues after 2021. To change over from the decreasing population after 2021 to the $\ulcorner$0$\urcorner$ growth one, the TFR should be in-creased up to over 3.0 in 2040-2050, which fertility level would be too high to be accepted. The third is the population which approaches to the $\ulcorner$0$\urcorner$ growth population under the assumptions that the TFR increases from 1.63 to 2.1 in the period of 2010-2030 and then the same level continues. Although the maximum population size reaches 51, 503 thousand persons, the population will approach to the stationary population with about 42.4 million persons around 2090. In this projected population there is no more serious problems on population composition, on the rapid decrease of population, and on the increase TFR level. When the $\ulcorner$0$\urcorner$ growth population continues the problems of over population caused by the populationincrease wou]d be minimized, and the problems of unusual age composition resulted from the popula-tion decrease would not be found any more. Furthermore, when the changes of population size and composition is continuing slowly, the factors of population would effect moderately to socioeconomic development and help social changes. Therefore, with the attention of the present population changes, we should adapt new and detailde population policy which is able to get the $\ulcorner$0$\urcorner$ growth population.

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A Co-Evolutionary Approach for Learning and Structure Search of Neural Networks (공진화에 의한 신경회로망의 구조탐색 및 학습)

  • 이동욱;전효병;심귀보
    • Proceedings of the Korean Institute of Intelligent Systems Conference
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    • 1997.10a
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    • pp.111-114
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    • 1997
  • Usually, Evolutionary Algorithms are considered more efficient for optimal system design, However, the performance of the system is determined by fitness function and system environment. In this paper, in order to overcome the limitation of the performance by this factor, we propose a co-evolutionary method that two populations constantly interact and coevolve. In this paper, we apply coevolution to neural network's evolving. So, one population is composed of the structure of neural networks and other population is composed of training patterns. The structure of neural networks evolve to optimal structure and, at the same time, training patterns coevolve to feature patterns. This method prevent the system from the limitation of the performance by random design of neural network structure and inadequate selection of training patterns. In this time neural networks are trained by evolution strategies that are able to apply to the unsupervised learning. And in the coding of neural networks, we propose the method to maintain nonredundancy and character preservingness that are essential factor of genetic coding. We show the validity and the effectiveness of the proposed scheme by applying it to the visual servoing of RV-M2 robot manipulators.

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A Study on the Application of Building Population Weighting to ERAM Model Based on GIS Data (GIS 데이터에 기반한 건물인구 가중치 적용 ERAM 모델에 관한 연구)

  • Mun, Sunghoon;Piao, Gensong;Choi, Jaepil
    • Journal of the Architectural Institute of Korea Planning & Design
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    • v.35 no.1
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    • pp.47-54
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    • 2019
  • This study proposes a new ERAM model with building population weighting. Previous studies of applying weightings on ERAM model on the scale of urban space were focused on the relationship between the street and the human behavior. However, this study focuses on the influences that buildings give to human behavior and develops a building population weighted ERAM model. This research starts by analyzing ERAM model to its basic compositions, which are adjacency matrix and row vector. It applies building population weighting to the row vector, while previous studies put weightings in the adjacency matrix. Building population weighted ERAM model calculates the building population weighting based on GIS data, which provides objective and massive data of buildings in the urban scale. For the verification of the model, Insa-dong and Myeong-dong were analyzed with both ERAM model and building population weighted ERAM model. The results were analyzed through the correlation test with actual pedestrian population data of the two districts. As a result, the explanation ability of building population weighted ERAM model for the pedestrian population turned out to be higher than the ERAM model. Since building population weighted ERAM model has the structure that can be combined with other weighted ERAM models, it is expected to develop a multi-weighted ERAM model with better explanation ability as a further study.

Microsatellite Markers for Non-Invasive Examination of Individual Identity, Genetic Variation, and Population Differentiation in Two Populations of Korean Long-Tailed Goral (Naemorhedus caudatus)

  • Kim, Baek-Jun
    • Proceedings of the National Institute of Ecology of the Republic of Korea
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    • v.3 no.4
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    • pp.191-198
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    • 2022
  • Natural habitats of the Korean long-tailed goral (Naemorhedus caudatus) have been fragmented by anthropogenic activities in South Korea in the last decades. Here, the individual identity, genetic variation, and population differentiation of the endangered species were examined via the multiple-tube approach using a non-invasive genotyping method. The average number of alleles was 3.16 alleles/locus for the total population. The Yanggu population (1.66) showed relatively lower average number of alleles than the Inje population (3.67). Of the total 19 alleles, only seven (36.8%) alleles were shared by the two populations. Using five polymorphic out of six loci, four and six different goral individuals from the captive Yanggu (n=24) and the wild Inje (n=28) population were identified, respectively. The allele distribution was not identical between the two populations (Fisher's exact test: P<0.01). A considerably low migration rate was detected between the two populations (no. of migrants after correction for size=0.294). Additionally, the F statistics results indicated significant population differentiation between them, however, quite low (FST=0.327, P<0.01). The posterior probabilities indicated that the two populations originated from a single panmictic population (P=0.959) and the assignment test results designated all individuals to both populations with nearly equal likelihood. These could be resulted from moderate population differentiation between the populations. No significant evidence supported recent population bottleneck in the total Korean goral population. This study could provide us with useful population genetic information for conservation and management of the endangered species.

Population genetic structure analysis and effect of inbreeding on body weights at different ages in Iranian Mehraban sheep

  • Yavarifard, Roya;Hossein-Zadeh, Navid Ghavi;Shadparvar, Abdol Ahad
    • Journal of Animal Science and Technology
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    • v.56 no.8
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    • pp.31.1-31.9
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    • 2014
  • The objective of this study was to describe the population structure and inbreeding, and to quantify their effects on weights at different ages of Mehraban sheep in Iran. The analysis was based on the pedigree information of 26990 animals and 10278 body weight records from birth to yearling age. Data and pedigree information were collected during 1994 to 2011 by the breeding station of Mehraban sheep. The population structure was analyzed using the CFC program. Inbreeding of all animals was calculated by INBUPGF90 program. All animals were grouped into three classes according to their inbreeding coefficients: the first class included non-inbred animals (F=0); and the second and third classes included inbred animals (0$F{\geq}0.05$, respectively). The average inbreeding in Mehraban sheep was 1.69%. Founder equivalent ($f_e$) values were estimated to be 4244, 3116 and 2965 during 1994-1999, 2000-2005 and 2006-2011, respectively. The effective population sizes ($N_e$) were 363, 5080 and 5740 during 1994-1999, 2000-2005 and 2006-2011, respectively. Generation interval was 2.15 years for this breed of sheep. Regression coefficients of birth weight, 3-month weight, 6-month weight and yearling weight on lamb inbreeding were estimated to be -6.340.69, -14.685.33, 48.009.43 and 98.6515.65, respectively. Both positive and negative inbreeding effects were found in the current study. The utilization of a program for designed mating system, in the present flock, could be a suitable approach to keep the level of inbreeding under control.

A Study on the Changing of Housing Construction in Jeju-do by Statistical Data (통계자료를 기반으로 한 제주도 주택건축의 변화에 관한 연구)

  • Hwang, Yong-Woon
    • Korean Institute of Interior Design Journal
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    • v.24 no.6
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    • pp.13-21
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    • 2015
  • The purpose of this study is to analyze the changing housing construction in Jeju-do which is composed of two cities(Jeju-si, Seogwipo-si). The number of indigenous population and migrating population of Jeju-do has been increasing every year because it has more beautiful scenery, interesting culture and a higher ratio of natural green area to urban area than other provinces(inland). More than 70% of population in Jeju-si is concentrated in dong-area. As a result, urban area and commercial area are expanding in entire Jeju-do. On the other hand, green area and non-urban area of Jeju-do are decreasing steadily. And there was a lot of changing during a short of time after 2010 because of internationalization and urban development etc.. This study is an analysis about the changing of housing in Jeju-do by statistical data. As a results of the analysis. I discovered that 1) The supply ratio of available housing in Jeju-do is higher than other inland cities in other parts of the country. 2) Housing constructing is influenced by moving-in and moving-out population. 3) There are more detached houses in Jeju-do than apartments. The opposite phenomenon occurs in other provinces (inland cities). However, the number of detached houses is gradually declining in Jeju-do since 2000. 4) Most detached homes in Jeju-do have an area of $60m^2{\sim}90m^2$. Most apartments have smaller areas than $60m^2{\sim}90m^2$. Seogwipo has homes with a larger area than Jeju-si. 5) The ratio of concrete structure houses is increasing at high speed because of constructing of apartment buildings, on the other hand, the ratio of brick structure house is decreasing gradually. Finally, Even though Jeju-do has different from housing culture of inland, it is changing slowly like inland housing types.