• 제목/요약/키워드: Phenotypic trait

검색결과 198건 처리시간 0.021초

Quantitative Trait Loci Affecting Rous Sarcoma Virus Induced Tumor Regression Trait in F2 Intercross Chickens

  • Uemoto, Y.;Saburi, J.;Sato, S.;Odawara, S.;Ohtake, T.;Yamamoto, R.;Miyata, T.;Suzuki, K.;Yamashita, H.;Irina, C.;Plastow, G.;Mitsuhashi, T.;Kobayashi, E.
    • Asian-Australasian Journal of Animal Sciences
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    • 제22권10호
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    • pp.1359-1365
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    • 2009
  • We performed a genome-wide linkage and quantitative trait locus (QTL) analysis to confirm the existence of QTL affecting Rous Sarcoma Virus (RSV) induced tumor regression, and to estimate their effects on phenotypic variance in an F2 resource population. The F2 population comprised 158 chickens obtained by crossing tumor regressive White Leghorn (WL) and tumor progressive Rhode Island Red (RIR) lines was measured for tumor formation after RSV inoculation. Forty-three tumor progressive and 28 tumor regressive chickens were then used for genome-wide linkage and QTL analysis using a total of 186 microsatellite markers. Microsatellite markers were mapped on 20 autosomal chromosomes. A significant QTL was detected with marker LEI0258 located within the MHC B region on chromosome 16. This QTL had the highest F ratio (9.8) and accounted for 20.1% of the phenotypic variation. Suggestive QTL were also detected on chromosomes 4, 7 and 10. The QTL on chromosome 4 were detected at the 1% chromosome-wide level explaining 17.5% of the phenotypic variation, and the QTLs on chromosome 7 and 10 were detected at the 5% chromosome-wide level and explained 11.1% and 10.5% of the phenotypic variation, respectively. These results indicate that the QTLs in the non-MHC regions play a significant role in RSV-induced tumor regression. The present study constitutes one of the first preliminary reports in domestic chickens for QTLs affecting RSV-induced tumor regression outside the MHC region.

넙치의 사료공급과 절식시 성장과 표현형질 특징 (Effect of Feeding and Starvation on Growth and Phenotypic Trait in Olive Flounder, Paralichthys olivaceus (Temminck et Schlegel))

  • 박인석;우선랑;김은미;조성환
    • 한국양식학회지
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    • 제19권3호
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    • pp.183-187
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    • 2006
  • 넙치, Paralichthys olivaceus (Temminck et Schlegel)에서 급이와 절식이 생존과 성장 및 표현형질에 미치는 영향을 파악하기 위해 12주에 걸친 급이와 절식 실험을 수행하였다. 실험 기간중 절식군의 생존율은 급이군에 비해 낮았다. 기아는 비만도, 일일성장률, 체중 성장률 및 실험 종료시 체중에서의 감소를 보이는 성장 저해를 나타낸 반면, 급이군은 지속적이고 양호한 성장을 보였다. 절식군은 급이군에 비하여 유사한 dressing비와 내장괴지수를 보였으며, 낮은 내장괴제거 체중을 보였다(P<0.05). 본 연구 결과, 급이와 절식 파악에 사용된 표현형질은 본 종의 영양 상태 확인의 지표로 유용하며, 넙치 표본시의 성장 시기 평가 결정에 유용하리라 사료된다.

Genetic Parameters and Annual Trends for Birth and Weaning Weights of a Northeastern Thai Indigenous Cattle Line

  • Intaratham, W.;Koonawootrittriron, S.;Sopannarath, P.;Graser, H.-U.;Tumwasorn, S.
    • Asian-Australasian Journal of Animal Sciences
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    • 제21권4호
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    • pp.478-483
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    • 2008
  • Records of a Northeastern Thai indigenous cattle line population were used to estimate genetic parameters and annual trends for calf weights. The data set comprised records of 1,922 and 1,489 animals for birth and weaning weight, respectively born from 1993 to 2004. A bivariate analysis was carried out for variance and covariance components estimations using average information restricted maximum likelihood procedure. Average estimated breeding value and maternal breeding value of the animals born in 1993 were set to zero as a base group. Genetic trends of each trait were calculated by regressing average estimated breeding values and maternal breeding values on birth year of calves. Phenotypic trends for each trait were calculated by regressing the yearly adjusted weight on birth year of calves. The results revealed that the estimate of direct heritability, maternal heritability and maternal permanent environmental variance as a proportion of phenotypic variance for birth and weaning weight was 0.40, 0.14 and 0.04; 0.27, 0.05 and 0.23, respectively. Direct heritability was moderately heritable and genetic improvement through selection can be achieved. The estimate of phenotypic, direct genetic, maternal genetic and maternal permanent environmental correlation between birth and weaning weight was 0.48, 0.65, 0.98 and 0.73, respectively. The phenotypic trend, genetic trends of estimated breeding value and maternal breeding value for birth weight was 0.18, 0.04 and 0.01 kg/year, respectively. The phenotypic trend, genetic trends of estimated breeding value and maternal breeding value for weaning weight was -1.36, 0.32 and 0.03 kg/year, respectively. As maternal genetic effect was considerably less important than direct genetic effect, selection for improved weaning weight of this Northeastern Thai indigenous cattle line can place more emphasis on the direct genetic effect.

Variation in Phenotypic Traits in Onion (Allium cepa L.) Germplasm Collections

  • Binod Prasad Luitel;JiWon Han;Myeong Cheoul Cho;Min-Seon Choi
    • 한국자원식물학회지
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    • 제36권3호
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    • pp.237-255
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    • 2023
  • Variations in phenotypic traits are important for onion genetic improvement. The aim of this study was to identify the phenotypic traits of temporary genetic resources and the best accessions for the development of onion breeding programs. Sixteen phenotypic traits of 79 onion accessions were studied. The descriptive statistics of phenotypic traits exhibited a high variation in onion accessions. Among the 79 evaluated accessions, 64.55% had a large bulb neck width and 44.30% had a circular bulb shape. Principal component analysis showed that six principal components (PCs) accounted for 72.65% of the total variation. The main factors contributing to PC1 were bulb weight, equatorial and bulb polar diameters, plant height, and degree of splitting into bulblets, whereas those contributing to PC2 were the bulb color of the epidermal cells of the fleshy scales and color of the dry skin on the bulb. The accessions were classified into three groups-clusters 1, 2, and 3. Cluster 2 accessions were the most suitable for selecting large and circular bulb-shaped onion cultivars. The phenotypic variation observed in this study may help to select potential accessions for breeding new onion cultivars.

Genetic and Phenotypic Evaluation of Milk and Fat Production Traits and Their Interrelationship in (Zebu×European) Crossbred Cattle Using Parent Group Mixed Model

  • Singh, D.;Yadav, A.S.;Dhaka, S.S.
    • Asian-Australasian Journal of Animal Sciences
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    • 제16권9호
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    • pp.1242-1246
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    • 2003
  • Data pertained to 335 crossbred cows comprising of 1/2 Friesian (F) + 1/2 Hariana (H), 1/2 F + 1/4 Jersey (J) + 1/4 H, 1/2 F + 1/4 Brown Swiss (BS) + 1/4 H, 1/2 F + 1/4 Red Dane (R) + 1/4 H, FR (I) and FRH (I) genetic groups extending over a period of 21 years (1970-1990) maintained at Animal Farm of CCS HAU, Hisar. The averages for first lactation milk yield was $2,486.24{\pm}80.26kg$ and peak yield of first three lactation were $11.35{\pm}0.72kg$, $13.97{\pm}0.60kg$ and $16.02{\pm}0.42kg$, respectively. The lifetime milk production was observed as $11,305.16{\pm}1,004.52kg$ in crossbred cattle. The average first lactation fat yield was observed as $102.06{\pm}0.01kg$ and peak fat yield of first three lactation were $0.458{\pm}0.01$, $0.490{\pm}0.01$ and $0.500{\pm}0.02kg$, respectively. The lifetime fat production was estimated as $502.31{\pm}45.90kg$. LTMP and LTFP had reasonably good additive genetic variance which could be exploited either through mass selection/combined with family or pedigree selection. FLMY, peak yields and LTMP had significant positive phenotypic correlation with FLFY and LTFP and the correlation at the genetic level were also higher and positive for these traits. Finally, peak week milk yield of first lactation (PMY1) was the earliest available trait having desirable and significant correlation at phenotypic and positive at genetic level with FLFY, PFY1 and PFY2, PFY3 and LTFP and selection for this trait will help in early evaluation of sires and dams and will increase genetic advancement per unit of time.

Estimates of Parameters for Genetic Relationship between Reproductive Performances and Body Condition Score of Hanwoo Cows

  • Choi, S.B.;Lee, J.W.;Choy, Y.H.;Na, K.J.;Kim, N.S.
    • Asian-Australasian Journal of Animal Sciences
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    • 제18권7호
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    • pp.909-914
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    • 2005
  • This study was conducted to estimate phenotypic and genetic parameters of body condition score (BCS) and reproductive traits in Hanwoo cows. DFREML procedures were applied to obtain variance-covariance components and heritability estimates with single or two-trait models. Estimates of phenotypic correlations of BCS at service with BCS at calving was 0.16 and 0.26 with calving interval, 0.08 with gestation length, and 0.06 with number of services per conception, respectively. Estimates of phenotypic correlation of BCS at calving was 0.10 with calving interval, 0.13 with gestation length, and 0.10 with number of services per conception, respectively. Estimates of phenotypic correlation were low and negative, -0.11 between calving interval and gestation length and -0.13 between gestation length and number of services per conception. Estimates of direct genetic correlation were -0.06, between BCS at service and BCS at calving, 0.37 between BCS at service and BCS at weaning, and -0.18 between BCS at calving and BCS at weaning. Estimates of direct genetic correlation of days from calving to the 1st service were 0.17 with number of services per conception and -0.21 with BCS at service. Estimates of direct genetic correlation for BCS at calving were -0.02 with number of services per conception and -0.08 with BCS at service. Estimates of direct genetic correlation for BCS at weaning were 0.02 with number of services per conception and -0.07 with BCS at service. Estimates of direct heritability from single trait analyses were 0.13 for BCS at service, 0.20 for BCS at calving, 0.02 for BCS at weaning, and 0.20 for number of service per conception, respectively. Estimates of direct heritability were 0.20 for birth weight and 0.10 for weaning weight.

Phenotypic and genetic parameters of productive traits in Rahmani and Romanov sheep and crossbreds

  • Khattab, Adel S.;Peters, Sunday O.;Adenaike, Adeyemi S.;Sallam, Abdel Aziz M.;Atya, Mahasan M.;Ahmed, Heba A
    • Journal of Animal Science and Technology
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    • 제63권6호
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    • pp.1211-1222
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    • 2021
  • Data of 651 lambs (68 Romanov, 49 Rahmani, 151 [♀1/2 Rahmani × ♂1/2 Romanov) and 383 (♀3/4 Rahmani and 1/4♂ Romanov]) were collected from Mehalet Mousa Farm, belonging to Animal Production Research Institute from the period of 2009 to 2016 to estimate phenotypic and genetic parameters. The traits studied were birth weight (BW), body weight at four week (BW4), body weight at eight weeks (BW8) and body weight at twelve weeks (BW12) or weaning weight. Least squares analysis of variance shows significance of the effects of breed groups, gender of lambs, birth type; month of birth and year of birth on all traits studied. Rahmani lambs had heavier BW, BW4, BW8 and BW12 while Romanov lambs had the lowest ones. The first generation (♀1/2 Rhamani × ♂1/2 Romanov) had heavier body weights than Romanov and the second generation (♀3/4 Rahmani × ♂1/4 Roamnov). Gender of lambs had highly significant effect on body weights. Males were significantly (p < 0.01) heavier than females for all traits studied. Least square means of BW, BW4, BW8 and BW12 for single lambs were 2.69, 10.43, 13.53 and 16.10 kg, respectively. Least square means of BW, BW4, BW8 and BW12 for twin lambs were 2.50, 9.37, 12.5 and 15.16 kg, respectively, while least square means of BW, BW4, BW8 and BW12 for triple lambs were 2.09, 7.86, 10.83 and 13.67 kg, respectively. Estimates of direct heritability measured by single trait animal model were 0.14, 0.23, 0.25 and 0.26 for BW, BW4, BW8 and BW12, respectively, and the corresponding measured by multi trait animal model were 0.17, 0.24, 0.32 and 0.36 for the same traits, respectively. All genetic and phenotypic correlations among different traits studied are positive and significant.

Genetic parameters for somatic cell score, milk yield and type traits in Nigerian Dwarf goats

  • Valencia-Posadas, Mauricio;Lechuga-Arana, Alma Arianna;Avila-Ramos, Fidel;Shepard, Lisa;Montaldo, Hugo H.
    • Animal Bioscience
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    • 제35권3호
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    • pp.377-384
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    • 2022
  • Objective: This study was conducted to estimate multi-trait genetic parameters for somatic cell score (SCS), milk yield and type traits in Nigerian Dwarf (ND) goats from the United States. Methods: Data from 1,041 ND goats in the United States with kiddings in 95 herds were used to estimate multi-trait genetic parameters for SCS, milk (MILK), fat (FAT), and protein (PROT) yields, and 14 type traits. An 18-trait mixed linear animal model for lactation mean SCS (Log2), MILK, FAT, PROT, and 14 type traits was applied. A factor analytic approach (FA1) in ASReml software was used to obtain convergence. Results: Averages for SCS were low (2.85±1.29 Log2), and were 314±110.6, 20.9±7.4, and 14±4.9 kg, respectively, for MILK, FAT, and PROT. Heritabilities for SCS, MILK, FAT, and PROT were 0.32, 0.16, 0.16, and 0.10, respectively. The highest heritabilities for type traits were for stature (0.72), teat diameter (0.49), and rump width (0.48), and the lowest estimates were for dairyness (0.003) and medial suspensory ligament (0.03). Genetic correlations of SCS with MILK, FAT, and PROT were positive but low (0.25, 0.18, and 0.23, respectively). Genetic and phenotypic correlations between MILK, FAT, and PROT were high and positive (≥0.66). Absolute values of genetic correlations involving SCS with type traits were generally low or no different from zero. Most of the phenotypic correlations involving SCS with type traits were low. No serious unfavorable genetic correlations between milk yield traits and SCS or between milk yield traits or SCS and type traits were found. Conclusion: Genetic variation exists in the ND breed for most studied traits. The development of selection programs based on these estimates may help accelerate favorable multi-trait genetic changes in this breed.

Breeding potential for pork belly to the novel economic trait

  • Seung-Hoon Lee;Jun-Mo Kim
    • Journal of Animal Science and Technology
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    • 제65권1호
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    • pp.1-15
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    • 2023
  • Pork is known as one of the preferred part of meat worldwide. Especially, the belly, known as 'Samgyeopsal' in South Korea, has been preferred by consumers in South Korea. Pork belly contained various component muscles, intermuscular and subcutaneous fat. The high-fat belly cut (containing 50%-60% fat ratio) has a low preference in South Korea whereas, the standard belly cut (20%-40% fat ratio) of the consumer preference was different. In addition, the evaluation system focused on lean meat production, represented by loin eye area and back fat thickness. In this review, we discussed the pork belly structure, phenotypic correlation with lean meat production ability and meat quality, and genetic potential to confirm to possibility of application to pig breeding. Moreover, the confirmed possibilities considered that could be a base on the evaluation of standard for the pork belly as an economic trait.