• 제목/요약/키워드: Particle clustering

검색결과 77건 처리시간 0.035초

DNA Chip 데이터의 군집화 성능 향상을 위한 Particle Swarm Optimization 알고리즘의 적용기법 (Applying Particle Swarm Optimization for Enhanced Clustering of DNA Chip Data)

  • 이민수
    • 정보처리학회논문지D
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    • 제17D권3호
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    • pp.175-184
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    • 2010
  • 최근 DNA 칩의 등장으로 유전자 관련 실험과 연구가 매우 용이해졌으며 이를 활용한 다양한 실험 결과로 대량의 데이터가 제공되고 있다. DNA칩에 의해 제공된 데이터는 2차원 행렬로 표현되며 하나의 축은 유전자를 나타내고 다른 하나의 축은 샘플정보를 나타낸다. 이러한 데이터에 대하여 빠른 시간 안에 좋은 품질의 군집화를 수행함으로써 이후의 분석 단계인 분류화 작업의 정확도와 효율성을 높일 수 있다. 본 논문에서는 생태계 모방 알고리즘의 하나인 Particle Swarm Optimization 알고리즘을 사용하여 방대한 양의 DNA칩 데이터에 대한 효율적인 군집화 기법을 제안하였으며 실험을 통해서 PSO 기반의 군집화 알고리즘이 기존의 군집화 알고리즘들보다 수행속도 및 품질 면에서 우수한 성능을 가짐을 보였다.

A Clustering Tool Using Particle Swarm Optimization for DNA Chip Data

  • Han, Xiaoyue;Lee, Min-Soo
    • Genomics & Informatics
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    • 제9권2호
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    • pp.89-91
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    • 2011
  • DNA chips are becoming increasingly popular as a convenient way to perform vast amounts of experiments related to genes on a single chip. And the importance of analyzing the data that is provided by such DNA chips is becoming significant. A very important analysis on DNA chip data would be clustering genes to identify gene groups which have similar properties such as cancer. Clustering data for DNA chips usually deal with a large search space and has a very fuzzy characteristic. The Particle Swarm Optimization algorithm which was recently proposed is a very good candidate to solve such problems. In this paper, we propose a clustering mechanism that is based on the Particle Swarm Optimization algorithm. Our experiments show that the PSO-based clustering algorithm developed is efficient in terms of execution time for clustering DNA chip data, and thus be used to extract valuable information such as cancer related genes from DNA chip data with high cluster accuracy and in a timely manner.

ANGULAR CLUSTERING OF FIR-SELECTED GALAXIES IN THE AKARI ALL-SKY SURVEY

  • Pollo, A.;Takeuchi, T.T.;Suzuki, T.L.;Oyabu, S.
    • 천문학논총
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    • 제27권4호
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    • pp.343-344
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    • 2012
  • We present the first measurement of the angular two-point correlation function for AKARI $90{\mu}m$ point sources, detected outside of the Milky Way plane and selected as candidates for extragalactic sources. This is the first measurement of the large-scale angular clustering of galaxies selected in the far-infrared after IRAS. We find a positive clustering signal in both hemispheres extending up to ~ 40 degrees, without any significant fluctuations at larger scales. The observed correlation function is well fitted by a power law function. However, southern galaxies seem to be more strongly clustered than northern ones and the difference is statistically significant. The reason for this difference - technical or physical - is still to be found.

개선된 PSO방법에 의한 학술연구조성사업 논문의 효과적인 분류 방법과 그 효과성에 관한 실증분석 (An Empirical Analysis Approach to Investigating Effectiveness of the PSO-based Clustering Method for Scholarly Papers Supported by the Research Grant Projects)

  • 이건창;서영욱;이대성
    • 지식경영연구
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    • 제10권4호
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    • pp.17-30
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    • 2009
  • This study is concerned with suggesting a new clustering algorithm to evaluate the value of papers which were supported by research grants by Korea Research Fund (KRF). The algorithm is based on an extended version of a conventional PSO (Particle Swarm Optimization) mechanism. In other words, the proposed algorithm is based on integration of k-means algorithm and simulated annealing mechanism, named KASA-PSO. To evaluate the robustness of KASA-PSO, its clustering results are evaluated by research grants experts working at KRF. Empirical results revealed that the proposed KASA-PSO clustering method shows improved results than conventional clustering method.

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Intelligent Clustering in Vehicular ad hoc Networks

  • Aadil, Farhan;Khan, Salabat;Bajwa, Khalid Bashir;Khan, Muhammad Fahad;Ali, Asad
    • KSII Transactions on Internet and Information Systems (TIIS)
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    • 제10권8호
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    • pp.3512-3528
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    • 2016
  • A network with high mobility nodes or vehicles is vehicular ad hoc Network (VANET). For improvement in communication efficiency of VANET, many techniques have been proposed; one of these techniques is vehicular node clustering. Cluster nodes (CNs) and Cluster Heads (CHs) are elected or selected in the process of clustering. The longer the lifetime of clusters and the lesser the number of CHs attributes to efficient networking in VANETs. In this paper, a novel Clustering algorithm is proposed based on Ant Colony Optimization (ACO) for VANET named ACONET. This algorithm forms optimized clusters to offer robust communication for VANETs. For optimized clustering, parameters of transmission range, direction, speed of the nodes and load balance factor (LBF) are considered. The ACONET is compared empirically with state of the art methods, including Multi-Objective Particle Swarm Optimization (MOPSO) and Comprehensive Learning Particle Swarm Optimization (CLPSO) based clustering techniques. An extensive set of experiments is performed by varying the grid size of the network, the transmission range of nodes, and total number of nodes in network to evaluate the effectiveness of the algorithms in comparison. The results indicate that the ACONET has significantly outperformed the competitors.

Mobile User Interface Pattern Clustering Using Improved Semi-Supervised Kernel Fuzzy Clustering Method

  • Jia, Wei;Hua, Qingyi;Zhang, Minjun;Chen, Rui;Ji, Xiang;Wang, Bo
    • Journal of Information Processing Systems
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    • 제15권4호
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    • pp.986-1016
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    • 2019
  • Mobile user interface pattern (MUIP) is a kind of structured representation of interaction design knowledge. Several studies have suggested that MUIPs are a proven solution for recurring mobile interface design problems. To facilitate MUIP selection, an effective clustering method is required to discover hidden knowledge of pattern data set. In this paper, we employ the semi-supervised kernel fuzzy c-means clustering (SSKFCM) method to cluster MUIP data. In order to improve the performance of clustering, clustering parameters are optimized by utilizing the global optimization capability of particle swarm optimization (PSO) algorithm. Since the PSO algorithm is easily trapped in local optima, a novel PSO algorithm is presented in this paper. It combines an improved intuitionistic fuzzy entropy measure and a new population search strategy to enhance the population search capability and accelerate the convergence speed. Experimental results show the effectiveness and superiority of the proposed clustering method.

Utilizing Particle Swarm Optimization into Multimodal Function Optimization

  • ;;고창섭
    • 대한전기학회:학술대회논문집
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    • 대한전기학회 2008년도 추계학술대회 논문집 전기기기 및 에너지변환시스템부문
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    • pp.86-89
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    • 2008
  • There are some modified methods such as K-means Clustering Particle Swarm Optimization and Niching Particle Swarm Optimization based on PSO which aim to locate all optima in multimodal functions. K-means Clustering Particle Optimization could locate all optima of functions with finite number of optima. Niching Particle Swarm Optimization is able to locate all of optima but high computing time. Because of those disadvantages, we proposed a new method that could locate all of optima with reasonal time. We applied our method and others as well to analytic functions. By comparing the outcomes, it is shown that our method is significantly more effective than the two others.

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입자 군집 최적화를 이용한 FCM 기반 퍼지 모델의 동정 방법론 (Identification Methodology of FCM-based Fuzzy Model Using Particle Swarm Optimization)

  • 오성권;김욱동;박호성;손명희
    • 전기학회논문지
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    • 제60권1호
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    • pp.184-192
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    • 2011
  • In this study, we introduce a identification methodology for FCM-based fuzzy model. The two underlying design mechanisms of such networks involve Fuzzy C-Means (FCM) clustering method and Particle Swarm Optimization(PSO). The proposed algorithm is based on FCM clustering method for efficient processing of data and the optimization of model was carried out using PSO. The premise part of fuzzy rules does not construct as any fixed membership functions such as triangular, gaussian, ellipsoidal because we build up the premise part of fuzzy rules using FCM. As a result, the proposed model can lead to the compact architecture of network. In this study, as the consequence part of fuzzy rules, we are able to use four types of polynomials such as simplified, linear, quadratic, modified quadratic. In addition, a Weighted Least Square Estimation to estimate the coefficients of polynomials, which are the consequent parts of fuzzy model, can decouple each fuzzy rule from the other fuzzy rules. Therefore, a local learning capability and an interpretability of the proposed fuzzy model are improved. Also, the parameters of the proposed fuzzy model such as a fuzzification coefficient of FCM clustering, the number of clusters of FCM clustering, and the polynomial type of the consequent part of fuzzy rules are adjusted using PSO. The proposed model is illustrated with the use of Automobile Miles per Gallon(MPG) and Boston housing called Machine Learning dataset. A comparative analysis reveals that the proposed FCM-based fuzzy model exhibits higher accuracy and superb predictive capability in comparison to some previous models available in the literature.

우리 나라 토양의 입도특성 (The Particle Size Distribution of Korean Soils)

  • 우철웅;장병욱
    • 한국농공학회:학술대회논문집
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    • 한국농공학회 2003년도 학술발표논문집
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    • pp.163-166
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    • 2003
  • In this study, a grouping of particle-size distributions(PSDs) by means of the fuzzy c-means clustering method(FCM) was presented. The classification was performed with the whole and the major soil series representing pedological origin. In case of the major soil series, PSDs were clustered as $2{\sim}4$ groups and the characteristics of clustering results were quite different between the soil series. It was found that the characteristics of PSDs at center of each class can be explained by formation process of each soil series. In case of whole soil data, PSDs were classified to 8 classes in which 4 classes were single mode and 4 classes were bimode distributions. Through this study, it is concluded that pedogenetic process is a plausible explanation for grain size distribution of soils.

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바이오칩 데이터의 군집화를 위한 Particle Swarm Optimization Clustering 알고리즘 (Particle Swarm Optimization Clustering Algorithm for cluster DNA Chip data)

  • 맹보연;최옥주;이윤경;이민수;윤경오;최혜연;김대현;이근일
    • 한국정보과학회:학술대회논문집
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    • 한국정보과학회 2008년도 한국컴퓨터종합학술대회논문집 Vol.35 No.1 (C)
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    • pp.60-63
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    • 2008
  • 바이오칩을 이용하여 유전자를 분석하는데 이때 바이오 칩 분석 시스템을 이용한다. 바이오 칩은 유전자와 실험의 두 축으로 이루어져 있으며 바이오 칩 분석 시스템을 사용하여 바이오 칩에서 자료를 추출하고 필요한 정보를 얻기 위해 데이터를 분석하는 시스템이다. 데이터를 분석하는 기법 중 클러스터링을 사용하는데 유사한 유전자들을 찾아 내어 정해놓은 클러스터로 정의한다. 같은 클러스터 안에 있는 유전자들은 서로 비슷한 성질을 가지고 있기 때문에 사용자들은 이 바이오 칩 으로부터 나온 정보를 효율적이게 사용할 수 있다. 더욱 효율적으로 사용하기 위해 본 논문에서는 방대한 양의 데이터의 최적화에 효율적인 생태계 모방 알고리즘 Particle Swarm Optimization을 이용하여 데이터들을 클러스터링을 하여 분류하는 시스템을 기술하고 있다.

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