• Title/Summary/Keyword: PAC 분석

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Draft genome sequence of Senegalimassilia sp. KGMB 04484 isolated from healthy Korean human feces (건강한 한국인 분변으로부터 분리된 Senegalimassilia sp. KGMB 04484 균주의 유전체 염기서열 초안)

  • Han, Kook-Il;Kang, Se Won;Kim, Ji-Sun;Lee, Keun Chul;Eom, Mi Kyung;Suh, Min Kuk;Kim, Han Sol;Park, Seung-Hwan;Lee, Ju Huck;Park, Jam-Eon;Oh, Byeong Seob;Yu, Seung Yeob;Choi, Seung-Hyeon;Lee, Dong Ho;Yoon, Hyuk;Kim, Byung-Yong;Lee, Je Hee;Lee, Jung-Sook
    • Korean Journal of Microbiology
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    • v.55 no.2
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    • pp.160-163
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    • 2019
  • Senegalimassilia sp. KGMB 04484 was isolated from fecal samples obtained from a healthy Korean. The whole-genome sequence of Senegalimassilia sp. KGMB 04484 was analyzed using the PacBio Sequel platform. The genome comprises a 2,748,041 bp chromosome with a G+C content of 61.18%, 2,300 total genes, 2,139 protein-coding gene, 21 rRNA genes, and 51 tRNA genes. Also, we found that strain KGMB 04484 had some genes for hydrolysis enzyme, fatty acid biosynthesis and metabolism in its genome based on the result of genome analysis. Those genes of KGMB 04484 may be related to regulation of human health and digest.

Draft genome sequence of Bacteroides sp. KGMB 02408 isolated from a healthy Korean feces (건강한 한국인 분변으로부터 분리된 Bacteroides sp. KGMB 02408 균주의 유전체 염기서열 초안)

  • Yu, Seung Yeob;Kim, Ji-Sun;Oh, Byeong Seob;Ryu, Seoung Woo;Park, Seung-Hwan;Kang, Se Won;Park, Jam-Eon;Choi, Seung-Hyeon;Han, Kook-Il;Lee, Keun Chul;Eom, Mi Kyung;Suh, Min Kuk;Kim, Han Sol;Lee, Dong Ho;Yoon, Hyuk;Kim, Byung-Yong;Lee, Je Hee;Lee, Jung-Sook;Lee, Ju Huck
    • Korean Journal of Microbiology
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    • v.55 no.3
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    • pp.296-299
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    • 2019
  • The genus of Bacteroides has been isolated from vertebrate animal feces. Bacteroides sp. KGMB 02408 was isolated from fecal samples obtained from a healthy Korean. The wholegenome sequence of Bacteroides sp. KGMB 02408 was analyzed using the PacBio Sequel platform. The genome comprises a 5,771,427 bp chromosome with a G + C content of 39.50%, 5,005 total genes, 18 rRNA genes, and 74 tRNA genes. Furthermore, we found that strain KGMB 02408 had some genes for oxidoreductases and menaquinone biosynthesis in its genome based on the result of genome analysis.

Complete genome sequence of Bacillus thuringiensis C25, a potential biocontrol agent for sclerotia-forming fungal phytopathogens (생물학적방제 효과가 뛰어난 Bacillus thuringiensis C25 균주의 유전체 분석)

  • Lee, Hwa-Yong;Won, Kyungho;Kim, Yoon-Kyeong;Cho, Min;Kim, Kangmin;Ryu, Hojin
    • Korean Journal of Microbiology
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    • v.53 no.3
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    • pp.216-218
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    • 2017
  • We here provide the complete genome sequence of Bacillus thuringiensis C25, the strain showing antagonistic effects on fungal phytopathogens. The genome comprised of 5,308,062 bp with 35.32% G+C content of a circular chromosome and a plasmid containing 308,946 bp with 32.23% G+C content. The chromosome and plasmid genome included 5,683 protein coding DNA sequences, 107 tRNA and 42 rRNA genes.

Construction of the Concept-Based Faceted Framework for Thesaurus Integration (시소러스 통합을 위한 개념기반 패싯 프레임워크 구축)

  • Lee, Seung-Min
    • Journal of Korean Library and Information Science Society
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    • v.41 no.3
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    • pp.269-290
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    • 2010
  • Applying one specific thesaurus might cause several problems because each thesaurus has its own characteristics inherited from its construction process. Therefore, integration of thesauri can be an appropriate approach to overcome the difficulties. This current research selected physics as a domain and two thesauri in the domain: PACS and PIRA. By integrating these two heterogeneous thesauri, this research could construct a conceptual structure that covers the whole concepts related to physics. By constructing the conceptual structure with the use of facet analysis from integrated thesaurus, it provides knowledge base with hierarchical structure and clear relationships between concepts. It can be an alternate approach to effective and efficient information retrieval and knowledge discovery.

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Various Image Compression using Medical Image and Analysis for Compression Ratio (의료영상을 이용한 다양한 압축방법의 구현 및 압축율 비교.분석)

  • 추은형;김현규;박무훈
    • Proceedings of the Korean Institute of Information and Commucation Sciences Conference
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    • 2002.05a
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    • pp.185-188
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    • 2002
  • With improved network system and development of computer technology, a lot of hospitals are equipping PACS that deals with process and transmission of the medical images. Owing to equipment of PACS the problems on transmission and storage of the medical images were treated. The way to solve the problems is to use various image processing techniques and compression methods This paper describes RLC in lossless image compression method, JPEG using DCT in loss image compression applied to medical images as way implementing DICOM standard. Now the medical images were compressed with Wavelet transform method have been taken advantage of image process. And compression rate of each compression methods was analyzed.

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Draft genome sequence of lytic bacteriophage CF1 infecting Citrobacter freundii isolates (Citrobacter freundii 분리주를 감염시키는 용균 박테리오파지 CF1의 유전체 염기서열 초안)

  • Kim, Youngju;Ko, Seyoung;Yeon, Young Eun;Lim, Jaewon;Han, Beom Ku;Kim, Hyunil;Ahn, Jeong Keun;Kim, Donghyuk
    • Korean Journal of Microbiology
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    • v.54 no.1
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    • pp.79-80
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    • 2018
  • Citrobacter freundii is a facultative anaerobic and a Gram-negative bacterium of Enterobacteriaceae family, and is an opportunistic pathogen. Bacteriophages infecting C. freundii can be an effective treatment for C. freundii infections. Here, the complete genomic sequence is announced for a lytic bacteriophage CF1 infecting C. freundii isolates.

Complete genome sequence of Pantoea intestinalis SRCM103226, a microbial C40 carotenoid zeaxanthin producer (식용곤충 갈색거저리에서 분리한 카로테노이드 생성균주인 Pantoea intestinalis SRCM103226 균주의 유전체 해독)

  • Kim, Jin Won;Ha, Gwangsu;Jeong, Seong-Yeop;Jeong, Do-Youn
    • Korean Journal of Microbiology
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    • v.55 no.2
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    • pp.167-170
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    • 2019
  • Pantoea intestinalis SRCM103226, isolated from edible insect mealworm overproduces zeaxanthin as a main carotenoid. The complete genome of P. intestinalis SRCM103226 was sequenced using the Pacific Biosciences (PacBio) RS II platform. The genome of P. intestinalis SRCM103226 comprises a 4,784,919 bp circular chromosome (53.41% G+C content), and is devoid of any extrachromosomal plasmids. Annotation using the RAST server reveals 4,332 coding sequences and 107 RNAs (22 rRNA genes, 85 tRNA genes). Genome annotation analysis revealed that it has five genes involved in the carotenoid pathway. The genome information provides fundamental knowledge for comparative genomics studies of the zeaxanthin pathway.

Morphological Sex Differentiation of the Abalone Haliotis discus hannai (북방전복 Haliotis discus hannai의 형태학적 성분화)

  • Kim, Hyejin;Jeon, Mi Ae;Choi, Ji Sung;Kim, Byeong Hak;Son, Maeng Hyun;Lee, Jung Sick
    • The Korean Journal of Malacology
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    • v.31 no.4
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    • pp.273-277
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    • 2015
  • This study was conducted to provide the reproductive biological information and basic data on the artificial sex control of Haliotis discus hannai. The morphological sex differentiation process of H. discus hannai could be classified into following five phases: 1) formation of gonad outer membrane (FGOM) (${\leq}SL\;10.0{\pm}1.0mm$), 2) primordial germ cells (PGCs) appearance in the connective tissue between intestine and hepatopancreas (PAC), and formation of gonadal cavity (FGC) (SL $15.0{\pm}2.0mm$), 3) PGCs appearance in the epithelial layer of gonadal cavity (PAG) (SL $18.0{\pm}2.0mm$), 4) formation of gametogenic follicle and appearance of early oocytes and spermatogonia (FGOC) (SL $21.0{\pm}2.0mm$), 5) morphological sex differentiation (MSD) (${\geq}SL\;23.0{\pm}2.0mm$). From histological analysis sex differentiation rate in SL 24.1-25.0 mm of H. discus hannai was 90.0% and sex ratio (female : male) was 1:0.8.

Fouling Mitigation for Pressurized Membrane of Side-Stream MBR Process at Abnormal Operation Condition (가압식 분리막을 이용한 Side-Stream MBR 공정의 비정상 운전조건에서 막 오염 저감)

  • Ko, Byeong-Gon;Na, Ji-Hun;Nam, Duck-Hyun;Kang, Ki-Hoon;Lee, Chae-Young
    • Journal of Korean Society of Environmental Engineers
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    • v.38 no.6
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    • pp.323-328
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    • 2016
  • Pressurized membrane used for side-stream MBR process requires fouling control strategy both for normal and abnormal operation conditions for stable operation of the facilities. In this study, $85m^3/day$ of pilot-scale side-stream MBR process was constructed for the evaluation of fouling mitigation by air bubble injection into the membrane module. In addition, fouling phenomena at abnormal operation conditions of low influent and/or loading rate were also investigated. Injection of air bubble was found to be effective in delaying transmembrane pressure (TMP) increase mainly due to scouring effect on the membrane surface, resulting in expanded filtration cycle at a high flux of $40L/m^2{\cdot}h$ (LMH). At abnormal operation condition, injection of PACl (53 mg/L as Al) into the bioreactor showed 19% reduction of TMP increase. However, inhibition of nitrifying bacteria by continuous PACl injection was observed from batch experiments. In contrast, injection of powdered activated carbon (PAC, 0.6 g/L) was able to maintain the initial TMP of $0.2kg/cm^2$ for 5 days at the abnormal conditions. It may have been caused from the adsorption of extracellular polymeric substances (EPS), which was known to be excessively released during growth inhibition condition and act as the major foulants in MBR operations.

Comparison of Time Analysis on the Film Based System Versus PACS in the CT Scanning (CT 검사에서 시간분석에 의한 필름시스템과 PACS의 비교 연구)

  • Kweon, Dae-Cheol;Hong, Sung-Man;Park, Peom
    • IE interfaces
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    • v.15 no.4
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    • pp.439-443
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    • 2002
  • In this paper, we study to evaluate the relative time required to perform the CT scanning in the PACS versus a film-based system and helical versus non-helical studies. Time studies were performed in 175 consecutive CT scanning. Images from 85 examinations were electronically transferred to a PACS, and 90 were printed to film. The time required to obtain and electronically transfer the images or print the images to film and make the current and previous studies available to the radiologists for interpretation was recorded. The time required for a radiological technologist to complete a CT test was reduced by 43% with the PACS compared with the film-based system and nonhelical was reduced 10~20% with helical studies. This reduction was due to the elimination of a transfer and printing, such as the printing at window or level settings. The use of PACS can result in the elimination of time tasks for the radiological technologist, resulting in marked reduction in examination time. This reduction can result in decreased cost and increased productivity in PACS operation.