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Discrimination of the commercial Korean native chicken population using microsatellite markers

  • Choi, Nu Ri;Seo, Dong Won;Jemaa, Slim Ben;Sultana, Hasina;Heo, Kang Nyeong;Jo, Cheorun;Lee, Jun Heon
    • Journal of Animal Science and Technology
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    • v.57 no.2
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    • pp.5.1-5.8
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    • 2015
  • Background: Korean native chicken (KNC) is a well-known breed due to its superior meat taste. This breed, however, owing to a low growth rate, has a high market price. In order to overcome this disadvantage, the National Institute of Animal Science (NIAS) in Korea developed a commercial KNC breed, named Woorimatdag version 2 (WM2), an upgraded version of the Woorimatdag (WM1) breed and the WM2 was created by crossing the KNC with meat type breeds. This study aims to discriminate between WM2 and other chicken breeds using microsatellite (MS) markers. Methods: A total of 302 individuals from eight Korean chicken populations were examined. The genetic diversity and population structure analysis were investigated using Cervus, API-CALC, STRUCTURE, PowerMarker programs. Results: Based on heterozygosity and polymorphic information content (PIC) values, 30 MS markers were initially selected from 150 markers. The identified average number of alleles (Na), expected heterozygosity, and PIC values for the WM2 samples were 7.17, 0.741, and 0.682, respectively. Additionally, the paternity of individuals was assigned with a success rate of greater than 99% using 12 markers, the best minimum number of markers. The 12 selected markers contained heterozygosity and PIC values above 0.7 and probability of identity values around zero. Using these markers, the determined probability of identity (PI), $PI_{half-sibs}$, and $PI_{sibs}$ values were 3.23E-33, 5.03E-22, and 8.61E-08, respectively. Conclusions: WM2 is well differentiated with respect to other chicken breeds based on estimated genetic distances. The results presented here will contribute to the identification of commercial WM2 chicken in the market.

Comparison of Collimator Choice on Image Quality of I-131 in SPECT/CT (I-131 SPECT/CT 검사의 에서 조준기 종류에 따른 영상 비교 평가)

  • Kim, Jung Yul;Kim, Joo Yeon;Nam-Koong, Hyuk;Kang, Chun Goo;Kim, Jae Sam
    • The Korean Journal of Nuclear Medicine Technology
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    • v.18 no.1
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    • pp.33-42
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    • 2014
  • Purpose: I-131 scan using High Energy (HE) collimator is generally used. While, Medium Energy (ME) collimator is not suggested to use in result of an excessive septal penetration effects, it is used to improve the sensitivities of count rate on lower dose of I-131. This research aims to evaluate I-131 SPECT/CT image quality using by HE and ME collimator and also find out the possibility of ME collimator clinical application. Materials and Methods: ME and HE collimator are substituted as Siemens symbia T16 SPECT/CT, using I-131 point source and NEMA NU-2 IQ phantom. Single Energy Window (SEW) and Triple Energy Windows (TEW) are applied for image acquisition and images with CTAC and Scatter correction application or not, applied different number of iteration and sub set are reconstructed by IR method, flash 3D. By analysis of acquired image, the comparison on sensitivities, contrast, noise and aspect ratio of two collimators are able to be evaluated. Results: ME Collimator is ahead of HE collimator in terms of sensitivity (ME collimator: 188.18 cps/MBq, HE collimator: 46.31 cps/MBq). For contrast, reconstruction image used by HE collimator with TEW, 16 subset 8 iteration applied CTAC is shown the highest contrast (TCQI=190.64). In same condition, ME collimator has lower contrast than HE collimator (TCQI=66.05). The lowest aspect ratio for ME collimator and HE collimator are 1.065 with SEW, CTAC (+) and 1.024 with TEW, CTAC (+) respectively. Conclusion: Selecting a proper collimator is important factor for image quality. This research finding tells that HE collimator, which is generally used for I-131 scan emitted high energy ${\gamma}$-ray is the most recommendable collimator for image quality. However, ME collimator is also applicable in condition of lower dose, lower sensitive if utilizing energy window, matrix size, IR parameter, CTAC and scatter correction appropriately.

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Clinical Review of Toxic Alcohol Poisoning Cases in Korea (독성 알코올 중독 환자에 대한 고찰)

  • Rhee, Nu-Ga;Chung, Sung-Phil;Park, In-Cheol;Lee, Kyeong-Ryong;Kim, Hyun-Jin;Kim, Gun-Bea;Cho, Young-Soon;Kwon, In-Ho;Kim, Seung-Whan
    • Journal of The Korean Society of Clinical Toxicology
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    • v.10 no.1
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    • pp.15-21
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    • 2012
  • Purpose: Toxic alcohols are responsible for accidental and suicide motivated poisonings, resulting in death or permanent sequelae for the afflicted patients. Major therapeutic modalities in these cases include treatment with alcohol dehydrogenase inhibitors and extracorporeal elimination. There have been a number of case reports of toxic alcohol intoxication in Korea. The purpose of this study was to review the clinical characteristics of patients suffering toxic alcohol intoxication. Methods: We retrospectively reviewed the medical records of patients who presented with toxic alcohol intoxication at 8 emergency departments (ED) from Jun 2005 to Nov 2011. Patients who ingested methanol, isopropyl alcohol, ethylene glycol, and other alcohols except ethanol, were included in this study. The clinical characteristics of these patients were analyzed to include anion and osmolar gap, and estimated concentration of alcohol in the body. Results: During the study period, 21 patients were identified who had ingested toxic alcohol (methanol; 12 patients, ethylene glycol; 9 patients). At ED arrival, the mean anion gap was $18.7{\pm}6.9$ and the osmolar gap was elevated in 13 patients. Oral and IV ethanol were administrated to 11 patients in order to inhibit alcohol dehydrogenase. Extracorporeal elimination procedures such as hemodialysis were performed in 9 patients. There were no fatalities, but the one patient suffered permanent blindness. Conclusion: This study found that ethylene glycol and methanol were the substances ingested which produced toxic alcohol intoxication. The patients presented with high anion gap metabolic acidosis and were typically treated with oral ethanol and hemodialysis.

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Phylogenetic Analysis using mtDNA D-loop Sequences in Korean Native Ducks (mtDNA D-loop 염기서열 변이를 이용한 토종오리의 계통 분류)

  • Choi, Nu Ri;Seo, Dong Won;Jin, Seon Deok;Sultana, Hasina;Heo, Kang Nyeong;Lee, Jun Heon
    • Korean Journal of Poultry Science
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    • v.41 no.4
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    • pp.235-240
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    • 2014
  • Recently, the consumption of duck meat has been gradually increased in Korea. However, most of the duck breeds in Korea were imported from overseas. Based on the large demands for the breeding stocks of native ducks, a new project for the commercial use of the Korean native ducks has been launched. For the initial investigation of the relationships between Korean native duck (KND) with other duck breeds, the sequences from D-loop control region in mitochondrial DNA (mtDNA) was used. The results from phylogenetic analysis indicated that both KND and White Commercial Duck (WCD) breeds were classified well with wild duck breeds. However, mallard duck was not discriminated well with KND. The haplotype analysis indicated that KND and WCD have eight different haplotypes with eleven SNPs. Three haplotypes (haplotype 1, 3, 4) were shared both in KND and WCD. On the other hand, haplotype 1 was appeared only KND and haplotype 5, 6, 7, 8 were identified only in WCD population. With further verifications, the results presented here can be used for the conservation and commercialization of the Korean native ducks.

An Experimental Study on the Augmentation of Heat Transfer by Impinging Air Jets with Swirl (충돌선회분류(衝突旋回噴流) 열전달증진(熱傳達增進)에 관(關)한 실험적(實驗的) 연구(硏究))

  • Ohu, Su-Cheol;Park, Sung-Soo
    • Solar Energy
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    • v.13 no.1
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    • pp.22-30
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    • 1993
  • This Paper deals with the experimental study of the axisymmetric air jet impinging vertically on the flat heating surface with and without swirl. The purpose of this study is to investigate the characteristics of flow, augmentation of heat transfer rate, turbulent intensity, and the comparison of heat transfer rate, the optimal swirling condition about the swirl and nonswirl axisymmetric air jet. In order to augment the heat transfer on the flat heating surface without introducing any additional power, the technique used in the present work was placement of twisted tape inserted pipe in front of the nozzle exit in order to make a swirl. The effect of swirl degree is investigated in case of S=0., 0.056, 0.111, 0.222 and the velocity of the jet was 14, 20, 26, 32, 38, 44m/s. The distance between the nozle exit and the stagnation point on the impinging plate was the H/D=$1{\sim}14$. In order to analyze of the flow structure which increase heat transfer, the velocity and the turbulent intensity of the axisymmetric jet was measured by a hot wire anemometer according to the swirl number and H/D.

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Primary Solution Evaluations for Interpreting Electromagnetic Data (전자탐사 자료 해석을 위한 1차장 계산)

  • Kim, Hee-Joon;Choi, Ji-Hyang;Han, Nu-Ree;Song, Yoon-Ho;Lee, Ki-Ha
    • Geophysics and Geophysical Exploration
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    • v.12 no.4
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    • pp.361-366
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    • 2009
  • Layered-earth Green's functions in electormagnetic (EM) surveys play a key role in modeling the response of exploration targets. They are computed through the Hankel transforms of analytic kernels. Computational precision depends upon the choice of algebraically equivalent forms by which these kemels are expressed. Since three-dimensional (3D) modeling can require a huge number of Green's function evaluations, total computational time can be influenced by computational time for the Hankel transform evaluations. Linear digital filters have proven to be a fast and accurate method of computing these Hankel transforms. In EM modeling for 3D inversion, electric fields are generally evaluated by the secondary field formulation to avoid the singularity problem. In this study, three components of electric fields for five different sources on the surface of homogeneous half-space were derived as primary field solutions. Moreover, reflection coefficients in TE and TM modes were produced to calculate EM responses accurately for a two-layered model having a sea layer. Accurate primary fields should substantially improve accuracy and decrease computation times for Green's function-based problems like MT problems and marine EM surveys.

Behavior and Circadian Rhythm of Emergence, Copulation and Oviposition in the Oriental Tobacco Budworm, Heliothis assulta Guenee (담배나방의 우화, 교미 및 산란의 행동과 일일리듬)

  • 조점래;부경생
    • Korean journal of applied entomology
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    • v.27 no.2
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    • pp.103-110
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    • 1988
  • The behavior and circadian rhythm of emergence, copulation and oviposition in the Oriental tobacco budworm (Heliothis assulta Guenee) were studied to obtain the following results. More than three quarters of adults emerged within 3 hours after the light-off. It took about 33 min for an adult to expand and tan its wings after emergence. Adult male showed a sequential pattern of mating behavior, such as antennal movement, wing elevation and vibration, exten¬sion of hairpencils, and tapping of female ovipositor leading to a copulation. However, adult female revealed a rather simple behavior, such as protraction and retraction of her terminal abdomen and vibration of wings. All of the mating took place during the early part of the scotophase, with the peak from 1 hr to 2 hrs after the light-off. But the mating peak in virgin females tended to advance with age. Adult females showed the highest rate of mating among 24 hr-olds and the rate declined with age. The rate of first matings in males gave a very similar pattern to that of females. The duration of copulation was $77\pm$14min. Oviposition occurred throughout the entire scotophase, with the peak during the first 2 hrs. The most nu¬mber of eggs deposited daily was seen on the 3rd day after the mating. Mating rate, number of eggs laid and longevity we~e compared under different sex ratio. Unmated adults lived longer than mated adults.

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Experimental Formulae Development of Hydraulic Stability for Riprap (사석의 수리적 안정성 실험식 개발)

  • Choi, Heung-Sik;Park, Gwang-Ho
    • Journal of Korea Water Resources Association
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    • v.44 no.6
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    • pp.449-459
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    • 2011
  • By examining the experimental results, the critical mean velocity which initiates the movement of riprap is increased with the riprap size in mean diameter, the mean diameter over water depth (d/h), Froude number (Fr), and turbulent shear velocity over critical mean velocity (u*/${\nu}$) which have great correlations among them so these parameters are adopted governing hydraulic stability for riprap. The hydraulic stability equation for riprap is developed by regression analysis. The developed equation is expanded from 0.36~0.73 m/s of experimental range to 0~5.0 m/s for the application in engineering discipline. So many useful relations among those parameters including critical mean velocity are derived by expanding to high Reynolds regions. Mean diameter calculation results by expanding to high Reynolds regions coincide with the calculations of ASCE and USBR at the range of 0~3.0 m/s and the calculation result of ASCE at the range of 3.0~5.0 m/s. The results by developed formulae coincide well with the formulae of ASCE in general and also the results by recently developed existing formulae of hydraulic stability for riprap. Thus, the developed equation has the high applicability in engineering discipline to evaluate the hydraulic stability for riprap.

High frequency somatic embryogenesis and plant regeneration of interspecific ginseng hybrid between Panax ginseng and Panax quinquefolius

  • Kim, Jong Youn;Adhikari, Prakash Babu;Ahn, Chang Ho;Kim, Dong Hwi;Kim, Young Chang;Han, Jung Yeon;Kondeti, Subramanyam;Choi, Yong Eui
    • Journal of Ginseng Research
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    • v.43 no.1
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    • pp.38-48
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    • 2019
  • Background: Interspecific ginseng hybrid, Panax ginseng ${\times}$ Panax quenquifolius (Pgq) has vigorous growth and produces larger roots than its parents. However, F1 progenies are complete male sterile. Plant tissue culture technology can circumvent the issue and propagate the hybrid. Methods: Murashige and Skoog (MS) medium with different concentrations (0, 2, 4, and 6 mg/L) of 2,4-dichlorophenoxyacetic acid (2,4-D) was used for callus induction and somatic embryogenesis (SE). The embryos, after culturing on $GA_3$ supplemented medium, were transferred to hormone free 1/2 Schenk and Hildebrandt (SH) medium. The developed taproots with dormant buds were treated with $GA_3$ to break the bud dormancy, and transferred to soil. Hybrid Pgq plants were verified by random amplified polymorphic DNA (RAPD) and inter simple sequence repeat (ISSR) analyses and by LC-IT-TOF-MS. Results: We conducted a comparative study of somatic embryogenesis (SE) in Pgq and its parents, and attempted to establish the soil transfer of in vitro propagated Pgq tap roots. The Pgq explants showed higher rate of embryogenesis (~56% at 2 mg/L 2,4-D concentration) as well as higher number of embryos per explants (~7 at the same 2,4-D concentration) compared to its either parents. The germinated embryos, after culturing on $GA_3$ supplemented medium, were transferred to hormone free 1/2 SH medium to support the continued growth and kept until nutrient depletion induced senescence (NuDIS) of leaf defoliation occurred (4 months). By that time, thickened tap roots with well-developed lateral roots and dormant buds were obtained. All Pgq tap roots pretreated with 20 mg/L $GA_3$ for at least a week produced new shoots after soil transfer. We selected the discriminatory RAPD and ISSR markers to find the interspecific ginseng hybrid among its parents. The $F_1$ hybrid (Pgq) contained species specific 2 ginsenosides (ginsenoside Rf in P. ginseng and pseudoginsenosides $F_{11}$ in P. quinquefolius), and higher amount of other ginsenosides than its parents. Conclusion: Micropropagation of interspecific hybrid ginseng can give an opportunity for continuous production of plants.

Herbal Medicine for Premenstrual Syndrome: A Systematic Review and Meta-analysis (월경전증후군에 대한 한약 치료의 효과 : 체계적 문헌 고찰과 메타 분석)

  • Ji-In Seo;Yun-Jae Lee;Seo-Lim Ko;Nu-Ree Kim;Jeong-Hun Kim;Mi-Ju Son;Young-Eun Kim;An-Na Kim;Eun-Hee Lee
    • The Journal of Korean Obstetrics and Gynecology
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    • v.36 no.4
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    • pp.96-120
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    • 2023
  • Objectives: This study reports the findings that support the efficacy of herbal medicine (HM) for premenstrual syndrome (PMS). Methods: We conducted meta-analysis of findings from randomized controlled trials (RCTs) for PMS treated with HM. The articles were published before July 2022, located using 9 databases (Pubmed, EMBASE, Cochrane Library, CINAHL, CNKI, CiNii, SCIENCE ON, KoreaMed, OASIS). Results: We observed 2,034 studies, of which 23 RCTs met our inclusion criteria. The risk of bias in the included studies was relatively unclear or high. Meta-analysis of 3 RCTs showed that HM group had a significantly higher total effective rate than the western medicine group (RR 1.20 [95% CI 1.06, 1.36, p=0.004]). Meta-analysis of 1 RCT showed that HM group had a significantly lower symptom score (MD -3.04 [95% CI -5.36, -0.72, p=0.01]), while there was no significant difference in daily record of severity of problems scale (MD -20.52 [95% CI -49.33, 8.29, p=0.16]). Conclusions: HM significantly improved PMS symptoms than general treatment and no serious adverse events were reported. However, the evidence on the effectiveness and safety of HM for PMS was not enough to provide reliable results due to the small number and low quality of included studies. We believe that rigorous RCTs will lead to more reliable evidence of the intervention.