• Title/Summary/Keyword: Nocardia

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Biodegradation of crude oil in soil slurry phase by Nocardia sp.

  • Ko, Bum-Jun;Yang, Ji-Won
    • Proceedings of the Korean Society of Soil and Groundwater Environment Conference
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    • 1996.11a
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    • pp.114-117
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    • 1996
  • Biodegradation potential of crude oil has been studied in liquid and soil slurry culture. Studies were performed to optimize the factors affecting metabolic activity. Arabian Light(sulfur content 1%) was used as a representative crude oil and Nocardia sp. was selected as an oil degrading microorganism based on its ability to degrade and emulsify Effects of various nutritional and environmental conditions as well as emulsification and surface tension were observed. Tentative optimization of environmental and nutritional condition were as follow; pH 8, sodium nitrate as inorganic nitrogen source, yeast extract 0.05%, phosphate concentration 0.25% and glucose addition of 1.0% (w/v basis), extent of degradation to 78 %.

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Monitoring Bacterial Population Dynamics Using Real-Time PCR During the Bioremediation of Crude-Oil-Contaminated Soil

  • Baek, Kyung-Hwa;Yoon, Byung-Dae;Cho, Dae-Hyun;Kim, Byung-Hyuk;Oh, Hee-Mock;Kim, Hee-Sik
    • Journal of Microbiology and Biotechnology
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    • v.19 no.4
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    • pp.339-345
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    • 2009
  • We evaluated the activity and abundance of the crude-oil-degrading bacterium Nocardia sp. H17-1 during bioremediation of oil-contaminated soil, using real-time PCR. The total petroleum hydrocarbon(TPH) degradation rate constants(k) of the soils treated with and without H17-1 were $0.103\;d^{-1}$ and $0.028\;d^{-1}$ respectively. The degradation rate constant was 3.6 times higher in the soil with H17-1 than in the soil without H17-1. In order to detect and quantify the Nocardia sp. H17-1 in soil samples, we quantified the genes encoding 16S ribosomal RNA(16S rRNA), alkane monooxygenase(alkB4), and catechol 2,3-dioxygenase(23CAT) with real-time PCR using SYBR green. The amounts of H17-1 16S rRNA and alkB4 detected increased rapidly up to 1,000-folds for the first 10 days, and then continued to increase only slightly or leveled off. However, the abundance of the 23CAT gene detected in H17-1-treated soil, where H17-1 had neither the 23CAT gene for the degradation of aromatic hydrocarbons nor the catechol 2,3-dioxygenase activity, did not differ significantly from that of the untreated soil($\alpha$=0.05,p>0.22). These results indicated that H17-1 is a potential candidate for the bioaugmentation of alkane-contaminated soil. Overall, we evaluated the abundance and metabolic activity of the bioremediation strain H17-1 using real-time PCR, independent of cultivation.

Effects of Soil Types on the Biodegradation of Crude Oil by Nocardia sp. H17-1

  • Yoon, Byung-Dae;Baek, Kyung-Hwa;Kim, Hee-Sik;Moon, Seong-Hoon;Lee, In-Sook;Oh, Hee-Mock
    • Journal of Microbiology and Biotechnology
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    • v.14 no.5
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    • pp.901-905
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    • 2004
  • The degradation and mineralization of crude oil were investigated over 50-days in three soils, loamy sand, sand, and combusted loamy, which were artificially contaminated with crude oil (50 g $kg^{-1}$) and inoculated with Nocardia sp. H17-1. The degradation efficiency of total petroleum hydrocarbon (TPH) in sand was the highest at 76% among the three soils. The TPH degradation rate constants $(k_{TPH})$ in loamy sand, sand, and combusted loamy sand were 0.027 $d^{-1}$, 0.063 $d^{-1}$, and 0.016 $d^{-1}$, respectively. In contrast, the total amount of $CO_2$ evolved was the highest at 146.1 mmol in loamy sand. The $CO_2$ evolution rate constants (k_{CO2})$ in loamy sand, sand, and combusted loamy sand were 0.057 $d^{-1}$, 0.066 $d^{-1}$, and 0.037 $d^{-1}$, respectively. Therefore, it seems that the degradation of crude oil in soils can be proportional to the soil pore space and that mineralization can be accelerated with the increase of organic substance.

Studies on the Biological Properties of Nocardia Brasiliensis Isolated from Pus (Nocardia brasiliensis의 분리(分離) 및 생물학적(生物學的) 성상(性狀)에 관(關)하여)

  • Suk, Jong-Sung;Lee, Jae-Chul;Lee, Sung-Hoon
    • The Journal of the Korean Society for Microbiology
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    • v.10 no.1
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    • pp.25-32
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    • 1975
  • The majority of Nocardial infections reported in North America areIN. ;asteroides while those in Latin America are N. brasiliensis species. Infection with N. brasiliensis, to our knowledge, has not previously been reported in Korea. The auther isolated one strain of Nocardia brasiliensis from the abscess of right bottock of 23 month old female leukemic patient who was treated with methotrixate for five months at the Seoul National University Hospital. The morphological characteristics and biological properties were similar with the R.E. Gordon's description. The results are summarized as follow: 1. After 5 days incubation on Sabouroud's glucose agar, the acid fast character appeared partially. 2. Tyrosine, casein and urea were decomposed by 7 days incubation both at room temperature and at $37^{\circ}C$. 3. Sod, citrate and sod. acetate were utilized at $22^{\circ}C\;and\;37^{\circ}C$ after 28 days incubation while the sod. benzoate utilization was negative. 4. The survival range of temperature was from $10^{\circ}C\;to\;40^{\circ}C$. 5. Dulcitol, galactose, glycerol, lactose, maltose, mannitol, raffinose, rhamnose, sorbitol, trehalose and xylose fermentations were not observed up to 28 days, while the fermentation of glucose and inositol were positive.

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A Case of Nocardiosis (Nocardiosis 1예)

  • Kim, Jeong-Hee;Yoon, Ki-Heon;Yoo, Jee-Hong;Kang, Hong-Mo;Suh, Jin-Tae
    • Tuberculosis and Respiratory Diseases
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    • v.39 no.4
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    • pp.355-360
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    • 1992
  • Nocardiosis is an acute, subacute or chronic infection, which usually introduced through the respiratory tract resulting pneumonia, and may develop a disseminated infection, especially subcutaneous abscess and/or CNS infection. It is usually affects the immunocompromized host and may be fatal unless early diagnosis and adequate treatment are performed. There have been only several case reports of nocardial infection in Korea. Nocardiosis is so unfamiliar to many physicians that may be misdiagnosed as pneumonia, tuberculosis, or neoplasm. We have experienced a case of nocardiosis from a patient who had been treated as pneumonia and tuberculosis at first. The 57-year-old male patient had fever, chill, dyspnea and blood tinged purulent sputum for 20 days. Under the impression of bacterial pneumonia, broad spectrum antibiotics were administered for more than 3 weeks without clinical improvement. Although antituberculous drugs began to be administered after acid fast bacilli were found in bronchial aspirate by bronchoscopy, the nocardial infection was suspected due to no clinical response toward antituberculous therapy and the occurrence of multiple subcutaneous abscesses on scalp. The diagnosis was made by modified Ziehl-Neelson stain and culture of the sputum and pus. Nocardia asteroides was identified. After 25 days of trimethoprim-sulfamethoxazole treatment, the patient was much improved and discharged.

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Characterization of TCE-Degrading Bacteria and Their Application to Wastewater Treatment

  • Lee, Wan-Seok;Park, Chan-Sun;Kim, Jang-Eok;Yoon, Byung-Dae;Oh, Hee-Mock
    • Journal of Microbiology and Biotechnology
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    • v.12 no.4
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    • pp.569-575
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    • 2002
  • Two bacterial strains capable of degrading trichloroethylene (TCE), isolated form soils contaminated with various chlorinated alkenes, were identified as Alcaligenes odorous N6 and Nocardia sp. Hl7. In addition, four KCTC strains, including three strains of Pseudomonas putida and one strain of Sphingomonas chlorophenolica, exhibited an ability to degrade toluene. A. odorans N6 and Nocardia sp. H17 degraded 84% of the initial amount of TCE in a basal salts medium (BSM), containing 0.2 mM TCE as the sole source of carbon and energy, in a day. The optimal pH for growth was within a range of 7.0-8.0. A mixed culture of the four toluene-degrading isolates degraded 95% of 0.2 mM TCE with 1.5 mM toluene as an inducer, whereas no TCE was degraded by the same mixture without an inducer. When a mixed culture of all 6 isolates was used, the degradation efficiency of 0.2 mM TCE was 72% without an inducer, in a day, and 82% with toluene as an inducer. In a continuous treatment, 1,000 mg/1 of TCE in an artificial wastewater was completely removed within 18 h when an activated sludge was used along with the microbial mixture, which was 27 h laster than when only an activated sludge was used. Accordingly, it would appear that such a microbial mixture could be effectively applied to the biological treatment of wastewater containing TCE with or without an inducer.

Alcoholic Liver Cirrhosis with Multiple Pulmonary Consolidations (알코홀성 간경변증에 병발한 다발성 폐경화)

  • Ahn, Young-Soo;Lee, Sang-Moo;Joo, Jong-Eun
    • Tuberculosis and Respiratory Diseases
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    • v.53 no.1
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    • pp.79-84
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    • 2002
  • Pulmonary nocardiosis is an infrequent but severe infection due to the microorganism, Nocardia spp, which may behave as both an opportunists and as a primary pathogens. Usually nocardiosis is found in patients under immunosuppressive regimens for organ transplans, chemotherapy for a malignancy and corticosteroids. The experience of pulmonary nocardiosis in the medical literature is limited to just case reports, with a few series including extrapulmonary nocardiosis. It is believed that the incidence of this infection has been increasing since 1960. The diagnosis is difficult because of the nonspecific clinical manifestations, the lack of laboratory evidence, and the non-specific radiographic findings. Here, we report a case of pulmonary nocardiasis in a 66 year-old patient with alcoholic liver cirrhosis who has suffered from acutely developed dyspnea and general edema. The nocardia species. was cultured from a specimen obtained by a percutaneous transthoracic needle biopsy.

Phylogenetic Inter- and Intrarelationships of the Genus Microbispora of the Family Streptosporangiaceae Based on 16S Ribosomal DNA Sequences (16S Ribosomal DNA 염기서열 분석에 근거한 Streptosporangiaceae과 Microbispora 속의 계통 관계)

  • Lee, Soon-Dong
    • Microbiology and Biotechnology Letters
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    • v.31 no.4
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    • pp.429-434
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    • 2003
  • The 16S rDNA sequences of nine strains, two type strains of validated Microbispora species and a strain of invalidated Microbispora species, and six soil isolates, were determined and compared with those of representatives of the family Streptosporangiaceae. The phylogenetic analysis indicated that all of the validated species of the genus Microbispora consistently formed a monophyletic unit and were well separated from the other genera of the family Streptosporangiaceae. All the isolates were placed to the genus Microbispora, whereas an invalidated Microbispora species, Microbispora griseoalba IMSNU $22049^{T}$ (= KCTC $9314^{T}$), was closely related to members of the genus Nocardia.