• The Plant Pathology Journal
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• v.30 no.2
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• pp.117-124
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• 2014

The plant pathogenic bacterial genus Pectobacteirum consists of heterogeneous strains. The P. carotovorum species is a complex strain showing divergent characteristics, and a new subspecies named P. carotovorum subsp. brasiliensis has been identified recently. In this paper, we re-identified the P. carotovorum subsp. brasiliensis isolates from those classified under the subspecies carotovorum and newly isolated P. carotovorum subsp. brasiliensis strains. All isolates were able to produce plant cell-wall degrading enzymes such as pectate lyase, polygalacturonase, cellulase and protease. We used genetic and biochemical methods to examine the diversity of P. carotovorum subsp. brasiliensis isolates, and found genetic diversity within the brasiliensis subsp. isolates in Korea. The restriction fragment length polymorphism analysis based on the recA gene revealed a unique pattern for the brasiliensis subspecies. The Korean brasiliensis subsp. isolates were divided into four clades based on pulsed-field gel electrophoresis. However, correlations between clades and isolated hosts or year could not be found, suggesting that diverse brasiliensis subsp. isolates existed.

• Korean Journal of Environmental Biology
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• v.36 no.2
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• pp.150-155
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• 2018

Two siphonous green algae were collected from the eastern coast of Korea. These species share the typical features of Derbesia sporophytes, such as erect and prostrate siphonous filaments and the presence of basal septum in lateral branches. One is characterized by the combined features of a relatively small tufted sporophytic thalli arising from a rhizoidal base, subdichotomously branched filaments with a basal septum and one pyrenoid per subspherical to lenticular chloroplast. The other shows a larger sporophytic thallus, sparsely subdichotomously branched filaments with a basal septum and one pyrenoid per spherical chloroplast. In a phylogenetic tree based on rbcL sequence, the two above-mentioned Korean algae nest in the same clades as Derbesia minima and D. indica, respectively. The genetic distance between the sequences within the clades was 0.5-0.8%, which is considered to be included in the intra-specific range for the genus. These two siphonous Korean algae are identified as D. minima and D. indica, respectively, based on the morphological and molecular analyses. These species are newly recorded in the Korean marine algal flora herein.

• Mycobiology
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• v.44 no.2
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• pp.93-98
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• 2016

A new leaf spot disease was observed on leaves of Rheum palmatum (Chinese rhubarb) in Northwest China (Gansu Province) starting in 2005. A Septoria-like fungus was isolated and completion of Koch's postulates confirmed that the fungus was the casual agent of the leaf spot disease. Morphology and molecular methods were combined to identify the pathogen. The fungus produced conidiomata pycnidia and the conidia were 2~5 septate, $61.2{\sim}134.1{\mu}m$ in length and $3.53{\sim}5.3{\mu}m$ in width, which is much larger than the known Spetoria species that infects Polygonaceae species. Phylogenic analysis of the internal transcribed spacer region confirmed that this Septoria-like fungus is within the Septoria genus but distinct from known Septoria species. Together, these morphological and phylogenetic data support that the R. palmatum infecting Septoria strain is a newly-described plant pathogenic species.

• Archives of Pharmacal Research
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• v.28 no.10
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• pp.1147-1151
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• 2005

A new naturally occurring sterol, compound 5, and six known stigmasterols were isolated from fruits of Ailanthus altissima Swingle by repeated column chromatography and RP-HPLC. Their structures were identified as, 5${\alpha}$-stigmastane-3,6-dione (1), 3${\beta}$-hydroxystigmast-5-en-7-one (2), stigmast-5-ene-3${\beta}$, 7${\alpha}$-diol (3), 6${\alpha}$-hydroxystigmast-4-en-3-one (4), 5${\alpha}$-stigmastane-3${\beta}$, 6${\beta}$-diol (5), stigmast-4-ene-3${\beta}$, 6${\alpha}$-diol (6), stigmast-5-ene-3${\beta}$, 7${\alpha}$, 20$\xi$-triol (7) by spectral analysis and comparison with the published data. These compounds have not been reported from genus Ailanthus, whereas compound 7 was identified by NMR for the first time. In addition, the $95\%$ ethanol extract and compounds from the fruits of Ailanthus altissima SWINGLE were assayed for in vitro antimicrobial activity. The extract was potent active against the assayed bacteria while compounds 3 and 7 exhibited moderate activity.

• The Korean Journal of Mycology
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• v.7 no.2
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• pp.75-82
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• 1979

Several higher fungi were collected at Andong during the summer and fall of 1976. About 100 higher fungi were collected at Mt: Sobaek and Youngju during the same period in 1978. These higher fungi were identified. As the results, Macrocystidia proved to be new genus in Korea. And the following are also newly-found species in Korea: Hygrocybe turunda (Fr.) Karst., Hygrophorus lucorum Kalchbr., Macrocystidia cucumis (Fr.) Heim var. latifolia (Lange) Imazeki et Hongo, Agaricus subrufescens Peck, Psathyrella hydrophila (Bull. ex Fr.) A.H. Smith, Stropharia rugosannulata Farlow f. lutea Hongo, Inocybe bresadolae Mass., Inocybe multicoronata A.H. Smith, Russula farinihes Romell and Lactarius sakamotoi Imai.

• Mycobiology
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• v.41 no.4
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• pp.183-190
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• 2013

Amanita Pers. is a well-known monophyletic mushroom genus with a broad distribution. However, the diversity of Korean Amanita species has been underestimated, and most taxonomic studies conducted in Korea have only investigated their morphological characteristics. This approach is frequently insufficient for correct identification in fungal classification; therefore, we constructed a phylogeny of Amanita subgen. Lepidella in order to understand the phylogenetic placements of 16 Amanita specimens collected in Korea in 2012. The phylogeny constructed using the sequence data of the internal transcribed spacers and the partial large subunit of ribosomal RNA identified nine Amanita species (A. citrina, A. excelsa var. spissa, A. flavipes, A. fritillaria, A. oberwinklerana, A. pallidorosea, A. rubescens, A. subjunquillea, and A. volvata); of these, A. fritillaria, A. oberwinklerana, and A. pallidorosea are new to Korea.

• Mycobiology
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• v.46 no.3
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• pp.177-184
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• 2018

The genus Trichoderma (Hypocreaceae, Ascomycota) consists of globally distributed fungi. Among them, T. harzianum, one of the most commonly collected Trichoderma species, had been known as a polyphyletic or aggregate species. However, a total of 19 species were determined from the polyphyletic groups of T. harzianum. Thus, we explored Korean "T. harzianum" specimens that were collected in 2013-2014. These specimens were re-examined based on a recent study with translate elongation factor 1-alpha ($EF1{\alpha}$) sequences to reveal cryptic Trichoderma species in Korea. As a result, four different species, T. afroharzianum, T. atrobruneum, T. pyramidale, and T. harzianum, were identified. Except T. harzianum, the other three species have not been reported in Korea. In this work, we describe these species and provide figures.

• Journal of Applied Biological Chemistry
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• v.61 no.3
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• pp.233-238
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• 2018

Chitinases are glycosyl hydrolases which cleave the ${\beta}$-1,4 linkage of chitin into oligo or monomers of N-acetylglucosamine. These bacterial enzymes have been used for a wide range of applications in the food and pharmaceutical industries. In this study, we isolated two potential chitinolytic strains, BAO-01 and BAO-02, from salt-fermented shrimp, which were shown to belong to the genus Salinivibrio through genetic characterization using 16S rRNA. These isolates were gram-positive, rod-shaped, and non-spore forming. BAO-01 showed greater growth and chitinase activity than BAO-02 after the incubation at $37^{\circ}C$ for 4 days. Both strains grew on a wide range of carbon and nitrogen sources, pH values, temperatures, and salt levels. However, they showed minor biochemical differences. In addition, their antimicrobial activities against foodborne pathogens and antibiotic susceptibilities were evaluated. These Salinivibrio spp. did not show bioamine production, hemolytic activity, and mucin degradation. Therefore, the in vitro screening results suggested that these bacteria could be widely used as new candidates for chitin hydrolyzation and seafood fermentation.

• Korean Journal of Plant Taxonomy
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• v.38 no.1
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• pp.63-68
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• 2008

We report a taxon of the unrecorded genus Knorringia (Polygonaceae) from Baengryeongdo, Ongin-gun, Incheon-si in the Korean peninsula. This taxon is K. sibirica (Laxm.) Tzvelev subsp. sibirica., has been known from Siberia, Mongolia and China. The new Korean name, 'Si-be-ri-a-yeo-kkwi', was given considering the species epithet and the type locality, Siberia. Description, illustration and photograph showing habitat were given.

• Korean Journal of Ichthyology
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• v.26 no.4
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• pp.340-344
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• 2014

A single specimen of Pseudocaranx dentex (115.8 mm in standard length), belonging to the family Carangidae, was firstly collected by a set net in the coastal waters of Jeju Island on July 14, 2014. This species was characterized by a yellow stripe presented along both sides, a single series of canine teeth arranged on jaws, a black spot on upper margin of opercle, and snout length longer than eye diameter. We newly add this species to the Korean fish fauna and propose its Korean name "Heuk-jeom-jul-jeon-gaeng-i-sok" and "Heuk-jeom-jul-jeon-gaeng-i" for the genus and species, respectively.