• Title/Summary/Keyword: Natural Degradation

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DNA Damage-inducible Phosphorylation of p53 at Ser20 is Required for p53 Stabilization

  • Yang, Dong-Hwa;Rhee, Byung-Kirl;Yim, Tae-Hee;Lee, Hye-Jin;Kim, Jungho
    • Animal cells and systems
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    • v.6 no.3
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    • pp.263-269
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    • 2002
  • The p53 tumor suppressor gene is among the most frequently mutated and studied genes in human cancer, but the mechanisms by which it sur presses tumor formation remain unclear. DNA damage regulates both the protein levels of p53 and its affinity for specific DNA sequences. Stabilization of p53 in response to DNA damage is caused by its dissociation from Mdm2, a downstream target gene of p53 and a protein that targets p53 for degradation in the proteosome. Recent studies have suggested that phosphorylation of human p53 at Ser20 is important for stabilizing p53 in response to DNA damage through disruption of the interaction between Mdm2 and p53. We generated mice with an allele encoding changes at Ser20, known to be essential for p53 accumulation following DNA damage, to enable analyses of p53 stabilization in vivo. Our data showed that the mutant p53 was clearly defective for full stabilization of p53 in response to DNA damage. We concluded that Ser20 phosphorylation is critical for modulating the negative regulation of p53 by Mdm2, probably through phosphorylation-dependent inhibition of p53-Mdm2 interaction in the physiological context.

Habitat Quality Valuation Using InVEST Model in Jeju Island (InVEST 모델을 이용한 서식처 가치 평가 - 제주도를 중심으로 -)

  • Kim, Teayeon;Song, Cholho;Lee, Woo-Kyun;Kim, Moonil;Lim, Chul-Hee;Jeon, Seong Woo;Kim, Joonsoon
    • Journal of the Korean Society of Environmental Restoration Technology
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    • v.18 no.5
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    • pp.1-11
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    • 2015
  • Jeju Island is managed intensively in terms of environmental and ecological aspect because of its extraordinary ecosystem types comprising numerous rare, protected flora and fauna. To depict rapid change of habitat status in Jeju Island, the InVEST Habitat Quality model has been operated and compared analytically with the Eco-Natural map. The Habitat Quality map of Jeju Island is turned out to have similar inclination with Eco-Natural map. We compared the average habitat quality value in each Eco-natural map class in Jeju Island and the habitat quality value of first second third grade and non-included area decreased as 0.95 0.76, 0.53 and 0.37 in eco natural map respectively. Compared to biodiversity map based on biological investigation, the result of the InVEST habitat quality model can be simply obtained by land cover map with threat and sensitivity data. Further studies are needed to make explicit coefficients for Jeju Island and Korean peninsula, then the Habitat Quality model could be applied to past and future scenarios to analyze extent of habitat degradation in time series to help decision makers.

Antioxidant potential of aerial part of Asclepias curassavica. Linn (Family-Asclepiadaceae)

  • Raja, S;Ahamed, KFH Nazeer;Kumar, V;Mukherjee, Kakali;Bandyopadhyay, Arun;Mukherjee, Pulok K
    • Advances in Traditional Medicine
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    • v.5 no.2
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    • pp.92-99
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    • 2005
  • Asclepias curassavica. Linn, an erect, simple (or) much branched perennial herb with a somewhat woody base, belonging to the family Asclepiadaceae. It has been reported to have multiple pharmacological effect of anti-inflammatory, cardiotonic, anticancer, anthelmintic and to treat piles and gonorrhoea. It is to be expected that several activities might be related to a possible antioxidant action from this plant. The hydro alcoholic extract of Asclepias curassavica was tested in vitro for its antioxidant activities, such as DPPH radical, nitric oxide radical, superoxide anion radical, lipid peroxidation assay, hydroxyl radical, reducing power, and total phenol content. The extract exhibited scavenging potential with $IC_{50}$ value of $8.7\;{\mu}g/ml,\;198.4\;{\mu}g/ml\;and\;21.7\;{\mu}g/ml$ for DPPH, nitric oxide and superoxide anion radicals. The values were found to higher than those of Vitamin-C, rutin, and curcumin, as standards. The extract showed 50% protection at the dose of $134.2\;{\mu}g/ml\;and\;41.4\;{\mu}g/ml$ in lipid peroxidation as well as deoxyribose degradation, those values more to that of standard, vitamin E $(IC50\;values,\;119.2\;{\mu}g/ml\;and\;32.5\;{\mu}g/ml,\;respectively)$. The reducing power of the extract depends on the concentration and amount of extract. Since a significant amount of polyphenol could be detected by the equivalent to $0.0495\;{\mu}g$ of pyrocatechol from 1 mg of extract. It can be concluded that hydro alcoholic extract of aerial part of Asclepias curassavica could be considered as potent antioxidant, which makes it suitable for the prevention of human disease.

Activation of PKC-$\beta$II-is Required for Vitamin E-Succinate-Induced Apoptosis of U937 Cells

  • Kim, Song-Ja;Park, Jae-Han;Lee, Sun-Ryung;Bang, Ok-Sun;Kang, Shin-Sung
    • Animal cells and systems
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    • v.4 no.3
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    • pp.279-285
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    • 2000
  • Vitamin E-succinate (VES) treatment of U937 human monoblasts induced cells to undergo apoptosis. After 96 h of VES treatment at 10 $\mu$/ml, more than 80% of cells appeared apoptotic. Evidence for apoptosis by VES was based on propidium iodide staining for detection of chromatin condensational fragmentation and electrophoretic DNA ladder formation. Western blot analyses showed a transient increase in Fas and p21 protein levels up to 48 h alter the VES treatment. Protein expression and activity of CDK1 and lamin B degradation were remarkably induced by VES, following the cleavage of caspase-3 after 48 h. The VES-induced apoptosis was found to involve activation of PKC as shown by increases in membrane translocation of PKC$\beat$II and PKC activity. Pretreatment of GF109203X (PKC inhibitor) prior to VES treatment almost completely inhibited the induction of apoptosis as assessed by blockage of VES-induced caspase-3 activity and DNA fragmentation. However, GF109203X h8d no effect on the VES-induced nitric oxide synthesis, which was required for monocvtic differentiation in our previous report (J Cell Sci 111, 435, 1998). Taken together, our data suggest that induction of apoptosis by VES in U937 cells occurs through activation of PKC-$\beat$II resulting in the activation of caspase-3 cascade and is independent of nitric oxide.

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Purification and Characterization of Endo-polygalacturonase Produced by Plant Pathogenic fungus, Botrytis cinerea (식물 병원진균 Botrytis cinerea가 생산하는 Endo-polygalacturonase의 순수정제와 특성)

  • Kim, Byung-Young;Lee, Tae-Ho;Rha, Eu-Gene;Chung, Young-Ryun;Lee, Chang-Won;Kim, Jae-Won
    • The Korean Journal of Mycology
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    • v.25 no.4 s.83
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    • pp.330-339
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    • 1997
  • Botrytis cinerea T91-1 has shown to produce at least four different polygalacturonases in a liquid medium containing citrus pectin as a carbon source. One of the enzymes, its molecular weight was estimated as 37 kDa by denatured polyacrylamide gel electrophoresis, was purified by a series of procedures including acetone precipitation, ion exchange, heparin affinity, and reverse phase column chromatographies. By viscometric analysis, the enzyme was revealed as an endo-polygalacturonase. The enzyme activity was inhibited by divalent cations such as $Ca^{2+}$, $Co^{2+}$, and $Cu^{2+}$. Km and Vmax for polygalacturonic acid hydrolysis were 0.33 mg/ml and 28.6 nM/min, respectively. The optimum temperature for enzymatic activity was $55^{\circ}C$ and the enzyme showed optimal pH values between 4.0 and 4.5. The enzyme was stable up to 12 hours in the range of pH 4 to 7 and at the temperature below $30^{\circ}C$. Amino acid sequence from N-terminal up to 6 amino acids determined by Edman degradation showed little homology with polygalacturonases from fungi and plants.

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A Study on Damage Factors and Causes of Natural Forest in Regional Ecological Network at Chungnam Province (충남 광역생태네트워크 자연녹지의 훼손 인자 및 원인에 관한 연구)

  • Lee, Jong-Mun;Cho, Yong-Hyeon;Kim, Kwang Dong;Lee, Minwoo;Kim, Jinki;Choi, Jung-Kwon;Kim, Won-Tae;Yun, Chung-Weon;Kang, Hee-Kyoung
    • Journal of the Korean Society of Environmental Restoration Technology
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    • v.18 no.6
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    • pp.97-110
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    • 2015
  • This study aimed to classify damaged lands, to find what are the damage factors affecting the studied area, and to present a prescription in order to provide some benefit for the restoration of Regional Ecological Network at Chungnam province. Finally we classified damaged lands from 1st to 4th damaged lands according to relative intensity of damage. The main damage factors for the First Damage Lands were humus horizon, soil hardness and plant species richness. In the Second Damage Lands, those were soil hardness, plant species richness, number of plants and dominant plant species. In the Third Damage Lands, those were humus horizon, soil hardness, plant species richness, number of plants and dominant plant species. In the Fourth Damage Lands, those were humus horizon, organic matter, soil hardness, EC, T-N content, plant species richness, number of plants and dominant plant species. In every cases, the damage of soil and vegetation was originated due to development carried out by human being. The changes in soil condition were not big enough for it to affect plant growth, however, degradation of vegetation was still severe.

The Origin and Biogeochemistry of Organic Matter in Surface Sediments of Lake Shihwa and Lake Hwaong

  • Won, Eun-Ji;Cho, Hyen-Goo;Shin, Kyung-Hoon
    • Ocean Science Journal
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    • v.42 no.4
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    • pp.223-230
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    • 2007
  • To understand the origin and biogeochemistry of the organic matter in surface sediments of Lake Shihwa and Lake Hwaong, organic nitrogen, inorganic nitrogen, labile organic carbon, and residual organic carbon contents as well as stable isotope ratios for carbon and nitrogen were determined by KOBr-KOH treatment. Ratios of organic carbon to organic nitrogen $(C_{org}/N_{org})$ (mean = 24) were much higher than ratios of organic carbon to total nitrogen $(C_{org}/N_{tot})$ (mean= 12), indicating the presence of significant amounts of inorganic nitrogen in the surface sediments of both lakes. Stable isotope ratios for organic nitrogen were, on average, $5.2\%_{\circ}$ heavier than ratios of inorganic nitrogen in Lake Shihwa, but those same ratios were comparable in Lake Hwaong. This might be due to differences in the origin or the degree of degradation of sedimentary organic matter between the two lakes. In addition, stable isotope ratios for labile organic carbon were, on average, $1.4\%_{\circ}$ heavier than those for residual organic carbon, reflecting the preferential oxidation of $^{13}C$-enriched organic matter. The present study demonstrates that KOBr-KOH treatment of sedimentary organic matter can provide valuable information for understanding the origin and degradation state of organic matter in marine and brackish sediments. This also suggests that the ratio of $(C_{org}/N_{org})$ and stable isotope ratios for organic nitrogen can be used as indexes of the degree of degradation of organic matter.

Rice 7-Hydroxymethyl Chlorophyll a Reductase Is Involved in the Promotion of Chlorophyll Degradation and Modulates Cell Death Signaling

  • Piao, Weilan;Han, Su-Hyun;Sakuraba, Yasuhito;Paek, Nam-Chon
    • Molecules and Cells
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    • v.40 no.10
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    • pp.773-786
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    • 2017
  • The loss of green coloration via chlorophyll (Chl) degradation typically occurs during leaf senescence. To date, many Chl catabolic enzymes have been identified and shown to interact with light harvesting complex II to form a Chl degradation complex in senescing chloroplasts; this complex might metabolically channel phototoxic Chl catabolic intermediates to prevent oxidative damage to cells. The Chl catabolic enzyme 7-hydroxymethyl Chl a reductase (HCAR) converts 7-hydroxymethyl Chl a (7-HMC a) to Chl a. The rice (Oryza sativa) genome contains a single HCAR homolog (OsHCAR), but its exact role remains unknown. Here, we show that an oshcar knockout mutant exhibits persistent green leaves during both dark-induced and natural senescence, and accumulates 7-HMC a and pheophorbide a (Pheo a) in green leaf blades. Interestingly, both rice and Arabidopsis hcar mutants exhibit severe cell death at the vegetative stage; this cell death largely occurs in a light intensity-dependent manner. In addition, 7-HMC a treatment led to the generation of singlet oxygen ($^1O_2$) in Arabidopsis and rice protoplasts in the light. Under herbicide-induced oxidative stress conditions, leaf necrosis was more severe in hcar plants than in wild type, and HCAR-overexpressing plants were more tolerant to reactive oxygen species than wild type. Therefore, in addition to functioning in the conversion of 7-HMC a to Chl a in senescent leaves, HCAR may play a critical role in protecting plants from high light-induced damage by preventing the accumulation of 7-HMC a and Pheo a in developing and mature leaves at the vegetative stage.

Red Pigment of the Korean Cockcomb Flower: Color Stability of the Red Pigment (한국산 맨드래미 꽃의 적색 색소 : 적색 색소의 식품학적 안정성)

  • Lee, S.Y.;Cho, S.J.;Lee, K.A.;Byun, P.H.;Byun, S.M.
    • Korean Journal of Food Science and Technology
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    • v.21 no.3
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    • pp.446-452
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    • 1989
  • The pigment of the Korean cockscomb flower, a betacyanin, was evaluated for its stability in terms of temperature, pH, and its behavior upon exposure to water, light, and air. The pigment was the most stable at pH 4.0, and its activation energy (Ea) for degradation was shown to be 17.55Kcal/mol. In general, sugars protected against color degradation at the concentration of 0.1M. Degradation of this pigment in the presence of food constituents, such as organic acids , metal ions, or antioxidants, at the concentrations normally present in food preparations, can be kept to a minimum by selective adjustment of conditions. This pigment, therefore, has potential value as a food colorant under selected conditions.

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Fundamental Study on Developing Embedded Mini-Sensor for Nondestructive Diagnosis Corrosion of Rebar (비파괴 철근 부식 진단을 위한 매립형 미니센서 개발에 관한 기초적 연구)

  • Joh, Sung-Hyung;Lim, Young-Chul;Ismail, Mohamed;Lee, Han-Seung
    • Journal of the Korea institute for structural maintenance and inspection
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    • v.14 no.6
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    • pp.179-187
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    • 2010
  • Corrosion of rebar embedded reinforced concrete is the main cause of collapse and degradation of reinforced concrete structure. Degradation occurs in reinforced concrete structures from corrosion caused by the Chloride that the damage other than the severe degradation of the structure in terms of maintenance and construction when the huge expense required and deciding terms is hard. Therefore, early detection of rebar corrosion is important for efficient maintenance and repairing and planning. Meanwhile, how to evaluate the corrosion of the non-destructive measurements have been used a lot. In particular CM-II (corrosion meter) is used to measurement the natural potential, polarization resistance and the resistivity of the concrete, but has some disadvantages. Embedded mini-sensor has been developed in order to overcome these disadvantages. So Measurement corrosion for using the mini-sensor compares with the measured results CM-II (corrosion meter), the developed mini-sensor verify the validity.