• Korean Journal of Microbiology
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• v.53 no.4
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• pp.320-322
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• 2017

A betaproteobacterium strain GR16-43 was isolated from a surface layer of the Geomnyong Pond in Republic of Korea by a dilution-to-extinction culturing method. We report the whole genome sequence of the strain GR16-43, which contains 4,806,848 bp with a G + C content 67.12%, and to include 4,424 protein-coding genes and 47 transfer RNA genes. The genome was determined to contain the genes encoding carbon monoxide dehydrogenase, nitrate reductase, nitrite reductase, nitric oxide reductase, and the sulfur oxidation (sox) gene cluster, highlighting the potential importance of the bacterial group represented by the strain in the cycling of inorganic elements. These results indicate that strain GR16-43 genome showed several traits indicating adaptation of the bacteria to living in freshwater environments.

• The Korean Journal of Mycology
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• v.49 no.2
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• pp.183-197
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• 2021

Various freshwater ecosystems, such as streams, lakes and rivers, provide a dynamic habitat for fungi. In this study, we isolated several fungal strains from freshwater sediment and plant litter. The strains were identified using molecular phylogenetic analyses of rDNA and beta tubulin (TUB) sequences. Morphological characteristics of the fungi were also investigated using microscopy and culture characteristics of the fungi grown on several media. We identified seven species previously unrecorded in Korea, Nothophoma spiraeae, Westerdykella aquatica, W. aurantiaca, W. dispersa, Chrysosporium sanyaense, C.pseudomerdarium and Taeniolella phialosperma.

• The Korean Journal of Mycology
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• v.48 no.4
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• pp.491-498
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• 2020

In this study, we aimed to observe the diversity of aquatic fungi by collecting deposits of soil, plants, and plant litter from streams and rivers. Three Penicillium strains were isolated from soil in streams. Based on the morphological characteristics and phylogenetic analysis using DNA sequences of the internal transcribed spacer, β-tubulin and calmodulin genes, the isolates were identified as Penicillium guanacastense, P. saturniforme, and P. scabrosum. These three fungi have not yet been reported in Korea.

• Animal Systematics, Evolution and Diversity
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• v.40 no.1
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• pp.108-111
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• 2024

Three species of seed beetles, Acanthoscelides pallidipennis (Motschulsky, 1874), Bruchidius terrenus (Sharp, 1886), and Kytorhinus senilis Solsky, 1869, from South Korea are reported for the first time. These three species can be morphologically distinguished from other Korean bruchid species by the distinctive color pattern of the elytra, presence of subapical spines on hind femur, and exposed last three tergites of abdomen, respectively. In this study, partial sequences of mitochondrial cytochrome c oxidase subunit I from Korean specimens of these species were generated. In addition, host plants, distribution maps, and photographs of the dorsal habitus and live specimens of each species are also included.

• Journal of Environmental Impact Assessment
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• v.23 no.5
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• pp.393-405
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• 2014

In this study, the nonpoint sources were evaluated by calculating the Nadonggang basin regional water quality and nonpoint source pollution load discharged. And were selected the banks of first administration based on the results and the direction of the next administration. As a results of estimating the water quality about BOD concentration in the mid influence area in the Nakdonggang basin, it was founded that 10 sites for 'Ia' water quality level, 6 sites for 'lb' water quality level, 5 sites for 'II' water quality level, 1 sites for 'I' water quality level. The estimation of COD concentration in the mid influence area, It showed that 9 sites for 'Ib' water quality level, 6 sites for 'II' water quality level, 6 sites for 'III' water quality level, 1 site for 'IV' water quality level. The assessment of water quality made Mid influence area of Gumhogang, Nakdong Goryung, Nakdong Milyang and Namgang selected as the mid influence area of high pollution. And delivery loads of nonpoint sources were calculated for mid influence area in Nakdonggang basin(max delivery load : 17,706.7 kg/day for Gumhogang influence area). As the result of calculating NPS(nonpoint sources) delivery load and water quality at influence area in Nakdonggang basin, Gumhogang influence area was selected as an area for management priority among nonpoint sources.

• Korean Journal of Ichthyology
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• v.35 no.4
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• pp.217-223
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• 2023

The 886-bp sequence of the mitochondrial region encoding the cytb gene was used to identify the origin of the Goryeong (GR) population of Pungitius kaibarae and to characterize genetic diversity and structure among wild populations. The GR population showed the lowest haplotype diversity (H_d=0.000), while the highest haplotype diversity was confirmed at 0.755 among the Goseoung (GS) population. Nucleotide diversity ranged was the highest diversity at 0.00291 in the GS population and the lowest diversity at 0.00000 in the GR population. The GR population was genetically closest to the Pohang (PH) population. The haplotype network confirmed that the GR population was most similar to the PH population. The GR population also clustered with the PH population with high bootstrap support (98%) in a phylogenetic tree. We thus conclude that the GR population is derived from a population similar to the PH population.

• The Korean Journal of Mycology
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• v.46 no.3
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• pp.213-225
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• 2018

Trichoderma (Hypocreaceae) is one of the most ubiquitous genera worldwide. This genus has an excellent ability to adapt to diverse environments, even under poor nutritional conditions, such as in freshwater. However, little is known about the diversity of Trichoderma species in freshwater environments. In this study, we isolated diverse fungal strains from algae, plant litter, and soil sediment in streams in Korea. The strains were identified based on molecular phylogenetic analyses of internal transcribed spacer (ITS) rDNA and translation elongation factor 1 ($TEF1{\alpha}$) sequences. We also investigated their morphological characteristics by microscopic observation and determination of cultural features on different media. As a result, six Trichoderma species were found in Korea: T. afroharzianum, T. capillare, T. guizhouense, T. paraviridescens, T. reesei, and T. saturnisporum. Interestingly, T. paraviridescens showed both cellulose activity and hypoxia stress tolerance phenotypes, indicating its role as a decomposer in freshwater ecosystems. Our study revealed that freshwater environment could be a good candidate for investigating the species diversity of Trichoderma.

• Korean Journal of Ecology and Environment
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• v.53 no.2
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• pp.109-137
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• 2020

Upo Wetland is the largest riverine wetland in Korea which has been inscribed on the Ramsar List of Wetlands of International Importance in 1998. In this study, sedimentological study was carried out in order to understand the environmental changes in Upo Wetland during the Holocene. The drilling work for recovering the Quaternary sediments was conducted on the inner part (UPW17-01, UPW17-02, and UPW17-03) and the outer part (UPL17-01, UPL17-02) of the Upo Wetland. The recovered sediments are commonly characterized by gravel-dominated deposits in the lower part and silty clay-dominated deposits in the middle to upper parts respectively, which are seemed to be changed from fluvial to palustrine/lacustrine environments around 4,000 cal yr BP. In order to establish the Holocene diatoms distribution from Upo Wetland, we identified 63 diatom taxa. Of these, 14 species were new records for Korea: Gomphonema consector, Gomphonema jadwigiae, Hantzschia abundans, Luticola pseudomurrayi, Luticola spauldingiae, Neidium suboblongum, Ninastrelnikovia gibbosa, Oricymba rhynchocephala, Pinnularia borealis var. lanceolata, Pinnularia latarea, Pinnularia paliobducta, Pinnularia saprophila, Sellaphora laevissima, Stauroneis pseudoschimanskii. All identified diatom species are illustrated by high-quality scanning electron microscopic and light microscopic microphotographs. The ecological habitat for all taxa are presented.

• The Korean Journal of Mycology
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• v.47 no.2
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• pp.165-172
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• 2019

To investigate the diversity of aquatic fungi, we collected deposits of soil, plants, and plant litter from ponds and streams. NNIBRFG1552 was isolated from soil deposits and NNIBRFG3013 from plant deposits in Namsaengi-mot in Jeju, Korea in 2016; NNIBRFG5472 was isolated from plant litter in Bocheong-cheon, Boeun, Korea in 2018. Based on morphological characteristics and phylogenetic analysis using rDNA sequences of the internal transcribed spacer (ITS), NNIBRFG1552, NNIBRFG3013, and NNIBRFG5472 were identified as Filoporella exilis (100% similarity with KC834046), F. fistucella (99.8% with KC834047), and F. cf. annelidica (100% with KC834044), respectively. Furthermore, cultural and morphological characteristics were analyzed to confirm the molecular identification. No species of the genus Filosporella has yet been reported in Korea.

• The Korean Journal of Mycology
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• v.51 no.4
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• pp.349-359
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• 2023

Freshwater ecosystems are significant habitats of fungi including yeasts. This study aimed to isolate and characterize wild yeasts from freshwater environments in Korea. The yeast isolates were identified by using the D1/D2 domains of the 26S rDNA regions. We identified four strains, Candida viswanathii (NNIBRFG39781), Curvibasidium cygneicollum (NNIBRFG49003), Oberwinklerozyma silvestris (NNIBRFG39803) and Vishniacozyma foliicola (NNIBRFG6120). These yeasts had not previously been recorded in Korea. We investigated the morphological and cultural characteristics of these yeasts. All of them grew on YPD, PD and YM media. Candida viswanathii (NNIBRFG39781), O. silvestris (NNIBRFG39803) and V. foliicola (NNIBRFG6120) grew in YPD medium containing glucose and in pH range of 4-8. Curvibasidium cygneicollum (NNIBRFG49003) grew well low temperature compared to others and slowly.