• Title/Summary/Keyword: NLS

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A simple method for detection of CMV viral RNAs and satellite RNAs in Korean pepper.

  • J.H. Sung;Park, J.H.;H.Y. Shin;M.U. Chang;H. Sayama;H. Atarashi
    • Proceedings of the Korean Society of Plant Pathology Conference
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    • 2003.10a
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    • pp.150.3-151
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    • 2003
  • To analyze the genome of Cucumber mosaic virus(CMV) in pepper, we developed a new extraction method for double-stranded RNA(dsRNA). To isolate the dsRNA, 0.1g of pepper leaves homogenized with 1ml of 5${\times}$EXB extraction buffer[0.5M glycin, 0.5M NaCl, 5mM EDTA(pH9.0/NaOH), 10% Sodium N-lauryl salcosinate(NLS), 10% Sodium dodecylsulfate(SDS)] and purified with the 1/4 volume of phenol: chloroform: isoamylalcohol(25:24:1). dsRNAs from the aqueous phase was precipitated with isopropanol. This procedure was able to detect a minimal amount of dsRNA from CMV infected plant tissue and to distinguish different CMV satellite RNAs by polyacrylamide gel electrophoresis(PAGE). Moreover, this method can be applied CMV infected in pepper or Rice dwarf virus (RDV) infected rice.

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Prostate Apoptosis Response-4 (Par-4) as a Cancer Therapeutic Target (암 치료 표적으로써 prostate apoptosis response-4 (Par-4))

  • Woo, Seon Min;Kwon, Taeg Kyu
    • Journal of Life Science
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    • v.25 no.8
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    • pp.947-952
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    • 2015
  • Prostate apoptosis response-4 (Par-4) was originally identified in androgen-independent prostate cancer cells undergoing apoptosis. Par-4 is ubiquitously expressed in normal cells and tissues, but it is downregulated in several types of cancers. Par-4 is a 38 kDa tumor suppressor protein encoded by the PARW gene. Par-4 promotes apoptosis in a variety of cancerous cells, but not in normal cells. In this review, we focused on the structure, expression and function of Par-4 in apoptotic signaling pathway. Functional domains of Par-4 include two nuclear localization sequences (NLS), a leucine zipper (LZ) domain, a nuclear export sequence (NES) and selective for apoptosis in cancer cell (SAC) domain. Many studies have underlined the importance of Par-4 in preventing cancer development. The activity of Par-4 is differently regulated by localization of intracellular and extracellular Par-4. Intracellular Par-4 inhibits Akt- and NF-κB-mediated cell survival pathways and downregulates Bcl-2 expression. Extracellular Par-4 activates the extrinsic apoptotic pathway by binding to cell surface receptor GRP78, a stress response protein that is in the endoplasmic reticulum (ER). Endogenous Par-4 sensitizes cancer cells to various apoptotic stimuli, while exogenous Par-4 enhances SAC domain-dependent apoptosis in cancer cells, but not normal cells. Therefore, Par-4 is an attractive target for cancer therapy.

Protein transduction of an antioxidant enzyme: subcellular localization of superoxide dismutase fusion protein in cells

  • Kim, Dae-Won;Kim, So-Young;Lee, Hwa;Lee, Yeum-Pyo;Lee, Min-Jung;Jeong, Min-Seop;Jang, Sang-Ho;Park, Jin-Seu;Lee, Kil-Soo;Kang, Tae-Cheon;Won, Moo-Ho;Cho, Sung-Woo;Kwon, Oh-Shin;Eum, Won-Sik;Choi, Soo-Young
    • BMB Reports
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    • v.41 no.2
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    • pp.170-175
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    • 2008
  • In protein therapy, it is important for exogenous protein to be delivered into the target subcellular localization. To transduce a therapeutic protein into its specific subcellular localization, we synthesized nuclear localization signal (NLS) and membrane translocation sequence signal (MTS) peptides and produced a genetic in-frame SOD fusion protein. The purified SOD fusion proteins were efficiently transduced into mammalian cells with enzymatic activities. Immunofluorescence and Western blot analysis revealed that the SOD fusion proteins successfully transduced into the nucleus and the cytosol in the cells. The viability of cells treated with paraquat was markedly increased by the transduced fusion proteins. Thus, our results suggest that these peptides should be useful for targeting the specific localization of therapeutic proteins in various human diseases.

Lipid Components of the Cultured Pearl Oyster (Pinctada fucata martensii) in Korea

  • Moon Soo-Kyung;Kang Ji-Yeon;Kim Kyeong-Dae;Kim In-Soo;Jeong Bo-Young
    • Fisheries and Aquatic Sciences
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    • v.8 no.4
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    • pp.189-194
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    • 2005
  • Protein, lipid classes, and fatty acid composition, including n-3 highly unsaturated fatty acids (HUFAs), were analyzed in the soft parts, which we differentiated as the adductor muscles and 'other portions,' from the cultured pearl oyster after the pearl was harvested and before the nucleus was grafted to evaluate the nutritional qualities of the soft parts. Total lipid content was higher in the other portions of the soft parts ($1.25-1.26\%$) than in the adductor muscles ($0.58­0.65\%$) in both pearl oyster samples, whereas protein content was higher in the latter ($15.5­18.7\%$) than in the former ($11.2-13.9\%$; P<0.05). The percentage of total lipids (TLs) consisting of phospholipids (PLs) was higher in the adductor muscles ($60.4-68.3\%$) than in the other portions ($40.6-47.0\%$), but the percentage of nonpolar lipids (NLs) was higher in the other portions of the soft parts. The prominent lipid classes were free sterol (FS) and triglyceride (TG) in the NLs and phosphatidylcholine and phosphatidylethanolamine in the PLs. The adductor muscles contained high levels of FS and all PL classes, while the other portions contained high levels of all NL classes, especially TG (but not FS; P<0.05). The prominent fatty acids were 22:6n-3 ($17.2-24.9\%$), 16:0 ($8.35-15.8\%$), 20:5n-3 ($7.95-14.9\%$), 18:0 dimethyl acetal (DMA, $4.79-13.5\%$), 18:0 ($4.50-6.16\%$), and 20:4n-6 ($4.36-5.43\%$). The percentages of 22:6n-3, 20:4n-6, and 18:0 DMA were higher in the adductor muscles than in the other portions of both pearl oyster samples, while those of 20:5n-3 and 16:0 were higher in the other portions (P<0.05). The levels of these food components were similar to those of other bivalves or were higher, especially the protein content, indicating that the soft parts of pearl oysters, which are currently wasted, have food value.

Improving the Wettability of Polymeric Surfaces and Surface Modification of Ceramic by Ion Beam in Reactive gases Environments (반응성 가스 분위기하에서 이온빔을 이용한 폴리머 표면의 친수성 증대 및 세라믹표 면개질)

  • 손용배
    • Journal of the Microelectronics and Packaging Society
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    • v.3 no.1
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    • pp.11-24
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    • 1996
  • 부분압이 다른 여러 가지 반응성 가스분위기하에서 이른곤 이온을 이용하여 PC, PET PMMA 그리고 PTFE 폴리머 표면의 삼차 증류수에대한 진수성을 증대하였다. 폴리머 표면의 친수성의 변화는 여러 가지 반응성 가스 분위기하에서 아르곤 이온의 조사량을 1014 부터 1x1017cm2까지 변화하면서 조사하였다. 접촉감은 아르곤 이온이 조사되는 폴리머 표면 근처에 유입된 가스의 방응성(O2>N2>H2)에 따라 많이 감소하였다, 폴리머 표면에 형성된 친수성기는 XPS Cls, Ols, 그리고 Nls 스펙트럼을 분석하여 확인하였다. 표면 개질된 PC와 PTFE에 대한 Al 금속의 접착력 증대를 Scotch tape와 인장실험을 통하여 확인하였다. 접착 력 증가는 표면 에너지 중 polar force의 증가에 의한 것으로 입증되었다. 에너지를 가진 아 르곤 입자 폴리머 체인 그리고 반응성 가스 사이의 반응기구는 2단계 모델로 설명가능하였 는데 그 기구는 첫 번째 이온의 조사에 의한 불안정한 폴리머 체인의 형성과 두 번째 단계 로 이렇게 형성된 폴리머 체인과 반응성 가스들 사이의 화학반응으로 이루어진다. 질화아루 미늄의 표면을 산소분위기하에서 아르곤 빔을 조사하여 표면개질한후 AlON층이 새롭게 형 성된 것을 XPS를 이용하여 확인할수 있었다. 개질된 질화알루미늄과 구리금속 박막간의 접 착력을 scratch 실험을 통하여 조사하였다.

A DPL (DNA/peptide/liposomes) Tripartite Complex Effective for Transfection in Serum

  • Kim Young-Cheol;Park Jong-Gu
    • Biomedical Science Letters
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    • v.10 no.3
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    • pp.187-194
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    • 2004
  • A short peptide corresponding to the nuclear localization signal (NLS) of human immunodeficiency virus (HIV)-l Tat protein, Arg-Lys-Lys-Arg-Arg-Gln-Arg-Arg-Arg, was employed to improve the efficiency of cellular uptake of nucleic acids. The peptide was first mixed with a reporter plasmid and then with cationic liposomes to form a tripartite complex of DNA/peptide/liposomes (DPL). Transfection efficiency of the DPL complex was compared with that of the conventional DNA/liposomes (DL) complex. When the DPL complex was formed with various cationic liposomes, DOTAP/DOPE (DP) liposome exhibited superior transfection efficiency to other liposomes tested in vitro. With the inclusion of the peptide, the DPL complex showed much enhanced transfection in various cancer cell lines. Particularly, transfection of the DPL complex in serum increased cellular uptake of a transgene up to 2 fold when compared with that in a serum free condition. Further, when the DPL complex was infused through the ureteric route of a rat, transfection efficiency was shown to be better in reporter gene expression than that obtained with the DL complex. This study shows that the DPL complex that is easy to formulate can be employed for much enhanced cellular uptake of a trans gene.

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Effect of Environmental pH on End Products, Fermentation Balances and Bioenergetic As-pects of Lactobacillus bulg-aricus in a Glucose-limited “pH Stat” Continuous Culture.

  • Rhee, Sang-Ki;Pack, Moo-Young
    • Proceedings of the Korean Society for Applied Microbiology Conference
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    • 1979.10a
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    • pp.246.1-246
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    • 1979
  • A glucose-limited “pH-stat” continuous culture study of Lactobacillus bulgaricus NLS-4 in an anaerobic condition showed the marked effects of environmental pH on end products, fermentation blances and bioenergetic aspects of the organism. Lactic acid was the major end product of fermentation with minor products, such as acetic acid, formic acid and ethanol throughout the pH range tested. In acidic conditions below pH 6.5, a typi-cal pattern of homofermentation was revealed whereas in alkaline conditions, the metabolic pattern was changed from homofermentation to heterofermentation and led to acquire much energy. This metabolic change was likely due to the pH-dependent lactate dehydrogenase activity. Molar growth yields (Yglc=35.5-44.4) and YATP, $18.5\pm2.5$ in average which was 80% higher than the value ever postulated seemed to be accounted for less requirement of maintenance energy of the organism in the culture conditions.

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STUDY OF MILLI-JANSKY SEYFERT GALAXIES WITH STRONG FORBIDDEN HIGH-IONIZATION LINES USING THE VERY LARGE ARRAY SURVEY IMAGES

  • LAL, DHARAM V.
    • Journal of The Korean Astronomical Society
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    • v.48 no.6
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    • pp.399-412
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    • 2015
  • We study the radio properties at 1.4 GHz of Seyfert galaxies with strong forbidden highionization lines (FHILs), selected from the Sloan Digital Sky Survey - a large-sized sample containing nearly equal proportion of diverse range of Seyfert galaxies showing similar redshift distributions compiled by using the Very Large Array survey images. The radio detection rate is low, 49%, which is lower than the detection rate of several other known Seyfert galaxy samples. These galaxies show low star formation rates and the radio emission is dominated by the active nucleus with ≤10% contribution from thermal emission, and possibly, none show evidence for relativistic beaming. The radio detection rate, distributions of radio power, and correlations between radio power and line luminosities or X-ray luminosity for narrow-line Seyfert 1 (NLS1), Seyfert 1 and Seyfert 2 galaxies are consistent with the predictions of the unified scheme hypothesis. Using correlation between radio and [O III] λ 5007 Å luminosities, we show that ∼8% sample sources are radio-intermediate and the remaining are radio-quiet. There is possibly an ionization stratification associated with clouds on scales of 0.1-1.0 kpc, which have large optical depths at 1.4GHz, and it seems these clouds are responsible for free-free absorption of radio emission from the core; hence, leading to low radio detection rate for these FHIL-emitting Seyfert galaxies

Enhancement of Source Localization Performance using PMP Method in a Multipath Environment (다중경로 환경에서 PMP기법을 이용한 음원의 위치 추정성능 향상)

  • Lee, Ho Jin;Yoon, Kyung Sik;Shin, Dong Hoon;Lee, Kyun Kyung
    • Journal of the Korea Institute of Military Science and Technology
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    • v.17 no.2
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    • pp.182-188
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    • 2014
  • Source localization is an important problem in the field of sonar and radar, etc. For the purpose of source localization, two or more spatially separated sensors are often used to measure the time difference of arrivals of a radiating source whose transmitted signal waveform is unknown. The NLS(Nonlinear Least Square) cost function with curve fitting method was proposed recently, which provide robust source localization performance by reducing estimation ambiguity. However, even this algorithm shows degraded performance in a multipath environment. To estimates source localization correctly, source localization algorithm that eliminate the effect of multipath signals is required. In this paper, PMP(Power Matching Procedure) is added to the algorithm, which provides improved source localization performance by properly cutting out the effect of multipath signals. Through simulation the performance of the proposed source localization algorithm is verified.

SAR Image De-noising Based on Residual Image Fusion and Sparse Representation

  • Ma, Xiaole;Hu, Shaohai;Yang, Dongsheng
    • KSII Transactions on Internet and Information Systems (TIIS)
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    • v.13 no.7
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    • pp.3620-3637
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    • 2019
  • Since the birth of Synthetic Aperture Radar (SAR), it has been widely used in the military field and so on. However, the existence of speckle noise makes a good deal inconvenience for the subsequent image processing. The continuous development of sparse representation (SR) opens a new field for the speckle suppressing of SAR image. Although the SR de-noising may be effective, the over-smooth phenomenon still has bad influence on the integrity of the image information. In this paper, one novel SAR image de-noising method based on residual image fusion and sparse representation is proposed. Firstly we can get the similar block groups by the non-local similar block matching method (NLS-BM). Then SR de-noising based on the adaptive K-means singular value decomposition (K-SVD) is adopted to obtain the initial de-noised image and residual image. The residual image is processed by Shearlet transform (ST), and the corresponding de-noising methods are applied on it. Finally, in ST domain the low-frequency and high-frequency components of the initial de-noised and residual image are fused respectively by relevant fusion rules. The final de-noised image can be recovered by inverse ST. Experimental results show the proposed method can not only suppress the speckle effectively, but also save more details and other useful information of the original SAR image, which could provide more authentic and credible records for the follow-up image processing.