• Title/Summary/Keyword: NIF

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Studies on Nitrogen-Fixing Microorganisms in Rice Rhizosphere (벼 뿌리 부근에 서식하는 질소고정미생물에 관한 연구)

  • 정건섭;민태익;변유량;유주현
    • Microbiology and Biotechnology Letters
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    • v.13 no.3
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    • pp.251-255
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    • 1985
  • Nitrogen-fixing bacteria were isolated from the rice rhizosphere of various paddy fields in our country. The screening of 235 isolates for nitrogen-fixing ability resulted in the isolation of Enterobacter agglomerans NFB264 and three Klebsiella pneumoniae NFB 3, NFB 320. Plasmids of various molecular weight from 1.7 to more than 84 Mal. were detected by agarose gel electrophoresis in three out of four isolates. But, these plasmids had not any nitrogen-fixing genes. Hybridization experiments using Klebsiella pneumoniae M5al nitrogen-fixing genes, nif Q-K and nif DH, as probes revealed the presence of homologous sequences in the chromosomal DNA of all isolates. However the restriction patterns of nif genes of the isolates by various restriction endonucleases were different to those of Klebsiella pneumoniae M5al.

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Isolation and Identifition of DAP-Auxotrophs from E. coli pRDI (E. coli pRDI에서의 DAP-영양요구성 변이주 분리 및 동정)

  • 이호자
    • Korean Journal of Microbiology
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    • v.22 no.4
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    • pp.265-269
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    • 1984
  • For the utilization as donor cells of conjugation, DAP-Auxotrophs were isolated from C. coli cells, carrying plasmid $p^{RD1}$ with(a) drug resistance makers from Pseudononas $(Km^r, \;Carb^r, \;Tc^r)$ and (b) the nif-gene group from Klebsiela. E. coli $p^{RD1}$ cells were treated with nitrosoguanidine for the mutagenesis and cephalexin for the isolation of DAP-Auxotrophs. The nature of auxotrophs was verified by suitable biochemical test and checking with 6-cyanopurine as a color indicator for the presence of nif-gene.

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Backbone 1H, 15N, and 13C resonance assignments and secondary structure prediction of NifU-like protein, HP1492 from Helicobacter Pylori

  • Lee, Ki-Young;Kang, Su-Jin;Bae, Ye-Ji;Lee, Kyu-Yeon;Kim, Ji-Hun;Lee, Ingyun;Lee, Bong-Jin
    • Journal of the Korean Magnetic Resonance Society
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    • v.17 no.2
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    • pp.105-110
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    • 2013
  • HP1492 is a NifU-like protein of Helicobacter pylori (H. pylori) and plays a role as a scaffold which transfer Fe-S cluster to Fe-S proteins like Ferredoxin. To understand how to bind to iron ion or iron-sulfur cluster, HP1492 was expressed and purified in Escherichia coli (E. coli). From the NMR measurement, we could carry out the sequence specific backbone resonance assignment of HP1492. Approximately 91% of all resonances could be assigned unambiguously. By analyzing results of CSI and TALOS from NMR data, we could predict the secondary structure of HP1492, which consists of three ${\alpha}$-helices and three ${\beta}$-sheets. This study is an essential step towards the structural characterization of HP1492.

Comparison of tear film break-up time and high order aberration according to soft contact lens material (소프트콘택트렌즈 재질에 따른 눈물막 파괴시간과 고위수차의 비교)

  • Kim, Bong-Hwan;Han, Sun-Hee;Kim, Hak-Jun;Bae, Sang-A;Son, Yu-Jin;Kim, Ji-Hyun;KIm, Hyun-Ji
    • Journal of Korean Clinical Health Science
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    • v.7 no.1
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    • pp.1232-1237
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    • 2019
  • Purpose. In this study, two types of soft contact lenses with different materials were selected to compare the time of tear film destruction and high order aberrations before and after wearing. Methods. Thirty patients (60 eyes) in their 20s were included in this study. Two lenses with different materials, Group 4 (Etafilcon A) and Group 5 (Narafilcon A) were selected. Using aberration analyzer and keratometry, high-order aberration and tear film test (NIF-BUT, NIAvg-BUT) were performed before and after wearing. Results. When comparing the higher aberrations of the Etafilcon A and Narafilcon A lenses, the higher aberrations of the Narafilcon A lens were higher overall. For the initial tear film break-up time (NIF-BUT) after wearing, the Etafilcon A lens was reduced by 4.0 seconds and the Narafilcon A lens increased by 0.6 seconds. For the mean tear film break-up time (NIAvg-BUT) after wearing, the Etafilcon A lens decreased by 2.4 seconds and the Narafilcon A lens increased by 1.7 seconds. Conclusions. NIF-BUT and NIAvg-BUT of Narafilcon A lens were increased. The lens with relatively low water content and higher oxygen permeability than the lens with high water content has relatively less tear evaporation, which means that the time of destruction of the tear film is increased.

Characteristics of Indigenous Rhizobium to Korean Soils -I. Symbiotic Potentials of Bradyrhizobium japonicum Populations and Their Colony Morphological Characteristics in Yeongnam Soils (우리나라 토착근류균(土着根瘤菌)의 제(諸) 특성(特性) 연구(硏究) -I. 영남지역(嶺南地域) 토착(土着) 대두근류균(大豆根瘤菌)의 접종효과(接種效果)와 취락형태적(聚落形態的) 분포특성(分布特性))

  • Kang, Ui-Gum;Somasegaran, Padma;Jung, Yeun-Tae
    • Korean Journal of Soil Science and Fertilizer
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    • v.23 no.1
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    • pp.60-66
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    • 1990
  • Soybean [Glycin max (L.)] cv. Jangbaekkong was inoculated with 5 cultivated- and 5 uncultivated upland soils, in Yeongnam area, as soil inoculum and NifTAL peat inoculum as standard for soil inoculum potentials by Bradyrhizobium japonicum. 120 Bradyrhizobium japonicum isolates out of the soil populations were scored of three colony morphologies, designed "Dry", "Wet", and "Dry/Wet", and symbiotic effectiveness between "Dry" and "Wet" was compared. The results obtained were summarized as follows: 1. Indigenous populations of B. japonicum were above $10^4cells/g$. soil at the cultivated upland soils but were a few at the uncultivated upland soils except a colluvivum, orchard previously, in Yeongnam area. 2. Inoculum potentials of the cultivated upland soils were higher than the NifTAL inoculum and generally, nodule mass compensated nodule number for symbiotic effectiveness of soil populations. 3. Colony morphologies of soil populations showed the different proportions of "Dry" and "Wet" so that "Dry" types were dominant at the cultivated upland soils while "Wet" types at the uncultivated upland soils. 4. "Dry" colony morphology significantly exhibited higher symbiotic effectiveness than "Wet" types in nodule fresh weight, shoot dry weight, and shoot dry weight/nodule fresh weight. Therefore, as long as soil inoculum potentials, the growth of soybean at the cultivated upland soils could presumedly be affected by soil populations of Bradyrhizobium japonicum of "Dry" colony morphology.

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