• Title/Summary/Keyword: NB organisms

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Study on the Improvement of Soil for High Efficient and Sustainable Agriculture-II Changes of Population of Soil Microorganisms in the Fertilized Soil with Organic Materials (지속적 농업을 위한 고성능토양의 개발 연구-II 유기질비료 시용에 따른 토양미생물상의 변화)

  • Yoo, Sung-Joon;Chang, Ki-Woon;Whang, Kyung-Sook
    • Applied Biological Chemistry
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    • v.41 no.6
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    • pp.457-464
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    • 1998
  • For investigating the effect of amount of applied fertilizer with pig and chicken manures in the field, the number of soil bacteria were counted on the full strength conventional nutrient broth (NB) medium and its 100-fold dilution (DNB) medium. From the control soil samples without organic amendments, the number of bacteria on DNB medium was 5 to 10 times higher than that on NB medium. However, population density on NB medium was higher than on DNB medium from the treated soil with 60 and 120 Mg/㏊ for 3 years. Most of isolates from DNB plates did not grow on the NB plates. There were only grown on the 100-fold dilution medium, so it was called as DNB organisms. The DNB organisms were occupied as dominant group over 60% fo isolates in control soil. However, their occupation rates were rapidly decreased in the treatment soil with pig and chicken manures above 60 and 120 Mg per ha. These DNB organisms (oligotrophs) were significantly low population desities in the treatment soil with organic materials.

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Phylogenetic Analysis of Oligotrophic Bacteria Found in Potable Groundwater (음용 지하수중에 분포하는 저영양세균의 계통학적 해석)

  • ;Tomoyoshi Hashimoto
    • Korean Journal of Microbiology
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    • v.38 no.4
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    • pp.293-298
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    • 2002
  • In order to investigate the ecological aspect of bacteria on groundwater, water samples were collected from various regions. Total of 318 strains were isolated from diluted nutrient broth (DNB) agar medium, and investigated their growth pattern on nutrient broth (NB) medium. As a result, all the isolated strains were divided into two groups, NB and DNB organisms. Growth of DNB organisms were suppressed in full strength NB medium but not in DNB medium, which were called oligotrophic bacteria in this study. Proportion of DNB organisms occurred in the frequency of 50-98% in potable groundwaters (CW, CJ, DPG, CJG1), however, it was 23,46% in polluted site (TJ, NPG1). One hundred and two strains were identified as oligotrophic bacteria and their phylogenetic characteristics were determined by using 16S rDNA sequencing. Based on the phylogenetic analysis, they were found to fall into three major phylogenetic groups: belonging to the Proteobacteria $\alpha$-(49 strains), $\beta$-(50 strains), $\gamma$ -(3 strains) subdivisions. The phylogenetic analysis suggested that microbial diversity of potable groundwater is more complex than that obtained in the past investigation.

Estudy the Effect of Breast Cancer on Tlr2 Expression in Nb4 Cell

  • Amirfakhri, Siamak;Salimi, Arsalan;Fernandez, Nelson
    • Asian Pacific Journal of Cancer Prevention
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    • v.16 no.18
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    • pp.8445-8450
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    • 2016
  • Background: Breast cancer is the most common neoplasm in women and the most frequent cause of death in those between 35 and 55 years of age. All multicellular organisms have an innate immune system, whereas the adaptive or 'acquired' immune system is restricted to vertebrates. This study focused on the effect of conditioned medium isolated from cultured breast cancer cells on NB4 neutrophil-like cells. Materials and Methods: In the current study neutrophil-like NB4 cells were incubated with MCF-7 cell-conditioned medium. After 6 h incubation the intracellular receptor TLR2, was analyzed. Results: The results revealed that MCF-7 cell-conditioned medium elicited expression of TLR2 in NB4 cells. Conclusions: This treatment would result in the production of particular stimulants (i.e. soluble cytokines), eliciting the expression of immune system receptors. Furthermore, the flow cytometry results demonstrated that MCF-7 cell-conditioned medium elicited an effect on TLR2 intracellular receptors.

Role of RIN4 in Regulating PAMP-Triggered Immunity and Effector-Triggered Immunity: Current Status and Future Perspectives

  • Ray, Sujit Kumar;Macoy, Donah Mary;Kim, Woe-Yeon;Lee, Sang Yeol;Kim, Min Gab
    • Molecules and Cells
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    • v.42 no.7
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    • pp.503-511
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    • 2019
  • As sessile organisms, plants have developed sophisticated system to defend themselves against microbial attack. Since plants do not have specialized immune cells, all plant cells appear to have the innate ability to recognize pathogens and turn on an appropriate defense response. The plant innate immune system has two major branches: PAMPs (pathogen associated molecular patterns)-triggered immunity (PTI) and effector-triggered immunity (ETI). The ability to discriminate between self and non-self is a fundamental feature of living organisms, and it is a prerequisite for the activation of plant defenses specific to microbial infection. Arabidopsis cells express receptors that detect extracellular molecules or structures of the microbes, which are called collectively PAMPs and activate PTI. However, nucleotidebinding site leucine-rich repeats (NB-LRR) proteins mediated ETI is induced by direct or indirect recognition of effector molecules encoded by avr genes. In Arabidopsis, plasmamembrane localized multifunctional protein RIN4 (RPM1-interacting protein 4) plays important role in both PTI and ETI. Previous studies have suggested that RIN4 functions as a negative regulator of PTI. In addition, many different bacterial effector proteins modify RIN4 to destabilize plant immunity and several NB-LRR proteins, including RPM1 (resistance to Pseudomonas syringae pv. maculicola 1), RPS2 (resistance to P. syringae 2) guard RIN4. This review summarizes the current studies that have described signaling mechanism of RIN4 function, modification of RIN4 by bacterial effectors and different interacting partner of RIN4 in defense related pathway. In addition, the emerging role of the RIN4 in plant physiology and intercellular signaling as it presents in exosomes will be discussed.

ABSORBED INTERNAL DOSE CONVERSION COEFFICIENTS FOR DOMESTIC REFERENCE ANIMALS AND PLANT

  • Keum, Dong-Kwon;Jun, In;Lim, Kwang-Muk;Choi, Yong-Ho
    • Nuclear Engineering and Technology
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    • v.42 no.1
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    • pp.89-96
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    • 2010
  • This paper describes the methodology of calculating the internal dose conversion coefficient in order to assess the radiological impact on non-human species. This paper also presents the internal dose conversion coefficients of 25 radionuclides ($^3H,\;^7Be,\;^{14}C,\;^{40}K,\;^{51}Cr,\;^{54}Mn,\;^{59}Fe,\;^{58}Co,\;^{60}Co,\;^{65}Zn,\;^{90}Sr,\;^{95}Nb,\;^{99}Tc,\;^{106}Ru,\;^{129}I,\;^{131}I,\;^{136}Cs,\;^{137}Cs,\;^{140}Ba,\;^{140}La,\;^{144}Ce,\;^{238}U,\;^{239}Pu,\;^{240}Pu$) for domestic seven reference animals (roe deer, rat, frog, snake, Chinese minnow, bee, and earthworm) and one reference plant (pine tree). The uniform isotropic model was applied in order to calculate the internal dose conversion coefficients. The calculated internal dose conversion coefficient (${\mu}Gyd^{-1}$ per $Bqkg^{-1}$) ranged from $10^{-6}$ to $10^{-2}$ according to the type of radionuclides and organisms studied. It turns out that the internal does conversion coefficient was higher for alpha radionuclides, such as $^{238}U,\;^{239}Pu$, and $^{240}Pu$, and for large organisms, such as roe deer and pine tree. The internal dose conversion coefficients of $^{239}U,\;^{240}Pu,\;^{238}U,\;^{14}C,\;^3H$, and $^{99}Tc$ were independent of the organism.

Studies on Morphological, Physiological Characteristics for Oligotrophnic Bacteria from Forest Soil (삼림토양내(森林土壤內) 저영양세균(低營養細菌)의 형태(形態) 및 생리적특징(生理的特徵)에 관(關)한 연구(硏究))

  • Shin, Gawan Chull;Whang, Kyung Sook;Hattori, Tsutomu
    • Korean Journal of Agricultural Science
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    • v.16 no.2
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    • pp.152-162
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    • 1989
  • Oligotrophic bacteria studied in the present report were isolated on a 100-fold dilution of the nutrient broth(NB) medium and were able to grow on a 10,000-fold dilution of the NB medium. Oligotrophbic bacteria were shown to exist abundantly in all layers of a rendzina forest soil through the year. Two-hundred three oligotrophic bacteria were isolated from forest soil at different layers(L.F.H and A layers), and their morphological and physiological characteristics were examined. They were divided into 4 groups on their cell shape: (1) regular rods(Group I. 73 isolates), (2) curved/spiral rods (Group II, 29 isolates), (3) irregular rods (Group III, 56 isolateds), (4) append aged organisms (Group IV, 45 isolates), A high propoltion(95%)of the isolated oligotrophs were Gram-negative. all the isolated were aerobic, nonspore-formers. Forty isolates utilized fenolic acid such as ferulic acid or p-coumaric acid. sixty-for isolateds utilized C-1 compounds such as methanol or formic acid.

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