• 제목/요약/키워드: Mutation process

검색결과 216건 처리시간 0.021초

The oncogenic effects of p53-inducible gene 3 (PIG3) in colon cancer cells

  • Park, Seon-Joo;Kim, Hong Beum;Kim, Jeeho;Park, Sanggon;Kim, Seok Won;Lee, Jung-Hee
    • The Korean Journal of Physiology and Pharmacology
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    • 제21권2호
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    • pp.267-273
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    • 2017
  • The p53-inducible gene 3 (PIG3), initially identified as a gene downstream of p53, plays an important role in the apoptotic process triggered by p53-mediated reactive oxygen species (ROS) production. Recently, several studies have suggested that PIG3 may play a role in various types of cancer. However, the functional significance of PIG3 in cancer remains unclear. Here, we found that PIG3 was highly expressed in human colon cancer cell lines compared to normal colon-derived fibroblasts. Therefore, we attempted to elucidate the functional role of PIG3 in colon cancer. PIG3 overexpression increases the colony formation, migration and invasion ability of HCT116 colon cancer cells. Conversely, these tumorigenic abilities were significantly decreased in in vitro studies with PIG3 knockdown HCT116 cells. PIG3 knockdown also attenuated the growth of mouse xenograft tumors. These results demonstrate that PIG3 is associated with the tumorigenic potential of cancer cells, both in vitro and in vivo, and could play a key oncogenic role in colon cancer.

Bacillus subtilis subsp. krictiensis로부터 항진균물질 KRF-001의 생산을 위한 발효조건 및 돌연변이 연구 (Effect of Some Factors on the Production of an Antifungal Compound KRF-001 from Bacillus subtilis subsp. krictiensis)

  • 손광희;권혜경;복성해;이항우
    • 한국미생물·생명공학회지
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    • 제19권6호
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    • pp.614-618
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    • 1991
  • 토양세균 B.subtilis subsp. krictiensis로부터 항진균활성물질 KRF-001 복합체를 생산하기 위한 발효 조건을 조사하였다. Whey와 mannitol 등이 탄소원으로, CSL, corn gluten meal 그리고 polypeptone이 복합질소원으로 좋았다. 중온균인 생산균은 중성 pH조건에서 P.oryzae에 대한 bioactivity가 가장 높았으며, 0-10 DO의 낮은 용존산소 조건에서도 bioactivity가 유지되었다. 인산염의 농도가$ K_2HPO_4$, 0.047에서 0.097로 높아짐에 따라 1/2의 bioactivity 감소가 관찰되었다. 한편 UV 및 MNNG에 의한 돌연변이에 의해 우수균주 3개를 선별하였다.

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Machine Learning Perspective Gene Optimization for Efficient Induction Machine Design

  • Selvam, Ponmurugan Panneer;Narayanan, Rengarajan
    • Journal of Electrical Engineering and Technology
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    • 제13권3호
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    • pp.1202-1211
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    • 2018
  • In this paper, induction machine operation efficiency and torque is improved using Machine Learning based Gene Optimization (ML-GO) Technique is introduced. Optimized Genetic Algorithm (OGA) is used to select the optimal induction machine data. In OGA, selection, crossover and mutation process is carried out to find the optimal electrical machine data for induction machine design. Initially, many number of induction machine data are given as input for OGA. Then, fitness value is calculated for all induction machine data to find whether the criterion is satisfied or not through fitness function (i.e., objective function such as starting to full load torque ratio, rotor current, power factor and maximum flux density of stator and rotor teeth). When the criterion is not satisfied, annealed selection approach in OGA is used to move the selection criteria from exploration to exploitation to attain the optimal solution (i.e., efficient machine data). After the selection process, two point crossovers is carried out to select two crossover points within a chromosomes (i.e., design variables) and then swaps two parent's chromosomes for producing two new offspring. Finally, Adaptive Levy Mutation is used in OGA to select any value in random manner and gets mutated to obtain the optimal value. This process gets iterated till finding the optimal value for induction machine design. Experimental evaluation of ML-GO technique is carried out with performance metrics such as torque, rotor current, induction machine operation efficiency and rotor power factor compared to the state-of-the-art works.

Neurophysiology of Amplification and Mutation of Poetic Sense: Focusing on Hwang Jin-yi's Sijo "I do not untrustworthy"

  • Park, In-Kwa
    • International Journal of Advanced Culture Technology
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    • 제6권2호
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    • pp.100-106
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    • 2018
  • Sometimes, literary therapy is to create an abscission layer at the mind and remove the signifier of love, by the abscission layer. The purpose of this study is to reveal the mechanism of literary therapy by mutation in human-created sentences and to activate literary therapy. In Gosijo, the abscission layer of Seo Gyeongdok's mind is present in the layer of the "falling leaf" of the his Sijo's last sentence, and the abscission layer of Hwang Jin-yi's mind exists in the layer of the "falling leaf" of the her Sijo's last sentence. The "falling leaf" created by the abscission layer of Seo Gyeongdok's sentence acts as an action potential to the nervous system of Hwang Jin-yi. In Hwang Jin-yi's Sijo, the abscission layer is also activated, forming a "leaf". Hwang Jin-yi's Sijo constructs a new sensory layer that is extended and mutated more than the meaning of space between lines of Seo Gyeongdok's Sijo. In her Sijo, Hwang Jin-yi twists and twists Seo Gyeongdok's sentences to squeeze the sound. She accepts the Seo Gyeongdok's sentences and twists in the first sentence and twists out of the second sentence once more to produce the mutation in the last sentence. As a result of her sentence twist, Seo Kyung-duk's visual sense of "falling leaf" is mutated into a "falling leaf's sound" of auditory sense. This mutation process works as a healing mechanism in the human body. If this study will continue in the future, it will be possible to activate literary therapy by Sijo.

A New Approach to Solve the TSP using an Improved Genetic Algorithm

  • Gao, Qian;Cho, Young-Im;Xi, Su Mei
    • International Journal of Fuzzy Logic and Intelligent Systems
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    • 제11권4호
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    • pp.217-222
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    • 2011
  • Genetic algorithms are one of the most important methods used to solve the Traveling Salesman Problem. Therefore, many researchers have tried to improve the Genetic Algorithm by using different methods and operations in order to find the optimal solution within reasonable time. This paper intends to find a new approach that adopts an improved genetic algorithm to solve the Traveling Salesman Problem, and compare with the well known heuristic method, namely, Kohonen Self-Organizing Map by using different data sets of symmetric TSP from TSPLIB. In order to improve the search process for the optimal solution, the proposed approach consists of three strategies: two separate tour segments sets, the improved crossover operator, and the improved mutation operator. The two separate tour segments sets are construction heuristic which produces tour of the first generation with low cost. The improved crossover operator finds the candidate fine tour segments in parents and preserves them for descendants. The mutation operator is an operator which can optimize a chromosome with mutation successfully by altering the mutation probability dynamically. The two improved operators can be used to avoid the premature convergence. Simulation experiments are executed to investigate the quality of the solution and convergence speed by using a representative set of test problems taken from TSPLIB. The results of a comparison between the new approach using the improved genetic algorithm and the Kohonen Self-Organizing Map show that the new approach yields better results for problems up to 200 cities.

갑상선 수질암 조직에서 RET 원암유전자의 돌연변이 양상 (RET Proto-Oncogene Mutation in Medullary Thyroid Carcinoma)

  • 정웅윤;송현정;조남훈;박정수
    • 대한두경부종양학회지
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    • 제18권1호
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    • pp.3-10
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    • 2002
  • Background: The molecular pathogenesis of hereditary medullary thyroid carcinoma is well known to be associated with germ-line mutation in the RET proto-oncogene and sporadic medullary thyroid carcinoma has been shown to carry somatic RET mutation especially in exon 13 and 16. The aim of this study is to evaluate the genetic background in the pathogenesis of the sporadic medullary thyroid carcinoma which shows extremely high incidence in Korea. Materials and Methods: Direct DNA sequencing for RET exon 13 and 16, as well as immunohistochemistrical assay for a monoclonal RET antibody were performed from 20 cases of archival tissues of medullary thyroid carcinoma. Results: Monoclonal RET antibody with C-terminal epitope showed comparatively stronger expression in tumor cells than in normal tissues and immunoreactive area in the tumor was $66.0{\pm}40.1%$. Direct sequencing of RET exon 13 revealed 4 cases of mis-sense mutations in Codon 778, Codon 767, and both in Codon 768 and 778. One case showed a silent mutation (ACG-ACT) in RET exon 16 (Codon 926). Conclusions: The strong RET immunoreactivity of medullary thyroid carcinoma may suggest that there could be a genetic alteration in oncoprotein level. RET proto-oncogene mutation may be involved in the evolutional process of medullary thyroid carcinoma in the aspect of molecular basis.

유전자 알고리즘을 이용한 뮤테이션 테스팅의 테스트 데이터 자동 생성 (Automatic Test Data Generation for Mutation Testing Using Genetic Algorithms)

  • 정인상;창병모
    • 정보처리학회논문지D
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    • 제8D권1호
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    • pp.81-86
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    • 2001
  • 소프트웨어 테스팅의 중요 목표 중의 하나는 '좋은' 테스트 데이터 집합을 생성하는 것으로 이는 매우 어렵고 시간이 걸리는 작업이다. 본 논문은 소프트웨어 테스팅을 위한 자동 테스트 데이터 집합 생성에 유전자 알고리즘을 적용하는 방법을 제시하며 자동 테스트 데이터 생성에서 유전자 알고리즘의 효용성을 보이기 위해 유테이션 테스팅을 도입한다. 본 연구는 테스트 데이터 생성 과정이 테스트 대상 프로그램의 구현에 대한 지식을 필요로하지 않는다는 점에서 다른 방법들과 다르다. 또한, 제안된 방법의 효율성을 보이기 위하여 몇 가지 실험을 통해서 블랙박스 테스트 생성 기법은 랜덤 테스팅과 비교한다.

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Effect of His192 Mutation on the Activity of Alginate Lyase A1-III from Sphingomonas Species A1

  • Yoon, Hye-Jin;Choi, Yong-Jin;Osamu Miyake;Wataru Hashimoto;Kousaku Murata;Bunzo Mikami
    • Journal of Microbiology and Biotechnology
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    • 제11권1호
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    • pp.118-123
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    • 2001
  • The alginate lyase A1-III gene of Sphingomonas species A1 is composed of 1,077 nucleotides, encoding a protein (359 amino acids) with a molecular mass of 40,322 Da. Recombinant A1-III expressed in Escherichia coli exhibited the same full enzymatic activity as native A1-III. In order to identify the critical residue for activity, a site-directed mutation was introduced into the A1-III gene (H192A, His192->Ala). Recombinant A1-III (H192A) exhibited a significant decrease in enzyme activity (one-thirty thousandth of that of A1-III), without any conformational change, as detected by the CD spectra in the far UV region. Also, the chemical modification of wild-type A1-III with methyl 4-nitro benzene sulfonate resulted in a 40% decrease from the initial activity, whereas the same modification of A1-III (H192A) produced no change in the activity. The role of His192 on the catalytic process was also explored based on a model of A1-III docked with mannuronic acid into the active site.

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The Optimization of Truss Structures with Genetic Algorithms

  • Wu, Houxiao;Luan, Xiaodong;Mu, Zaigen
    • 한국공간구조학회논문집
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    • 제5권3호
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    • pp.117-122
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    • 2005
  • This paper investigated the optimum design of truss structures based on Genetic Algorithms (GA's). With GA's characteristic of running side by side, the overall optimization and feasible operation, the optimum design model of truss structures was established. Elite models were used to assure that the best units of the previous generation had access to the evolution of current generation. Using of non-uniformity mutation brought the obvious mutation at earlier stage and stable mutation in the later stage; this benefited the convergence of units to the best result. In addition, to avoid GA's drawback of converging to local optimization easily, by the limit value of each variable was changed respectively and the genetic operation was performed two times, so the program could work more efficiently and obtained more precise results. Finally, by simulating evolution process of nature biology of a kind self-organize, self-organize, artificial intelligence, this paper established continuous structural optimization model for ten bars cantilever truss, and obtained satisfactory result of optimum design. This paper further explained that structural optimization is practicable with GA's, and provided the theoretic basis for the GA's optimum design of structural engineering.

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7, 12-dimethylbenz[a]anthracene(DMBA)로 유발된 햄스터 협낭암에서 chlorophylln의 암예방효과에 관한 실험적 연구 (AN EXPERIMENTAL STUDY ON THE CHEMOPREVENTIVE EFFECT OF CHLOROPHYLLIN IN HAMSTER CHEEK POUCH TUMOR INDUCED BY 7, 12-DIMETHYLBENZ[A]ANTHRACENE)

  • 윤규호
    • Journal of the Korean Association of Oral and Maxillofacial Surgeons
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    • 제26권2호
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    • pp.137-145
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    • 2000
  • Carcinogenesis is a multi-stage process that generally consists of at least three steps; initiation, promotion, and progression. If one of these carcinogenic steps were suppressed or delayed, the cancer could be prevented. Cancer chemoprevention is defined to be inhibition or reversal of the carcinogenic process by the specific chemical agents and is a novel approach to cancer management alternative to conventional chemotherapy. Chlorophylln(CHL), a water-soluble derivative of chlorophyll, containing sodium and copper, has been known to be strong antimutagen in several test systems, but its mechanism of antimutagenic action is unknown. In the present experiment, the possibility of CHL as chemopreventive drugs on 7,12-dimethylbenz[a]anthracene(DMBA)-induced hamster buccal pouch carcinogenesis was investigated by mutagenicity test, carcinogenicity test, and frequency or spectrum of H-ras mutations in the both of DMBA-induced and chlorophylln-pretreated-DMBA induced tumor by polymerase chain reaction and non-isotopic restriction fragment length polymorphism. The treatment of CHL reduced the yields and multiplicity of the 0.5% DMBA-induced tumor, 86% to 62.5% and $3.7{\pm}0.6$ to $1.4{\pm}0.3$, respectively. The occurrence of histidine revertant by $20{\mu}mole$ DMBA was inhibited 25.6 to 81.7% by 1 to $5{\mu}M$ CHL in a dose-dependent manner. The mutation rates of H-ras gene in DMBA-induced and CHL-pretreated-DMBA induced tumor were 96%, 94% of which the most mutations were in codon 12/13. These results suggest that CHL inhibits the carcinogenic action of DMBA by the formation of complex between CHL and DMBA or the inhibition of the activation of DMBA in vivo. But CHL did not affect the mutation rates or its spectrum in already formed tumor.

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