• Korean Journal of Breeding Science
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• v.43 no.5
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• pp.399-404
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• 2011

Genetic diversity among 28 Cymbidium varieties was evaluated by using a sequence-related amplified polymorphism (SRAP) marker system. The SRAP marker which was based on the open reading frames (ORFs) regions was developed primarily for Brassica species, but has been applied to various crops. A total of 30 SRAP primer combinations were initially screened. Twenty-eight SRAP primer combinations showed high polymorphism among the 28 Cymbidium varieties, which were consisted of breeding varieties and their parents in National Institute of Horticultural & Herbal Science (NIHHS). The amplified DNA fragments were separated by denaturing acrylamide gels and detected silver staining method. One hundred ninety six polymorphic bands (7 per primer) were generated and ranged from 0.3 to 1.0 kb in size. Polymorphic fragments were scored for calculating simple matching coefficient of genetic similarity and cluster analysis with multi-variate statistical package (MVSP) 3.1. The mean genetic similarity coefficient value was 0.588. The results showed that the correlation between $F_1$ varieties and their parents was high. These studied SRAP markers will be useful tools for genotype identification, germplasm conservation, genetic relationships in Cymbidium.

• Journal of the Korean Society of Environmental Restoration Technology
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• v.25 no.3
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• pp.83-95
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• 2022

This study aims to present primary data for habitat restoration and artificial breeding conditions of L. unmunsana by identifying the habitat conditions and the larvae's food sources. In order to investigate the habitat characteristics of the adult L. unmunsana and land snails, which are the primary food sources for the larvae, field surveys were conducted on a total of 10 habitats in south-central parts of Korea including Sanseongcheon, Jeonju. The results revealed that the L. unmunsana habitat in the Sanseongcheon area had a broadleaf forest with a multi-layered vegetation structure, adjacent water features, and the north/northeast/northwest slopes with little effect of artificial lighting. The adult L. unmunsana in the Sanseongcheon area appeared from the end of May to the end of June, and was especially intensively observed around the middle of June. The most active time was from 23:30 to 00:30 with a temperature range of 19~22℃ and higher than 80% humidity. The peak count of the observed adults L. unmunsana was a total of 774 on June 11, 2021. In the case of land snails, 11 families and 23 species were observed in 10 habitats of L. unmunsana, and Euphaedusa fusaniana was the most extensive and the most observed in the five survey areas. The land snails of L. unmunsana habitats are mostly found under the organic layers of leaves and a fallen tree branch in broadleaf forests, where a thick organic material layer buffers temperature changes and provides high humidity for various snails. These habitat conditions are suitable for the larva of L. unmunsana and land snails to inhabit, feed, hide and hibernate.

• Journal of Microbiology and Biotechnology
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• v.32 no.6
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• pp.776-782
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• 2022

Corn-soybean meal diets are commonly used in the pork industry as a primary source of energy and protein. However, such a diet generally contains non-starch polysaccharides (NSPs) which present a challenge in finding ways to improve their availability and digestibility. Dietary multi-carbohydrases (MCs) have been proposed as an efficient approach to utilize NSPs, and can result in improved growth performance and host intestinal fitness. In this study, we evaluated the effects of MC in lactation diets on gut microbiota composition of lactating sows and their litters. The experimental design contained two dietary treatments, a diet based on corn-soybean meal (CON), and CON supplemented with 0.01% multigrain carbohydrases (MCs). Sow and piglet fecal samples were collected on days 7 and 28 after farrowing. Based on the results from 16S rRNA gene amplicon sequencing, MC led to changes in species diversity and altered the microbial compositions in lactating sows and their piglets. Specifically, the MC treatment induced an increase in the proportions of Lactobacillus in piglets. Clostridium and Spirochaetaceae showed a significantly reduced proportion in MC-treated sows at day 28. Our results support the beneficial effects of dietary carbohydrases and their link with improved production due to better host fitness outcomes and gut microbiota composition.

• Journal of the Korean Society of Environmental Restoration Technology
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• v.25 no.2
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• pp.69-84
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• 2022

The purpose of this research is to examine the user experience design that effectively exhibits botanical information through a virtual habitat built with 3D modeling and scanning data for the conservatory at Seoul Botanic Park. Seoul Botanic Park's conservatory contains environmental and ecological information on the wide spectrum of diverse plants under twelve cities all over the world. However, the exhibition method, which focuses on maps and information boards, has limitations in delivering diverse plant and habitat information to visitors. Virtual and augmented reality can be used as an effective tool for educating and experiencing the contents of various plant species as it can convey the ecological and environmental conditions of the habitat and local culture at diverse levels. This study experimented with constructing virtual habitats using the Unreal Engine and effectively communicating various botanical information through the interaction. With the introduction of a virtual habitat, we intend to enhance the user experience of park visitors and ultimately explore the possibility of using virtual and augmented reality to convey multi-layered environmental and ecological information of landscape.

• Korean Journal of Fisheries and Aquatic Sciences
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• v.54 no.6
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• pp.1023-1029
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• 2021

The Japanese common squid Todarodes pacificus is one of the fish species within the total allowable catch (TAC) system which requires further investigation. In this study, the acoustic survey method was used to analyze the distribution of the Japanese common squid Todarodes pacificus across all the seas of South Korea. The sea area within Korea was investigated using the research vessels 20, 21, and 22 of the National Institute of Fisheries Science. The acoustic surveys were carried out from July to September 2019 and February to May 2020. The acoustic systems used in the survey had frequencies of 38 kHz and 120 kHz (EK60, EK80, Simrad, Norway) of the split-beam scientific echosounder. The results showed that, in spring, 277 m²/nmi² was the highest in the east sea area, and the same in the summer season 880 m²/nmi² was the highest in the east sea area. In autumn, the highest nautical area scattering coefficient (NASC) value was observed in the coastal portion of the south sea, and in winter, the NASC values were generally low in all the sea area.

• Nuclear Engineering and Technology
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• v.54 no.12
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• pp.4636-4643
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• 2022

A time-of-flight and energy (TOF-E) detection system for the measurement of ²³⁶U accelerator mass spectrometry (AMS) has been developed to improve the ²³⁶U/²³⁸U sensitivity at Micro Analysis Laboratory, Tandem accelerator (MALT), The University of Tokyo. With observing TOF distribution of ²³⁵U, ²³⁶U and ²³⁸U, this TOF-E detection system has clearly separated ²³⁶U from the interference of ²³⁵U and ²³⁸U when measuring three kinds of uranium standards. In addition, we have developed a novel method combining kernel-based density estimation method and multi-Gaussian fitting method to estimate the ²³⁶U/²³⁸U sensitivity of the TOF-E detection system. Using this new estimation method, 3.4 × 10^-12 of ²³⁶U/²³⁸U sensitivity and 1.9 ns of time resolution are obtained. ²³⁶U/²³⁸U sensitivity of TOF-E detection system has improved two orders of magnitude better than that of previous gas ionization chamber. Moreover, unknown species other than uranium isotopes were also observed in the measurement of a surface soil sample, which has demonstrated that TOF-E detection system has a higher sensitivity in particle identification. With its high sensibility in mass determination, this TOF-E detection system could also be used in other heavy isotope AMS.

• Food Science of Animal Resources
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• v.42 no.2
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• pp.225-239
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• 2022

As commensal colonizers in livestock, there has been little attention on staphylococci, especially non-aureus staphylococci (NAS), contaminating meat production chain. To assess prevalence of staphylococci in retail pork and slaughterhouse carcass samples in Korea, we collected 578 samples from Korean slaughterhouses (n=311) and retail markets (n=267) for isolation of staphylococci and determined antimicrobial resistance phenotypes in all the isolates. The presence of and prevalence of fusB-family genes (fusB, fusC, fusD, and fusF) and mutations in fusA genes were examined in fusidic acid resistant isolates. A total of 47 staphylococcal isolates of 4 different species (Staphylococcus aureus, n=4; S. hyicus, n=1; S. epidermidis, n=10; Mammaliicoccus sciuri, n=32) were isolated. Fusidic acid resistance were confirmed in 9/10 S. epidermidis and all of the 32 M. sciuri (previously S. sciuri) isolates. Acquired fusidic acid resistance genes were detected in all the resistant strains; fusB and fusC in S. epidermidis and fusB/C in M. sciuri. Multi-locus sequence type analysis revealed that ST63 (n=10, 31%) and ST30 (n=8, 25%) genotypes were most prevalent among fusidic acid resistant M. sciuri isolates. In conclusion, the high prevalence of fusB-family genes in S. epidermidis and M. sciuri strains isolated from pork indicated that NAS might act as a reservoir for fusidic acid resistance gene transmissions in pork production chains.

• The Journal of the Acoustical Society of Korea
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• v.42 no.3
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• pp.262-269
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• 2023

In this paper, we propose a Linear Prediction (LP) analysis-based feature for detecting Snapping Shrimp (SS) Noise (SSN) in underwater acoustic data. SS is a species that creates high amplitude signals in shallow, warm waters, and its frequent and loud sound is a major source of noise. The proposed feature takes advantage of the characteristic of SSN, which is sudden and rapidly disappearing, by using LP analysis to detect the exact noise interval and reduce the effects of SSN. The error between the predicted and measured value is large and results in effective SSN detection. To further improve performance, a constant false alarm rate detector is incorporated into the proposed feature. Our evaluation shows that the proposed methods outperform the state-of-the-art MultiLayer-Wavelet Packet Decomposition (ML-WPD) in terms of receiver operating characteristic curve and Area Under the Curve (AUC), with the LP analysis-based feature achieving a higher AUC by 0.12 on average and lower computational complexity.

• Journal of Veterinary Science
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• v.25 no.3
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• pp.43.1-43.13
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• 2024

Importance: Haemaphysalis longicornis is an obligate blood-sucking ectoparasite that has gained attention due its role of transmitting medically and veterinary significant pathogens and it is the most common tick species in Republic of Korea. The preferred strategy for controlling ticks is a multi-antigenic vaccination. Testing the efficiency of a combination antigen is a promising method for creating a tick vaccine. Objective: The aim of the current research was to analyze the role of subolesin and enolase in feeding and reproduction of H. longicornis by gene silencing. Methods: In this study, we used RNA interference to silence salivary enolase and subolesin in H. longicornis. Unfed female ticks injected with double-stranded RNA targeting subolesin and enolase were attached and fed normally on the rabbit's ear. Real-time polymerase chain reaction was used to confirm the extent of knockdown. Results: Ticks in the subolesin or enolase dsRNA groups showed knockdown rates of 80% and 60% respectively. Ticks in the combination dsRNA (subolesin and enolase) group showed an 80% knockdown. Knockdown of subolesin and enolase resulted in significant depletion in feeding, blood engorgement weight, attachment rate, and egg laying. Silencing of both resulted in a significant (p < 0.05) reduction in tick engorgement, egg laying, egg hatching (15%), and reproduction. Conclusions and Relevance: Our results suggest that subolesin and enolase are an exciting target for future tick control strategies.

• Korean Journal of Environmental Biology
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• v.27 no.4
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• pp.341-352
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• 2009

This study was carried out to investigated community structure of macrobenthic assemblages around the Wolseong Nuclear Power Plant, East Sea of Korea and seasonal sampling was performed from October 2007 to July 2008. A total of 163 macrobenthic fauna were collected. The overall average macrobenthos density and biomass were 1,005 individuals $m^{-2}$ and $21.81\;gWWt\;m^{-2}$, respectively. Based on the LeBris (1988) index, there were 10 dominant species accounting for approximately 69.00% of total individuals. The major dominant species were the polychaetes Spiophanes bombyx (349 inds. $m^{-2}$), Mediomastus californiensis (82 inds. $m^{-2}$), Sigambra tentaculata (55 inds. $m^{-2}$), Magelona japonica (50 inds. $m^{-2}$), Scoletoma longifolia (33 inds. $m^{-2}$) and the Unidentified amphipod (Amphipoda spp., 72 inds. $m^{-2}$). The conventional multi-variate statistics (cluster analysis and non-metric multi-dimensional scaling) applied to assess spatial variation in macrobenthic assemblages. Cluster analysis and nMDS ordination analysis based on the Bray-Curtis similarity identified 2 major station groups. The major group 1 was associated with sand dominated stations and was characterized by high abundance of the bivalves Mactra chinensis, Siliqua pulchella and the polychaete Protodorvillea egena. On the other hand, major group 2 was connected with mud dominated stations and was numerically dominated by the polychaetes M. californiensis, M. japonica, Sternaspis scutata, S. longifolia and the bivalves Thyasira tokunagai and Theora fragilis. However, macrobenthic community structure were no significant differences between the environmental variables (sediment type and depth) and heated discharge.