• Title/Summary/Keyword: Micro-energy network

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cmicroRNA prediction using Bayesian network with biologically relevant feature set (생물학적으로 의미 있는 특질에 기반한 베이지안 네트웍을 이용한 microRNA의 예측)

  • Nam, Jin-Wu;Park, Jong-Sun;Zhang, Byoung-Tak
    • Proceedings of the Korean Information Science Society Conference
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    • 2006.10a
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    • pp.53-58
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    • 2006
  • MicroRNA (miRNA)는 약 22 nt의 작은 RNA 조각으로 이루어져 있으며 stem-loop 구조의 precursor 형태에서 최종적으로 만들어 진다. miRNA는 mRNA의 3‘UTR에 상보적으로 결합하여 유전자의 발현을 억제하거나 mRNA의 분해를 촉진한다. miRNA를 동정하기 위한 실험적인 방법은 조직 특이적인 발현, 적은 발현양 때문에 방법상 한계를 가지고 있다. 이러한 한계는 컴퓨터를 이용한 방법으로 어느 정도 해결될 수 있다. 하지만 miRNA의 서열상의 낮은 보존성은 homology를 기반으로 한 예측을 어렵게 한다. 또한 기계학습 방법인 support vector machine (SVM) 이나 naive bayes가 적용되었지만, 생물학적인 의미를 해석할 수 있는 generative model을 제시해 주지 못했다. 본 연구에서는 우수한 miRNA 예측을 보일 뿐만 아니라 학습된 모델로부터 생물학적인 지식을 얻을 수 있는 Bayesian network을 적용한다. 이를 위해서는 생물학적으로 의미 있는 특질들의 선택이 중요하다. 여기서는 position weighted matrix (PWM)과 Markov chain probability (MCP), Loop 크기, Bulge 수, spectrum, free energy profile 등을 특질로서 선택한 후 Information gain의 특질 선택법을 통해 예측에 기여도가 높은 특질 25개 와 27개를 최종적으로 선택하였다. 이로부터 Bayesian network을 학습한 후 miRNA의 예측 성능을 10 fold cross-validation으로 확인하였다. 그 결과 pre-/mature miRNA 각 각에 대한 예측 accuracy가 99.99% 100.00%를 보여, SVM이나 naive bayes 방법보다 높은 결과를 보였으며, 학습된 Bayesian network으로부터 이전 연구 결과와 일치하는 pre-miRNA 상의 의존관계를 분석할 수 있었다.

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SOI CMOS-Based Smart Gas Sensor System for Ubiquitous Sensor Networks

  • Maeng, Sung-Lyul;Guha, Prasanta;Udrea, Florin;Ali, Syed Z.;Santra, Sumita;Gardner, Julian;Park, Jong-Hyurk;Kim, Sang-Hyeob;Moon, Seung-Eon;Park, Kang-Ho;Kim, Jong-Dae;Choi, Young-Jin;Milne, William I.
    • ETRI Journal
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    • v.30 no.4
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    • pp.516-525
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    • 2008
  • This paper proposes a compact, energy-efficient, and smart gas sensor platform technology for ubiquitous sensor network (USN) applications. The compact design of the platform is realized by employing silicon-on-insulator (SOI) technology. The sensing element is fully integrated with SOI CMOS circuits for signal processing and communication. Also, the micro-hotplate operates at high temperatures with extremely low power consumption, which is important for USN applications. ZnO nanowires are synthesized onto the micro-hotplate by a simple hydrothermal process and are patterned by a lift-off to form the gas sensor. The sensor was operated at $200^{\circ}C$ and showed a good response to 100 ppb $NO_2$ gas.

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Adaptive k-means clustering for Flying Ad-hoc Networks

  • Raza, Ali;Khan, Muhammad Fahad;Maqsood, Muazzam;Haider, Bilal;Aadil, Farhan
    • KSII Transactions on Internet and Information Systems (TIIS)
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    • v.14 no.6
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    • pp.2670-2685
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    • 2020
  • Flying ad-hoc networks (FANETs) is a vibrant research area nowadays. This type of network ranges from various military and civilian applications. FANET is formed by micro and macro UAVs. Among many other problems, there are two main issues in FANET. Limited energy and high mobility of FANET nodes effect the flight time and routing directly. Clustering is a remedy to handle these types of problems. In this paper, an efficient clustering technique is proposed to handle routing and energy problems. Transmission range of FANET nodes is dynamically tuned accordingly as per their operational requirement. By optimizing the transmission range packet loss ratio (PLR) is minimized and link quality is improved which leads towards reduced energy consumption. To elect optimal cluster heads (CHs) based on their fitness we use k-means. Selection of optimal CHs reduce the routing overhead and improves energy consumption. Our proposed scheme outclasses the existing state-of-the-art techniques, ACO based CACONET and PSO based CLPSO, in terms of energy consumption and cluster building time.

Evaluation of Beach Pollution by Aquaculture Styrofoam Buoys in Tongyeong, Korea (양식장 스티로폼 부자쓰레기로 인한 통영 해변의 오염 평가)

  • Hong, Su Yeon;Lee, Chan Won;Hong, Sunwook;Lee, Jongmyoung;Jang, Yong Chang
    • Journal of the Korean Society for Marine Environment & Energy
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    • v.17 no.2
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    • pp.104-115
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    • 2014
  • Abundance and composition of marine debris on 13 beaches of Tongyeong City, South Korea were surveyed in 2013 Autumn. The average quantity of macro debris (>25 mm) was about 30 particle/$m^2$ and that of micro debris (1 mm-25 mm) was about 26,971 particle/$m^2$. This is a very high level compared with other areas of South Korea and the other countries. Among the 7 material types of debris (styrofoam, hard plastic, fiber, metal, glass, wood and others), styrofoam composed a large portion: 75% of macro debris and 98% of micro debris. And among the 'whole' styrofoam debris items whose original volume is remained more than 50%, styrofoam buoy debris composed 93%. This result suggests that the beaches surveyed are seriously contaminated by marine debris, and most of its sources are aquaculture styrofoam buoys. Management of styrofoam buoy debris used for oyster aquaculture in Tongyeong City is important not only for Tongyeong city, but also for other areas, because Tongyeong city hosts the biggest number of oyster aquaculture areas in South Korea.

A Study of Dynamic Viscoelastic Properties on Temperatures of Natural Rubber (천연고무의 온도에 따른 동적 점탄성 연구)

  • Lee, Bum-Chul;Yoo, Kil-Sang
    • Elastomers and Composites
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    • v.32 no.1
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    • pp.29-36
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    • 1997
  • The change of elastic modulus(E'), loss modulus(E"), and loss $tangent(tan{\delta})$ were investigated on condition of double strain amplitude (DSA) at temperature of $-40{\sim}80^{\circ}C$ for carbon black filled natural rubber. E', E", and $tan{\delta}$ were increased as it closed to the glass transition temperature due to decrease of rubber network flexibility and carbon black agglomerate interaction. In the micro strain range, energy loss showed maximum value because of the chain slippage in rubber matrix, but the regeneration of carbon black agglomerate and rubber matrix affected decrease of energy loss over the mid-range strain. As a results of regression analysis, $E'\;_{max}$ correlation with ${\Delta}E'$ $(E'\;_{0.4%DSA}-E'\;_{2.0%DSA})$ showed linear relationship.

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An Analysis of Pore Network of Drilling Core from Pohang Basin for Geological Storage of CO2 (이산화탄소 지중저장을 위한 포항분지 시추코어의 공극구조 분석)

  • Park, Jihwan;Park, Hyeong-Dong
    • Tunnel and Underground Space
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    • v.26 no.3
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    • pp.181-191
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    • 2016
  • In geological storage of $CO_2$, the behavior of $CO_2$ is influenced by pore network of rock. In this study, the drilling cores from Pohang Basin were analyzed quantitatively using three-dimensional images acquired by X-ray micro computed tomography. The porosities of sandstone specimens around 740 m-depth (T1), 780 m-depth (T2) and 810 m-depth (T3) which were target strata were 25.22%, 23.97%, 6.28%, respectively. Equivalent diameter, volume, area, local thickness of pores inside the sandstone specimens were analyzed. As a result, the microstructural properties of T1 and T2 specimens were more suitable for geological storage of $CO_2$ than those of T3 specimens. The result of the study can be used as input data of the site for decision of injection condition, flow simulation and so on.

An Energy Efficient Routing Scheme for Cluster-based WSNs (클러스터 기반 WSN에서 에너지 효율적인 라우팅 기법)

  • Song, Chang-Young;Kim, Seong-Ihl;Won, Young-Jin;Chung, Yong-Jin
    • 전자공학회논문지 IE
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    • v.47 no.3
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    • pp.41-46
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    • 2010
  • WSN, or Wireless Sensor Network, consists of a multitude of inexpensive micro-sensors. Because the batteries in sensor nodes can not be replaced once they are deployed, the life of a WSN is absolutely determined by the batteries. So, energy efficiency of a network is a critical factor for long-life operation. LEACH protocol which divides WSN into two groups is a typical routing protocol based on the clustering scheme for the efficient use of limited energy. It is composed of round units which are separated into set-up and steady state. In this paper we propose a power saving scheme to minimize set-up phase itself and to involve a data comparison algorithm. We evaluate the performance of the proposed scheme in comparison with original LEACH protocol. Simulation results validate our scheme has better performance in terms of the number of alive nodes as time evolves and average energy dissipated.

Performance Analysis of Coded FSK System for Multi-hop Wireless Sensor Networks (멀티 홉 무선 센서 네트워크를 위한 부호화된 FSK 시스템의 성능 해석)

  • Oh, Kyu-Tae;Roh, Jae-Sung
    • Journal of Advanced Navigation Technology
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    • v.11 no.4
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    • pp.408-414
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    • 2007
  • Research advances in the areas of micro-sensor device and wireless network technology, has made it possible to develop energy efficient and low cost wireless sensor nodes. In this paper, the forward error control (FEC) scheme for lower power consumption and excellent BER(Bit Error Rate) performance during transmission propose in multi-hop wireless sensor network based on FSK modem. The FEC technique uses extra processing power related to encoding and decoding, it is need complex functions to be built into the sensor node. The probability of receiving a correct bit and codeword for relaying a frame over h nodes to the sink node is calculated as a function of channel parameter, number of hops, number of bits transmitted and the distance between the different nodes.

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GEOP : A Security Aware Multipath Routing Protocol (GEOP : 보안 인식 다중경로 라우팅 프로토콜)

  • Kong, Hyung-Yun
    • The Journal of the Institute of Internet, Broadcasting and Communication
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    • v.10 no.2
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    • pp.151-157
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    • 2010
  • Rapid technological advances in the area of micro electro-mechanical systems (MEMS) have spurred the development of small inexpensive sensors capable of intelligent sensing. A significant amount of research has been done in the area of connecting large numbers of these sensors to create robust and scalable Wireless Sensor Networks (WSNs). The resource scarcity, ad-hoc deployment, and immense scale of WSNs make secure communication a particularly challenging problem. Since the primary consideration for sensor networks is energy efficiency, security schemes must balance their security features against the communication and computational overhead required to implement them. In this paper, we combine location information and probability to create a new security aware multipath geographic routing protocol. The implemented result in network simulator (ns-2) showed that our protocol has a better performance under attacks.

EBCO - Efficient Boundary Detection and Tracking Continuous Objects in WSNs

  • Chauhdary, Sajjad Hussain;Lee, Jeongjoon;Shah, Sayed Chhattan;Park, Myong-Soon
    • KSII Transactions on Internet and Information Systems (TIIS)
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    • v.6 no.11
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    • pp.2901-2919
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    • 2012
  • Recent research in MEMS (Micro-Electro-Mechanical Systems) and wireless communication has enabled tracking of continuous objects, including fires, nuclear explosions and bio-chemical material diffusions. This paper proposes an energy-efficient scheme that detects and tracks different dynamic shapes of a continuous object (i.e., the inner and outer boundaries of a continuous object). EBCO (Efficient Boundary detection and tracking of Continuous Objects in WSNs) exploits the sensing capabilities of sensor nodes by automatically adjusting the sensing range to be either a boundary sensor node or not, instead of communicating to its neighboring sensor nodes because radio communication consumes more energy than adjusting the sensing range. The proposed scheme not only increases the tracking accuracy by choosing the bordering boundary sensor nodes on the phenomenon edge, but it also minimizes the power consumption by having little communication among sensor nodes. The simulation result shows that our proposed scheme minimizes the energy consumption and achieves more precise tracking results than existing approaches.