• Title/Summary/Keyword: MAR

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MarSel : The LD-based Marker Selection System for the Large-scale Datasets (MarSel : Large-scale Dataset에 대한 LD기반의 Marker 선택 시스템)

  • 김상준;여상수;김성권
    • Proceedings of the Korean Information Science Society Conference
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    • 2004.10b
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    • pp.253-255
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    • 2004
  • 인간(human)에게 나타나는 다양성(variation)은 인체의 유전체(genome) 안에서 발생된 SNP(Single Nucleotide Polymorphism)에 의해 나타난다고 알려져 있다. 유전체내의 SNP과 다양성에 대한 연관 연구(Associate study)를 할 때에 약 30여 억 개로 추정되는 염기서열(DNA sequence)물 모두 분석한다면 많은 비용과 시간을 필요로 할 것이다. 이런 비용과 시간을 줄이기 위친 적은 수의 대표 SNP(=tagSNP)을 찾는 연구가 현재 진행 중이다. 우리는 LD계수|D;|을 block 분할에 이용하여 생물학적인 의미를 부여한 후, 전산적인 최적해를 찾는 접근을 이용했다. 또한, 기존 연구에서는 large-scale data에 대한 처리가 불가능해서 chromosome의 일부분의 데이터에 대해서안 분석이 시도되었다. 더욱 광범위한 분석을 위해서 chromosome 단위의 처리가 필요하다. 우리는 chromosome단위의 SNP data를 한 번에 처리가 가능한 시스템인 MarSel를 구현하였다

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Influence of PE Film House culture with Non Heating on Growth and Yield of Forage Rape (무가온 Vinyl House 재배가 사초유채의 생산특성과 수량에 미치는 영향)

  • 안계수;권병선;정동희;김상곤
    • Journal of The Korean Society of Grassland and Forage Science
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    • v.16 no.3
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    • pp.215-218
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    • 1996
  • This study examines the possibility of early production of forage rape (cv. Akela and Velox) in the period of wintering. Bolting date was Feb. 2 to Feb. 9 in PE film house culture by non-heating and Mar. 3 to Mar. 12 in open field culture. And flowering date was Feb. 24 to Mar. 3 in PE film house culture by non-heating, so it was 30~50 days faster than the open field culture of Apr. 17 to Apr. 22. Fresh matter yield was 8, 356~4, 887 kg/10a in PE film house culture by non-heating, so it was 1, 431~1, 603 kg/10a yield increase than in the open field culture of 7, 253~7, 456 kg/10a Dry matter yield was 953~963 kg/10a in PE film house culture by non-heating, so it was 71~284 kg/10a yield increase than in the open field culture of 669~892 kg/10a.

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Microbiological Evaluation of Antibiotic Resistance and Pathgoenicity in Autothermal Thermophilic Aerobic Digestion Treated Swine Manure

  • Han Il;Congeevaram Shankar;Gi Dong-Won;Park Jun-Hong
    • Proceedings of the Korean Society of Soil and Groundwater Environment Conference
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    • 2006.04a
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    • pp.119-122
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    • 2006
  • In both untreated and conventionally stabilized swine manures antibiotic resistant (AR) microorganisms, Staphylococcus-like and Salmonella-like microorganisms were detected. Also pathogens with MAR phynotype were detected. Presence of such microorganisms suggest high level of pathogen-related health risk to farmers who may be in direct contact with the manure and its conventionally stabilized product In contrast the autothermal thermophilic aerobic digestion (ATAD) treatment have efficiently reduced AR and pathogenicity from the swine manure. When soil was fertilized using swine manure and its stabilized products, despite no detection of MAR-exhibiting pathogen-like microorganisms in fertilized soil, potential pathogen-related health risk could not be ruled out from the fertilized soil since the organic fertilization led to increase in AR and pathogenicity in the soil microbial communities. As conclusion, this microbiological study demonstrated that an ATAD process is applicable in control of pathogen-related health risk in livestock manure.

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Effect of Planting Date and Plant Density on Yield and Quality of Industrial Rapeseed in Spring Sowing

  • Kwon, Byung-Sun;Jung, Dong-Soo
    • Plant Resources
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    • v.8 no.2
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    • pp.91-95
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    • 2005
  • In spring, to determine the optimal planting date and plant density of rapeseed in southern areas of Korea. $Taiwan^{\#1}$ variety for spring sowing, the highest yielding variety was grown under five different planting date and plant density. Yield components such as plant height, ear length, number of seedling stand per $m^2$, number of per ear and seed set percentage were highest at the plots with Mar. 5 of planting date and 50/20cm drilling of plant density. Yield of seed, oil, gas and 1,000 grains weight and erucic acid content were highest at the Mar. 5 of planting date and 50/20cm drilling of plant density. Judging from the results reported above, at optimum planting date and plant density of rapeseed seemed too be Mar. 5 of planting date and 50/20cm plant density in spring sowing.

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Magnitude of beam-hardening artifacts produced by gutta-percha and metal posts on cone-beam computed tomography with varying tube current

  • Gaeta-Araujo, Hugo;Nascimento, Eduarda Helena Leandro;Fontenele, Rocharles Cavalcante;Mancini, Arthur Xavier Maseti;Freitas, Deborah Queiroz;Oliveira-Santos, Christiano
    • Imaging Science in Dentistry
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    • v.50 no.1
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    • pp.1-7
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    • 2020
  • Purpose: This study was performed to evaluate the magnitude of artifacts produced by gutta-percha and metal posts on cone-beam computed tomography (CBCT) scans obtained with different tube currents and with or without metal artifact reduction (MAR). Materials and Methods: A tooth was inserted in a dry human mandible socket, and CBCT scans were acquired after root canal instrumentation, root canal filling, and metal post placement with various tube currents with and without MAR activation. The artifact magnitude was assessed by the standard deviation (SD) of gray values and the contrast-to-noise ratio (CNR) at the various distances from the tooth. Data were compared using multi-way analysis of variance. Results: At all distances, a current of 4 mA was associated with a higher SD and a lower CNR than 8 mA or 10 mA (P<0.05). For the metal posts without MAR, the artifact magnitude as assessed by SD was greatest at 1.5 cm or less (P<0.05). When MAR was applied, SD values for distances 1.5 cm or closer to the tooth were reduced (P<0.05). MAR usage did not influence the magnitude of artifacts in the control and gutta-percha groups(P>0.05). Conclusion: Increasing the tube current from 4 mA to 8 mA may reduce the magnitude of artifacts from metal posts. The magnitude of artifacts arising from metal posts was significantly higher at distances of 1.5 cm or less than at greater distances. MAR usage improved image quality near the metal post, but had no significant influence farther than 1.5 cm from the tooth.

Nutritional Factors Related to Bone Mineral Density in the Different Age Groups of Korean Women (한국 여자의 연령별 골밀도에 영향을 미치는 영양요인 분석)

  • 유춘희;이정숙;이일하;김선희;이상선;정인경
    • Journal of Nutrition and Health
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    • v.35 no.7
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    • pp.779-790
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    • 2002
  • Nutritional factors affecting bone mineral density (BMD) in the different age groups of Korean women were investigated to obtain baseline data for maintaining bone health. Information on diet and anthropometry were collected in 80 elementary school children (height 127.2 cm, weight 27.3 kg), 84 high school students (height 161.6 cm, weight 52.4 kg), 100 adults aged 25 to 35 years (height 159.4 cm, weight 52.7 kg) and 120 elderly people over 60 years of age (height 150.9 cm, weight 55.6 kg). Data for nutrient intake were obtained by 24-hour recall method. BMDs of lumbar spine (L$_2$-L$_4$) and femoral neck were measured by dual energy x-ray absorptiometry. The relationship between BMD of femoral neck and nutritional factors were analyzed. The average BMD of femoral neck for females was 0.61 g/$\textrm{cm}^2$ in children, 0.88 g/$\textrm{cm}^2$ in adolescents, 0.90 g/$\textrm{cm}^2$ in adults, 0.64 g/$\textrm{cm}^2$ in elderly people. Among the adult subjects, 11.0% was classified as osteopenia in the femoral neck. For the elderly, the prevalence of osteopenia and osteoporosis were 34.2% and 47.5% of the subjects. It was shown the intake of energy, protein, plant protein, animal protein, fat, carbohydrate, Ca, P, Fe, vitamin A, thiamin, riboflavin, niacin, vitamin C, carbohydrate energy percent and fat energy percent influenced bone health status in all age groups. In the MAR on bone health status, children, adult and elderly subjects were significantly different among groups classified by bone health status and the MAR of the groups with good in bone health was higher. The RDA percent of each nutrient was influence factor on BMD. Nutrient intake of energy, protein, P, Fe, thiamin, niacin were lower BMD on below 75% of Korean RDA. Stepwise multiple regression analysis revealed that several dietary factors were influence on BMD. MAR on femoral neck BMD of children and elderly subjects was the highest influence factor. Beyond this, the most influential dietary factors on BMD were the vitamin A, total Ca and vegetable Ca. The above results have confirmed that dietary factors influence BMD in various age groups. Energy, protein, Ca, P, Fe, thiamin, riboflavin, niacin, vitamin C as well as MAR were important dietary factors influencing BMD. The results of this study revealed that people who received sufficient nutrients intake showed healthy bone status. The MAR mainly influenced the bone health status.

A Study on Improvement of Image Quality Decrease due to Tooth Restoration in Facial CT (안면부 CT 검사 시 치아 충전물에 의한 화질 저하 개선 방안에 관한 연구)

  • Kim, Hyeon ju;Yoon, Joon
    • Journal of the Korean Society of Radiology
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    • v.12 no.4
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    • pp.497-503
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    • 2018
  • The purpose of this study was to investigate the degree of image degradation and the improvement of image quality caused by the density difference between the orthodontic filling material and the surrounding anatomical structure during the examination of the facial CT by quantitative and qualitative analysis. The teeth were scanned using 64-MDCT (Discovery 750 HD, GE HEALTH CARE, Milwaukee, USA). The teeth were scanned and compared according to tube voltage, silicone application, and MAR application. As a result, 10.36% CT value decreased at 140 kVp and 5.81% decrease at the application of silicon material. As a result of the qualitative evaluation, it was evaluated that 7 of the 10 observers and 3 of the acceptors were applied to the MAR algorithm. Therefore, it is possible to reduce the unnecessary burden on the radiation exposure dose as well as to reduce the loss of image data by reducing the high density artifacts, as well as the inspection parameters used in the current clinical application and various algorithms that can reduce the high density artifacts. It can be expected to provide a lot of image information.

The Analysis of CT Number Rate of Change of Applying The Iterative Metallic Artifact Reduction Algorithm for CT Reconstruction Image (Iterative Metallic Artifact Reduction 알고리즘 적용 CT 재구성영상의 CT Number 변화율 분석)

  • Kim, Hyeonju;Yoon, Joon
    • Journal of the Korea Academia-Industrial cooperation Society
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    • v.18 no.7
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    • pp.84-91
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    • 2017
  • This study was performed using Somatom Definition Flash (Siemens, Enlarge, Germany) and GE 64-MDCT (Discovery 750 HD, GE HEALTHCARE, Milwaukee, USA.) using high-density medical materials that (are indispensable to?) computed tomography. We analyzed quantitatively the rate of change of the CT number of the CT reconstruction images by means of the IMAR and MAR algorithms using the phantom images acquired after scanning and previously captured raw data images. As a result, it was shown that the IMAR and MAR algorithms provided if ferent phantom images in the case of all medical high-density materials (p <0.05). The black streak artifacts were analyzed using the MAR and IMAR algorithms to determine if they corresponded to stainless steel materials (p>0.05). Also, it was found that the application of the IMAR algorithm affects the attenuation deviation, because there is a change in the image CT number compared to that before. The results suggest that, in the future, after the implant procedure, it would be useful to observe the surgical site and surrounding tissues during follow-up CT scans.

Estimation of Spectral Distribution of Illumination Using Maximum Achromatic Region (최대 무채색 영역을 이용한 광원의 분광분포 추정)

  • Kim, Hui-Su;Kim, Yun-Tae;Lee, Cheol-Hui;Ha, Yeong-Ho
    • Journal of the Institute of Electronics Engineers of Korea SP
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    • v.38 no.4
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    • pp.392-400
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    • 2001
  • This paper proposes an illuminant estimation algorithm that estimates the spectral power distribution of an incident light source from a single image. The proposed illumination recovery procedure has two phases. First, the surface spectral reflectances are recovered in the maximum achromatic region (MAR) which is the most achromatic and highly bright region of an image after removing partially the effect of illumination using a modified gray world algorithm. Here, the surface reflectances of MAR are estimated using the principal component analysis method along with a set of given 1269 Munsell samples. Second, the Population of reflected lights is determined with 1269 Munsell samples and a set of illuminations then the spectral distribution of re(looted lights of MAR is selected from the spectral database. That is, color differences are compared between the reflected lights of the MAR and the spectral database, which is the set of reflected lights built by the given set of Munsell samples and illuminants. Then the closest colors from the spectral database are selected. Finally, the illuminant of an image can be calculated dividing the average spectral distributions of reflected lights of MAR by the average surface reflectances of the MAR. In order to evaluate the proposed algorithm, experiments with artificial scenes, which are exposed to chromatic illuminants, were performed and the spectral distribution of estimated illumination and color difference are compared with results of the conventional method.

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A Survey on Stages of Dietary Behavior Change and Nutrient Intake Status of Old People in Islands Areas According to Depression Degree (도서(섬)지역 노인의 우울정도에 따른 식행동단계와 영양소 섭취상태 조사)

  • Park, Pil-Sook;Park, Kyung-Ok;Jeong, Gu-Beom;Chun, Byung-Yeol;Choi, Mi-Wha;Park, Mi-Yeon
    • Korean Journal of Human Ecology
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    • v.18 no.6
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    • pp.1349-1361
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    • 2009
  • The present study was designed to analyze the relationship of dietary behavior change and nutrient intake status owing to a depression degree for 143 people over 65 years old living in Echeong and Hansan islands area, South Korea. The depression degree was classified into non depression, minor depression and depressive disorder groups using. The Center for Epidemiological Studies-Depression (CES-D) scale for 143 subjects. The results are as follows; the depression degree significantly made differences according to sex (p<.001), marital status (p<.05), self-related economic status (p<.001) and living expenses (p<.05). The stage of dietary behavior according to the depression degree was as follows; the non depression group was 57.6%, the minor group was 46.8% and the depressive disorder group was 27.1% of the subjects. The intake frequency of the cereal group (p<.05) and fruit group (p<.01) was significantly different among food group intake status owing to the depression degree. Mean adequacy ratio(MAR)[13], MAR[10], and MAR[4] of the depressive disorder group were significantly lower than that of the non depression and minor depression groups. Each average of MAR[13], MAR[10], and MAR[4] for the subjects were $0.68{\pm}0.2$, $0.67{\pm}0.2$, and $0.55{\pm}0.2$. Concerned about the nutrients over 1.0 index of nutritional quality(INQ) 8 nutrients of protein, Phosphorous, iron, zinc, vitamin A, vitamin $B_6$, niacin and vitamin C belonged to the non depression group. Additionally, 6 nutrients of protein, Phosphorous, iron, zinc, vitamin $B_6$ and niacin were included for minor depression and depressive disorder groups.