• Title/Summary/Keyword: M-cluster

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Fast Heuristic Algorithm for Similarity of Trajectories Using Discrete Fréchet Distance Measure (이산 프레셰 거리 척도를 이용한 궤적 유사도 고속계산 휴리스틱 알고리즘)

  • Park, Jinkwan;Kim, Taeyong;Park, Bokuk;Cho, Hwan-Gue
    • KIISE Transactions on Computing Practices
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    • v.22 no.4
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    • pp.189-194
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    • 2016
  • A trajectory is the motion path of a moving object. The advances in IT have made it possible to collect an immeasurable amount of various type of trajectory data from a moving object using location detection devices like GPS. The trajectories of moving objects are widely used in many different fields of research, including the geographic information system (GIS) field. In the GIS field, several attempts have been made to automatically generate digital maps of roads by using the vehicle trajectory data. To achieve this goal, the method to cluster the trajectories on the same road is needed. Usually, the $Fr{\acute{e}}chet$ distance measure is used to calculate the distance between a pair of trajectories. However, the $Fr{\acute{e}}chet$ distance measure requires prolonged calculation time for a large amount of trajectories. In this paper, we presented a fast heuristic algorithm to distinguish whether the trajectories are in close distance or not using the discrete $Fr{\acute{e}}chet$ distance measure. This algorithm trades the accuracy of the resulting distance with decreased calculation time. By experiments, we showed that the algorithm could distinguish between the trajectory within 10 meters and the distant trajectory with 95% accuracy and, at worst, 65% of calculation reduction, as compared with the discrete $Fr{\acute{e}}chet$ distance.

Change in Fish Assemblage Inhabiting Around Dae Island in Gwangyang Bay, Korea (광양만 대도 주변에 서식하는 어류군집의 변화)

  • Kwak, Seok-Nam;Huh, Sung-Hoi;Kim, Ha-Won
    • Journal of the Korean Society of Marine Environment & Safety
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    • v.18 no.3
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    • pp.175-184
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    • 2012
  • Changes of fish assemblage inhabiting around Dae Island in Gwangyang Bay, Korea were investigated using a small beam trawl monthly from March 2009 to February 2010. These data were compared with those obtained in previous studies(1990~1991 and 1995~1996) at our study sites. A total of 8,133 fish belonging to 74 species in 38 families were collected. Leiognathus nuchalis, Argyrosomus argentatus, Acentrogobius pellidebilis, Sillago japonica, Apogon lineatus, Thryssa hamiltoni, Repomucenus richardsonii, Pholis nebulosa, Pleuronichthys cornutus, Hexagrammos otakii, and Limanda yokohamae dominated, and these were responsible for 89.5% and 58.9% in the number of individuals and in biomass, respectively. These were primarily small species or early juveniles of larger species. Seasonal variation in both species composition and abundance was large: the peak number of fish species occurred in May and October 2009, whilst both number of individuals and biomass were the highest in May 2009. Fish numbers as well as biomass was lowest in January and February 2010. Seasonal changes in the abundance of fishes corresponded with temperature. Compared with the previous studies, the total number of individuals and biomass per unit area($m^2$) were higher, and the predominance of L. nuchalis occurred while abundances of Liparis tanakai were significant decreased. These results seemed to be change of species composition in fish assemblage which was due to variation of annual environmental characteristics in Gwangyang Bay.

An ecological study on subtidal macrobenthos inside and outside of Saemangeum dike (새만금 방조제 내측과 외측 조하대 대형저서동물의 생태학적 연구)

  • Kim, Jong-Chun;Ma, Che-Woo;Bok, Young-Wook
    • Korean Journal of Environment and Ecology
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    • v.28 no.4
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    • pp.442-449
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    • 2014
  • This study was carried out to measure the seasonal changes in community structure and species composition of marobenthos on the subtidal area of Saemangeum regions. The macrobenthos comprised 64 species were during this study, predominately annelids (53.0%), arthropods (18.8%), mollusks (18.8%) and 9.4% were from other species. Total abundance was 24,885 individuals, comprising 19,805 individuals of annelids (79.6%), 4,620 individuals of mollusks (18.5%), 295 individuals of other species (1.2%), and 165 individuals of arthropods (0.7%). After analyzing the bray-curtis similarity, had two large groups (A, B) the inside and outside of Saemangeum dike. They all matched the nMDS analysis. I evaluated the benthic community health using BPI (Benthic pollution Index). There are no significant differences between the station position and the inside or outside of Saemangeum dike. But, highest BPI level was in March.

Development of a Nutriculture System for Fruit Vegetables Using Perlite and Its Mixtures with Other Substrates II. Effects of Substrates on the Growth and Fruit Quality of Hydroponically Grown Tomato (Perlite 단용 및 혼용처리를 이용한 과채류 양액재배 기술 개발 II. 배지의 종류가 양액재배 토마토의 생장과 과실품질에 미치는 영향)

  • 정순주;서범석;이범선;이정현
    • Journal of Bio-Environment Control
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    • v.5 no.1
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    • pp.7-14
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    • 1996
  • This experiment was carried out to investigate the growth and yield responses of hydroponically grown tomato as affected by the different substrates using perlite and mixtures with perlite. Substrates used in this experiment were perlite (fine and coarse granule), peatmoss, rice hull and carbonized rice hull. The results obtained were as follows ; The best results in terms of total fruit yield and average fruit weight obtained in the single treatment of perlite, followed by perlite mixture with rice hull and carbonized rice hull. Leaf area was also higher in the plots of perlite mixture and optimum mixing ratio of perlite, peatmoss and carbonized rice hull was determined as 5:3:2 by volume. The more the rice hull was added to the mixed substrates, the less in fruit production was observed. However, adding perlite to other substrates brought higher fruit yield. Single treatment of rice hull showed the lowest fruit yield but enhanced in soluble solids contents over 6.0 $^{\circ}$Brix at each cluster.

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Effects of Bioceramic Powder in the Nutrient Solution and Foliar Spray on the Growth and Fruit Quality of Aeroponically Grown Tomato (바이오세라믹 분말의 엽면살포와 배양액내 처리가 분무경재배 토마토의 생장과 과실품질에 미치는 영향)

  • 이정현;이범선;정순주
    • Journal of Bio-Environment Control
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    • v.5 no.1
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    • pp.50-56
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    • 1996
  • This experiment was carried out to investigate the effects of new material, bioceramic powder in the nutrient solution(0.02%) and foliar spray(0.2%) on the growth and fruit quality of aeroponically grown tomato(Lycopersicon esculentum MILL. cv. Seokwang). Plant height was lowered, but root growth was increased both treatment of bioceramic powder into the nutrient solution and foliar spray. Cluster growth of tomato plants increased up to 14% over than that of control in the plot of foliar spray with bioceramic powder. Total plant dry weight also increased when bioceramic powder was treated both into the nutrient solution and foliar spray. T/R ratio was reduced by the treatment of bioceramic powder, but NAR and RGR showed the highest in the plot of foliar spray treated with 0.2% bioceramic powder than that of the other plots. Cumulative fruit fresh and dry weight were reduced when bioceramic powder was treated into nutrient solution but foliar spray produced more cumulative fruit fresh and dry weight than that of control. It was shown that treatment of bioceramic powder into the nutrient solution and foliar spray could be improved sugar degree without reducing fruit yields.

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Spatial Variation in Macrobenthic Communities Affected by the Thermal Discharge Volumes of a Nuclear Power Plant on the East Coast of Korea (원자력 발전소의 온배수 배출량 변화에 따른 대형저서동물 군집의 공간 변화)

  • Yu, Ok Hwan;Lee, Hyung-Gon;Lee, Jae-Hac;Kim, Kyung-Tae;Myung, Cheol-Soo;Moon, Hyung Tae;Byun, Ju Young
    • Ocean and Polar Research
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    • v.35 no.4
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    • pp.299-312
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    • 2013
  • This study analyzed the species composition and density of a macrobenthic community according to variations in the thermal discharge volumes of a nuclear power plant before, during, and after the shutdown of the nuclear power plant during two periods. In this study, 369 macrobenthic fauna species were collected, and their mean density was 1,712 ind. $m^{-2}$. The number of species and diversity of macrobenthic fauna decreased with distance from the thermal discharge area, regardless of whether the nuclear plant shutdown or not. Many macrobenthic taxa appeared near the thermal discharge area, but polychaetes species were more prominent in outer areas than at the discharge area. The density of macrobenthic fauna decreased with distance from the thermal discharge area during a plant shutdown in the fall of 2011, but increased, except at two sites, near the discharge area in the winter of 2012. Cluster analysis indicated that the spatial distribution of the macrobenthic community changed in areas near the nuclear power plant after a shutdown period; that is, the station group I, in areas near the nuclear power plant, became narrower after the shutdown, but it recovered to previously occupied areas after the nuclear power plant began operating again. Opportunistic species, such as the polychaetes Lumbrineris longifolia (= Scoletoma longifolia) and Mediomastus californiensis, which were present in high densities near thermal discharge areas, decreased after the shutdown but recovered after the plant re-opened. The number of species and diversity of the macrofauna and the density of dominant species showed a significant correlation with temperature, except in winter periods. The results of this study revealed that changes in the amount of thermal discharge before and after the shutdown of a nuclear power plant could exert an influence on the structure of macrobenthic community within the thermal discharge areas depending on the season.

miRNA-183 Suppresses Apoptosis and Promotes Proliferation in Esophageal Cancer by Targeting PDCD4

  • Yang, Miao;Liu, Ran;Li, Xiajun;Liao, Juan;Pu, Yuepu;Pan, Enchun;Yin, Lihong;Wang, Yi
    • Molecules and Cells
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    • v.37 no.12
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    • pp.873-880
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    • 2014
  • In our previous study, miRNA-183, a miRNA in the miR-96-182-183 cluster, was significantly over-expressed in esophageal squamous cell carcinoma (ESCC). In the present study, we explored the oncogenic roles of miR-183 in ESCC by gain and loss of function analysis in an esophageal cancer cell line (EC9706). Genome-wide mRNA micro-array was applied to determine the genes that were regulated directly or indirectly by miR-183. 3'UTR luciferase reporter assay, RT-PCR, and Western blot were conducted to verify the target gene of miR-183. Cell culture results showed that miR-183 inhibited apoptosis (p < 0.05), enhanced cell proliferation (p < 0.05), and accelerated G1/S transition (p < 0.05). Moreover, the inhibitory effect of miR-183 on apoptosis was rescued when miR-183 was suppressed via miR-183 inhibitor (p < 0.05). Western blot analysis showed that the expression of programmed cell death 4 (PDCD4), which was predicted as the target gene of miR-183 by microarray profiling and bioinformatics predictions, decreased when miR-183 was over-expressed. The 3'UTR luciferase reporter assay confirmed that miR-183 directly regulated PDCD4 by binding to sequences in the 3'UTR of PDCD4. Pearson correlation analysis further confirmed the significant negative correlation between miR-183 and PDCD4 in both cell lines and in ESCC patients. Our data suggest that miR-183 might play an oncogenic role in ESCC by regulating PDCD4 expression.

Anti-adherence of Antibacterial Peptides and Oligosaccharides and Promotion of Growth and Disease Resistance in Tilapia

  • Peng, K.S.;She, R.P.;Yang, Y.R.;Zhou, X.M.;Liu, W.;Wu, J.;Bao, H.H.;Liu, T.L.
    • Asian-Australasian Journal of Animal Sciences
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    • v.20 no.4
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    • pp.569-576
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    • 2007
  • Four hundred and fifty tilapias ($6.77{\pm}0.23$ g) were assigned randomly to six groups to evaluate the feasibility of the tested antibacterial peptides (ABPs) and oligosaccharides as substitutes for antibiotics. The control group was fed with a commercial tilapia diet; other five groups were fed with the same commercial diet supplemented with konjac glucomannan (KGLM), cluster bean galactomannan (CBGAM), and three animal intestinal ABPs derived from chicken, pig and rabbit at 100 mg/kg respectively. After 21 days of feeding, growth, disease resistance, and in vivo anti-adherence were determined. Furthermore, the inhibitory effect of tested agents on adhesion of Aeromonas veronii biovar sobria (A.vbs) strain BJCP-5 to tilapia enteric epithelia in vitro was assessed by cell-ELISA system. As a result, the tested agents supplemented at 100 mg/kg show significant benefit to tilapia growth and disease resistance (p<0.05), and the benefit may be correlated with their interfering in the contact of bacteria with host mucosal surface. Although none of the tested agents did inhibit the growth of BJCP-5 in tryptic soy broth at $100{\mu}g/ml$, all of them did inhibit the adhesion of A.vbs to tilapia enteric epithelia in vivo and in vitro. In vitro mimic assays show that three ABPs at low concentrations of $25{\mu}g/ml$ and $2.5{\mu}g/ml$ have the reciprocal dose-dependent anti-adherence effect. The inhibition of ABPs may be correlated with a cation bridging and/or receptor-ligand binding, but not with hydrophobicity. The KGLM and CBGAM inhibited the adherence of BJCP-5 to tilapia enteric epithelia with dose-dependent manner in vitro, and this may be through altering bacterial hydrophobicity and interfering with receptor-ligand binding. Our results indicate that the anti-adherence of the tested ABPs and oligosaccharides may be one of the mechanisms in promoting tilapia growth and resistance to A.vbs.

Effect of Oral Administration of Intact Casein on Gastrointestinal Hormone Secretion and Pancreatic α-Amylase Activity in Korean Native Steer

  • Lee, S.B.;Choi, C.W.;Jin, Y.C.;Wang, T.;Lee, K.H.;Ku, M.B.;Hwang, J.H.;Kim, K.H.;Vega, R.S.A.;Lee, H.G.
    • Asian-Australasian Journal of Animal Sciences
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    • v.26 no.5
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    • pp.654-660
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    • 2013
  • Three Korean native steers ($779{\pm}24$ kg) fitted with duodenal cannulas were used in a $3{\times}3$ Latin square design to investigate the influence of oral administration of soluble proteins, intact casein (IC) and acid hydrolyzed casein (AHC), on gastro-intestinal hormone (GIH) secretion in the blood and pancreatic ${\alpha}$-amylase activity in the duodenum. Oral treatment consisted of a basic diet (control), IC (C+100% protein), or AHC (C+80% amino acid, 20% peptide) for 21 d. Blood and duodenum samples were collected for measurement of serum GI hormones, and pancreatic ${\alpha}$-amylase activity was determined at 900, 1030, 1330, 1630, and 1930 h after feeding on d 21 of treatment. The levels of serum cholecystokinin (CCK) and secretin in the IC treatment group were higher compared to the other treatment groups (p<0.05). In addition to the changes in CCK and secretin levels upon IC treatment, the pancreatic ${\alpha}$-amylase activity in the duodenum was higher in the IC group compared to the control diet group (p<0.05). The response of serum ghrelin to IC and AHC treatment was in accordance with the response of serum secretin. The level of peptide fragments flowing in the duodenum was higher in the IC treatment group than the other treatment groups (p<0.05). In conclusion, this study demonstrated that an increase in duodenal CCK and secretin upon IC oral administration increased pancreatic ${\alpha}$-amylase secretion. In addition, ghrelin may be associated with GI hormone secretion in Korean native steers.

Community Structure and Understory Vegetation Distribution Pattern of Fagus engleriana Stand in Is. Ulleung (울릉도 너도밤나무림의 군집구조와 하층식생의 분포특성)

  • Cheon, Kwang-Il;Jung, Sung-Cheol;Lee, Chang-Woo;Byeon, Jun-Gi;Joo, Sung-Hyun;You, Ju-Han;Lee, Seul-Gi;Choi, Cheol-Hyun;Park, In-Hwan
    • Journal of the Korean Society of Environmental Restoration Technology
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    • v.15 no.4
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    • pp.81-95
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    • 2012
  • This study was intended for Fagus engleriana stand in Is. Ulleung where the disturbance of vegetation has been caused by the exploitation and the increase of tourists. For the effective conservation and management on this issue, this study was conducted provide basic data. The sixteen study sites ($20{\times}20m$) were installed in the dominant Fagus engleriana stand and the base environment and vegetation were investigated. The Fagus engleriana stand was classified into two groups, The Fagus engleriana stand was classified into two groups, community A is Fagus engleriana-Sorbus amurensis and community B is Fagus engleriana-Acer pictum subsp. Mono by cluster analysis and community A were nothing signigicant by indicator species analysis. Community B were Eight species (Tsuga sieboldii, Camellia japonica, Dystaenia takesimana ect.) significant by indicator species analysis. The diameter class of 16cm to 25cm was 53.7% in population structure of Fagus engleriana, which was the highest and showed inverse J-distribution. Species diversity index (H') of investigated woody layer group ranged from 0.99 to 2.05 and that of under layer group ranged from 1.75~2.59. According to Non-metric Multidimensional Scaling (NMS) analysis, the woody layer was divided into community A developed in the region having relatively high sand content at high altitudes and community B formed at the place having relatively high clay content at low altitudes. Then this classification was significant through Multi-Response Permutation Procedures (MRPP) analysis. The distribution of understory vegetation through Detrended Correspondence Analysis (DCA) was induced by the silt content and cover degree of vegetation layer.