• Title/Summary/Keyword: Linearized Suffix trees

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A Generalization of the Linearized Suffix Tree to Square Matrices

  • Na, Joong-Chae;Lee, Sun-Ho;Kim, Dong-Kyue
    • Journal of Korea Multimedia Society
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    • v.13 no.12
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    • pp.1760-1766
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    • 2010
  • The linearized suffix tree (LST) is an array data structure supporting traversals on suffix trees. We apply this LST to two dimensional (2D) suffix trees and obtain a space-efficient substitution of 2D suffix trees. Given an $n{\times}n$ text matrix and an $m{\times}m$ pattern matrix over an alphabet ${\Sigma}$, our 2D-LST provides pattern matching in $O(m^2log{\mid}{\Sigma}{\mid})$ time and $O(n^2)$ space.