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Porcine Fatty Acid Synthase Gene Polymorphisms Are Associated with Meat Quality and Fatty Acid Composition

  • Kim, Sang-Wook;Choi, Yang-Il;Choi, Jung-Suck;Kim, Jong-Joo;Choi, Bong-Hwan;Kim, Tae-Hun;Kim, Kwan-Suk
    • Food Science of Animal Resources
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    • v.31 no.3
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    • pp.356-365
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    • 2011
  • We assessed the effects of single-nucleotide polymorphisms (SNPs) within the porcine fatty acid synthase (FASN) gene regarding meat quality and fatty acid composition in two pig populations: Korean native pigs (KNP) were crossed with Yorkshire (YS) $F_2$, and KNP were crossed with Landrace (LR) $F_2$. Direct DNA sequencing using eight KNP and eight YS pigs revealed two SNPs: c.265C>T (silent) in exon 4 and c.6545A>C (Asn${\rightarrow}$His) in exon 39. The frequency of the two SNPs was analyzed using the polymerase chain reaction-restriction fragment length polymorphism method in seven pig breeds and their association with meat quality traits and fatty acid composition was studied. In the $KNP{\times}YSF_2$ population, both SNPs were significantly associated with the level of monounsaturated fatty acids, including palmitoleic (C16:1) and oleic acid (C18:1) (p<0.005). c.6545A>C was associated with intramuscular fat content in both populations. Our results indicate that variations in c.265C>T and c.6545A>C of the pig FASN can be used to select animals with better fatty acid composition and meat quality. Moreover, KNP was a useful breed for identifying genetic factors affecting meat quality and fatty acid composition and for producing high quality pork.

Effects of Acupuncture and Moxibustion at SP6(Sanyinjiao) on the Temperature Change of Feet in Healthy Adults (삼음교(三陰交)(SP6) 침구자극(鍼灸刺戟)이 정상 성인의 족부(足部) 온도 변화에 미치는 영향)

  • Kim, June Hyun;Choi, Han Gyul;Park, Min Cheol;Jo, Eun Heui
    • Journal of Acupuncture Research
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    • v.33 no.3
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    • pp.75-87
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    • 2016
  • Objectives : The purpose of this study is to investigate the effects of acupuncture and moxibustion treatment at SP6(Sanyinjiao) on the temperature change of feet in healthy adults and evaluate whether SP6 has an effect on cold hypersensitivity of feet. Methods : Subjects of this study were 61 healthy adults consisting of 21 in the acupuncture treatment group, 21 in the moxibustion treatment group and 19 in the control group, selected at random. After starting the experiment, the subjects laid straight on their back and relaxed for 30 minutes. Pictures were then taken of their feet by DITI 3 times before and after treatment. The treatment was carried out by either 15 minutes of acupuncture or 2 pieces of moxibustion at SP6. Whilst the control group rested lying straight. After taking pictures the temperatures of LR2, GB42, ST42, KI1, center of the plantar, and center of the calcaneus were checked and the SPSS for Windows Version 20.0 was used to evaluate the statistical significance by the paired t-test, Wilcoxon signed-ranks test(in group) and the Mann-Whitney U-test(between the groups). Results : Some temperature changes before and after treatment were observed in each of the 12 areas, most of which were not significant. But as a result of comparing the temperature difference of all the samples without dividing the area of each group, the mean temperatures in the acupuncture and moxibustion group were significantly elevated. A comparison between the groups showed the mean temperature of the acupuncture and moxibustion group to be significantly elevated, more so than the control group. Conclusion : The result of this study suggests acupuncture and moxibustion treatment at SP6 has the effect of the rising temperature of feet temporarily.

Prevalence of Sexually Transmitted Pathogen Coinfections in High Risk-Human Papillomaviruses Infected Women in Busan

  • Choi, Sun Hee;Jin, Hyunwoo;Lee, Kyung Eun
    • Biomedical Science Letters
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    • v.25 no.4
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    • pp.390-397
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    • 2019
  • High risk-human papillomavirus (HR-HPV) is known to be a major cause of cervical cancer, and coinfection of sexually transmitted pathogen (STP) has been reported to cause persistent HPV infection. However, the relationship between HPV and STP coinfection remains unclear. The purpose of this study was to analyze the coinfection rate with STP in high-risk human papillomavirus infected women in Busan and to collect basic data for the prevention of cervical lesions. This study was carried out in 355 women who had concurrent HPV and STP screening at Busan local hospital between January 2016 and December 2017. HPV and STP coinfection was found in 187 (52.7%) out of 355 cases. HR-HPV and STP coinfection was 82.9% higher than LR-HPV and STP coinfections 17.1%. In HR-HPV infection, Ureaplasma species was the most common pathogen (47.1%), followed by C. trachomatis (21.9%) and Mycoplasma species (12.3%). In the analysis of HR-HPV genotype according to STP, HPV 16 (12.0%) was the most frequent, followed by HPV 58 (11.6%), HPV 39 (11.1%) and HPV 52 (10.2%), but HPV 18 showed a low coinfection rate of 1.3%. According to the results of age, HR-HPV and STP coinfection rate was the highest at 41.9% among women aged 18 to 29. HR-HPV and Ureaplasma species showed the highest coinfection rates at all ages, followed by C. trachomatis and Mycoplasma species. Further studies with more samples will be needed to determine if the coinfection of HR-HPV and STPs is involved in the development of cervical tumors through histologic changes.

The Effects of Sa-am Acupuncture Simpo-jeongkyeok Treatment on the Blood Pressure, Pulse Rate, and Body Temperature

  • Choi, Woo-Jin;Cho, Yoon-Young;Sun, Seung-Ho
    • Journal of Pharmacopuncture
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    • v.18 no.2
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    • pp.33-41
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    • 2015
  • Objectives: The present study evaluated the effects of sa-am acupuncture (SAA) simpo-jeongkyeok (SPJK) treatment on the blood pressure (BP), pulse rate (PR), and body temperature (BT) of patients with hwa byung (HB). Methods: This patient assessor blind, randomized, placebo controlled trial included 50 volunteers, divided randomly into two groups. The treatment group underwent SPJK (PC9, LR1, PC3, KI10) while the control (sham) group received minimal needle insertion at non acupoints. The BP in both arms, PR, and BT at several acupoints were measured before and after treatment at the $1^{st}$, $2^{nd}$, $3^{rd}$, and $4^{th}$ visits and before treatment at the follow-up visit. We analyzed data by using the repeated measured analysis of variance (RM ANOVA), Mann-Whitney U, and wilcoxon signed rank tests; differences at P < 0.05 were considered significant. Results: No significant differences in the systolic blood pressure (SBP), diastolic blood pressure (DBP) and PR between the treatment and control group were observed at each visit. However, the decrease in the SBP for the treatment group before and after each visit was significantly higher than it was in the control group. The SBP in both arms in the treatment group was decreased between visits 1 and 2, 1 and 3, 1 and 4, and 1 and follow-up. The DBP in both arms and in the right arm between visits 1 and 3 in the treatment group showed decreases. A minimal BT increase for treatment at CV06 and CV12 and a minimal BT decrease for treatment at CV17 and (Ex) Yintang were found. Patients in the treatment group who visited more frequently experienced a greater decrease in the PR, but that effect was not maintained. Conclusion: The results suggest that SAA SPJK treatment has instant positive effects on the BP, PR, and BT in patients with HB, but the effects on the BP and PR are not maintained.

SLA Homozygous Korean Native Pigs and Their Inbreeding Status Deduced from the Microsatellite Marker Analysis

  • Jung, Woo-Young;Lim, Hyun-Tae;Lim, Jae-Sam;Kim, Sung-Bok;Jeon, Jin-Tae;Lee, Jun-Heon
    • Journal of Animal Science and Technology
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    • v.52 no.6
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    • pp.451-457
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    • 2010
  • The porcine MHC (Major Histocompatibility Complex), encoding the SLA (Swine Leukocyte Antigen) genes, is one of the most significant regions associated with immune rejection in relation to transplantation. In this study, three SLA class I (SLA-1, SLA-3, SLA-2) loci and three SLA class II (DRB1, DQB1, DQA) loci were investigated in the previously unidentified Korean native pig (KNP) population that was closely inbred in the Livestock Technology Research Station in Cheongyang, Korea. Total thirteen KNPs from four generations were genotyped for the SLA alleles and haplotypes were investigated using PCR-SSP (Sequence-Specific Primer) method. The results showed that all of these KNPs had Lr-56.30/56.30 homozygous haplotype, indicating high level of inbreeding in the SLA genes. The inbreeding status of these animals was also investigated using microsatellite (MS) markers. From the 50 MS markers investigated, 17 MS markers were fixed in all generations and the fixed alleles are increased as 26 loci for the fourth generation. Two MS markers, S0069 and SW173, were heterozygous for all the animals tested. Observed and expected heterozygosities were calculated and the average inbreeding coefficients for each generation were also calculated. In the fourth generation, the average inbreeding coefficients was 0.732 and this may increase with further inbreeding process. Analysis of the SLA haplotypes and MS alleles can give important information for breeding the pigs for xenotransplantation studies.

Optimised neural network prediction of interface bond strength for GFRP tendon reinforced cemented soil

  • Zhang, Genbao;Chen, Changfu;Zhang, Yuhao;Zhao, Hongchao;Wang, Yufei;Wang, Xiangyu
    • Geomechanics and Engineering
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    • v.28 no.6
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    • pp.599-611
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    • 2022
  • Tendon reinforced cemented soil is applied extensively in foundation stabilisation and improvement, especially in areas with soft clay. To solve the deterioration problem led by steel corrosion, the glass fiber-reinforced polymer (GFRP) tendon is introduced to substitute the traditional steel tendon. The interface bond strength between the cemented soil matrix and GFRP tendon demonstrates the outstanding mechanical property of this composite. However, the lack of research between the influence factors and bond strength hinders the application. To evaluate these factors, back propagation neural network (BPNN) is applied to predict the relationship between them and bond strength. Since adjusting BPNN parameters is time-consuming and laborious, the particle swarm optimisation (PSO) algorithm is proposed. This study evaluated the influence of water content, cement content, curing time, and slip distance on the bond performance of GFRP tendon-reinforced cemented soils (GTRCS). The results showed that the ultimate and residual bond strengths were both in positive proportion to cement content and negative to water content. The sample cured for 28 days with 30% water content and 50% cement content had the largest ultimate strength (3879.40 kPa). The PSO-BPNN model was tuned with 3 neurons in the input layer, 10 in the hidden layer, and 1 in the output layer. It showed outstanding performance on a large database comprising 405 testing results. Its higher correlation coefficient (0.908) and lower root-mean-square error (239.11 kPa) were obtained compared to multiple linear regression (MLR) and logistic regression (LR). In addition, a sensitivity analysis was applied to acquire the ranking of the input variables. The results illustrated that the cement content performed the strongest influence on bond strength, followed by the water content and slip displacement.

Water balance change at a transiting subtropical forest in Jeju Island

  • Kim, JiHyun;Jo, Kyungwoo;Kim, Jeongbin;Hong, Jinkyu;Jo, Sungsoo;Chun, Jung Hwa;Park, Chanwoo;Kim, Yeonjoo
    • Proceedings of the Korea Water Resources Association Conference
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    • 2022.05a
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    • pp.99-99
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    • 2022
  • Jeju island has a humid subtropical climate and this climate zone is expected to migrate northward toward the main land, Korea Peninsula, as temperature increases are accelerated. Vegetation type has been inevitably shifted along with the climatic change, having more subtropical species native in southeast Asia or even in Africa. With the forest composition shift, it becomes more important than ever to analyze the water balance of the forest wihth the ongoing as well as upcoming climate change. Here, we implemented the Ecosystem Demography Biosphere Model (ED2) by initializing the key variables using forest inventory data (diameter at breast height in 2012). Out of 10,000 parameter sets randomly generated from prior distribution distributions of each parameter (i.e., Monte-Carlo Method), we selected four behavioral parameter sets using remote-sensing data (LAI-MOD15A2H, GPP-MOD17A2H, and ET-MOD16A2, 8-days at 500-m during 2001-2005), and evaluated the performances using eddy-covariance carbon flux data (2012 Mar.-Sep. 30-min) and remote sensing data between 2006-2020. We simulated each of the four RCP scenarios (2.6, 4.5, 6.0, and 8.5) from four climate forcings (GFDL-ESM2M, HadGEM2-ES, IPSL-CM5A-LR, and MIROC5 from ISIMIP2b). Based on those 64 simulation sets, we estimate the changes in water balance resulting from the forest composition shift, and also uncertainty in the estimates and the sensitivity of the estimates to the parameters, climate forcings, and RCP scenarios.

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ea­-RED++: Adding Prediction Algorithm for ea­-RED Router Buffer Management Algorithm (ea-­RED++ : 예측 알고리즘을 적용한 ea-­RED 알고리즘)

  • Lee, Jong-Hyun;Lim, Hye-Young;Hwang, Jun;Kim, Young-Chan
    • Proceedings of the Korean Information Science Society Conference
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    • 2003.10c
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    • pp.298-300
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    • 2003
  • ea­RED(Efficient Adaptive RED)[1][2]는 다수의 TCP 커넥션이 경쟁하는 병목구간에서 인터넷 라우터 버퍼를 능동적으로 관리하는 다양한 AQM(Active Queue Management) 알고리즘 중의 하나로 RED 라우터 버퍼 관리 알고리즘의 성능을 개선한 라우터 버퍼 관리 알고리즘이다. RED 라우터가 TD 라우터와 같은 네트워크 퍼포먼스를 유지하면서 TCP 커넥션 간 페어니스를 향상시키기 위해서는 link bandwidth. active 커넥션 수. congestion level 등에 대한 네트워크 상태를 고려하여 파라미터에 적절한 값을 설정해야만 한다. 문제는 다이내믹하게 변하는 네트워크 상황에 적합한 파라미터 값을 초기에 설정해주는 것이 매우 어렵다는 점이다. [3]. ea­RED는 max threshold와 min threshold 값을 네트워크 상황에 따라 동적으로 조절함으로써 이런 문제를 해결했고, 기존 RED에 비해 라우터 버퍼는 50% 정도만 사용하면서도, 페어니스 인덱스(Fairness Index)[4]가 최대 41.42% 개선되었다. [1] [2] 그러나 송신 TCP 커넥션의 수가 늘어날수록 성능향상에 대한 효과가 감소되었고, 드롭 패킷수가 TD나 RED 라우터 버퍼관리 알고리즘에 비해 많았기 때문에 라우터의 출력(output) 총 패킷 용량이 최대 약 2.3% 정도 TD나 RED 라우터 버퍼관리 알고리즘에 비해 적었다. 이 부분을 개선하기 위해 기존 ea­RED 알고리즘에 LR_Lines 예측 알고리즘을 적용한 ea­RED++ 알고리즘을 구현하였고, 실험 결과 페어니스 인덱스는 기존 ea­RED에 비해 최대 약 30% 정도 향상되었고, 총 output 패킷 용량의 손실률은 최대 50%정도 감소하여 기존 ea­RED에 비해 향상된 성능을 보여주었다.웍스 네트워크상의 다양한 디바이스들간의 네트워크 다양화와 분산화 기능을 얻을 수 있었고, 기존의 고가의 해외 솔루션인 Echelon사의 LonMaker 소프트웨어를 사용하지 않고도 국내의 순수 솔루션인 리눅스 기반의 LonWare 3.0 다중 바인딩 기능을 통해 저 비용으로 홈 네트워크 구성 관리 서버 시스템 개발에 대한 비용을 줄일 수 있다. 기대된다.e 함량이 대체로 높게 나타났다. 점미가 수가용성분에서 goucose대비 용출함량이 고르게 나타나는 경향을 보였고 흑미는 알칼리가용분에서 glucose가 상당량(0.68%) 포함되고 있음을 보여주었고 arabinose(0.68%), xylose(0.05%)도 다른 종류에 비해서 다량 함유한 것으로 나타났다. 흑미는 총식이섬유 함량이 높고 pectic substances, hemicellulose, uronic acid 함량이 높아서 콜레스테롤 저하 등의 효과가 기대되며 고섬유식품으로서 조리 특성 연구가 필요한 것으로 사료된다.리하였다. 얻어진 소견(所見)은 다음과 같았다. 1. 모년령(母年齡), 임신회수(姙娠回數), 임신기간(姙娠其間), 출산시체중등(出産時體重等)의 제요인(諸要因)은 주산기사망(周産基死亡)에 대(對)하여 통계적(統計的)으로 유의(有意)한 영향을 미치고 있어 $25{\sim}29$세(歲)의 연령군에서, 2번째 임신과 2번째의 출산에서 그리고 만삭의 임신 기간에, 출산시체중(出産時體重) $3.50{\sim}3.99kg$사이의 아이에서 그 주산기사망률(周産基死亡率)이 각각 가장 낮았다. 2. 사산(死産)과 초생아사망(初生兒死亡)을 구분(區分)하여 고려해 볼때 사산(死産)은 모성(母性)의 임신력(姙娠歷)과 매우 밀접한 관련이 있는 것으로 사료(思料)되었고 초생아사망(初生兒死亡)은 미숙아(未熟兒)와 이에 관련된 병

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Variations of Biogenic Components in the Region off the Lutzow-Holm Bay, East Antarctica during the Last 700 Kyr (지난 70만 년 동안 동남극 Lutzow-Holm만 주변 해역의 생물기원 퇴적물 함량 변화)

  • Kim, Yeo-Hun;Katsuki, Kota;Suganuma, Yusuke;Ikehara, Minoru;Khim, Boo-Keun
    • Ocean and Polar Research
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    • v.33 no.3
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    • pp.211-221
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    • 2011
  • Contents of biogenic components [opal, $CaCO_3$, TOC (total organic carbon)] were measured in Core LHB-3PC sediments collected off Lutzow-Holm Bay, in order to understand glacial-interglacial cyclic variation of the high-latitude surface-water paleoproductivity, in the Indian Sector of the Southern Ocean. An age model was established from the correlation of ARM/IRM ratios of Core LHB-3PC with LR04 stack benthic ${\delta}^{18}O$ records, in complement with radiocarbon isotope ages and biostratigraphic Last Appearance Datum (LAD). The core-bottom age was estimated to be about 700 ka. Although the $CaCO_3$ content is very low less than 1.0% throughout the core, the opal and TOC contents show clear glacial-interglacial cyclic variation such that they are high during the interglacial periods (7.2-50.3% and 0.05-1.00%, respectively) and low during the glacial periods (5.2-25.2% and 0.01-0.68%, respectively). According to the spectral analysis, the variation of opal content is controlled mainly by eccentricity forcing and subsequently by obliquity forcing during the last 700 kyrs. The opal contents of Core LHB-3PC also represent the apparent Mid-Pleistocene Transition (MPT)-related climatic variation in the glacial-interglacial cycles. In particular, the orbital variation of the opal contents shows increasing amplitudes since marine isotope stage (MIS) 11, which defines one of the important paleoclimatic events during the late Quaternary, called the "Mid-Brunhes Event". Based on the variation of the opal contents in Core LHB-3PC, we suggest that the surface-water paleoproductivity in the Indian Sector of the Southern Ocean followed the orbital (glacial-interglacial) cycles, and was controlled mainly by the extent of sea ice distribution during the last 700 kyrs.

Comparative assessment of frost event prediction models using logistic regression, random forest, and LSTM networks (로지스틱 회귀, 랜덤포레스트, LSTM 기법을 활용한 서리예측모형 평가)

  • Chun, Jong Ahn;Lee, Hyun-Ju;Im, Seul-Hee;Kim, Daeha;Baek, Sang-Soo
    • Journal of Korea Water Resources Association
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    • v.54 no.9
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    • pp.667-680
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    • 2021
  • We investigated changes in frost days and frost-free periods and to comparatively assess frost event prediction models developed using logistic regression (LR), random forest (RF), and long short-term memory (LSTM) networks. The meteorological variables for the model development were collected from the Suwon, Cheongju, and Gwangju stations for the period of 1973-2019 for spring (March - May) and fall (September - November). The developed models were then evaluated by Precision, Recall, and f-1 score and graphical evaluation methods such as AUC and reliability diagram. The results showed that significant decreases (significance level of 0.01) in the frequencies of frost days were at the three stations in both spring and fall. Overall, the evaluation metrics showed that the performance of RF was highest, while that of LSTM was lowest. Despite higher AUC values (above 0.9) were found at the three stations, reliability diagrams showed inconsistent reliability. A further study is suggested on the improvement of the predictability of both frost events and the first and last frost days by the frost event prediction models and reliability of the models. It would be beneficial to replicate this study at more stations in other regions.