• Title/Summary/Keyword: Korean isolate

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Morphological and Molecular Identification of Penicillium islandicum Isolate KU101 from Stored Rice

  • Oh, Ji-Yeon;Kim, Eui-Nam;Ryoo, Mun-Il;Kim, Ki-Deok
    • The Plant Pathology Journal
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    • v.24 no.4
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    • pp.469-473
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    • 2008
  • We have previously obtained a representative isolate KU101 of the predominant Penicillium species from rice under indoor storage conditions. In this study we attempted to characterize isolate KU101 using its morphological and molecular characteristics. When the micro- and macroscopic characteristics of isolate KU101 were compared with the P. islandicum reference isolate KCCM 34763, isolate KU101 was generally identical to those of isolate KCCM 34763, however, isolate KU101 grew faster and produced more orange to red pigments than isolate KCCM 34763. In a molecular-based identification, the nuclear sequence of the ITS1-5.8S-ITS2 region of isolate KU101 was most closely related to that of P. islandicum. Therefore, these results indicated that isolate KU101 from stored rice could be identified as P. islandicum, some isolates of which are known to produce mycotoxins.

Biological Control of Fusarium Wilt of Spinach by Nonpathogenic Isolates of Fusarium oxysporum (비병원성 Fusarium oxysporum 구조를 이용한 시금치 시들음병의 생물학적 방제)

  • 신동범;죽원이명
    • Korean Journal Plant Pathology
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    • v.14 no.2
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    • pp.145-149
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    • 1998
  • Four nonpathogenic isolates of Fusarium oxysporum isolated from spinach showed suppressive effect on the occurrence of the Fusarium wilt of spinach caused by F. oxysporum f. sp. sprinaciae, among which NF01 controlled the disease most effectively. And NF01 was not pathogenic to tomato, cucumber, radish and spinach. This isolate was further tested for the biological control of the disease. The isolate was not inhibitory to the growth of the pathogen on potato sucrose agar medium, however the Fusarium wilt disease occurred less by drenching spore suspension of the nonpathogenic isolate. The control effect of the isolate was higher at lower inoculum level of the pathogen than at the higher inoculum level, and in the pretreatments than the simultaneous treatment of the isolate with the pathogen inoculation. The nit mutants of the isolate were easily formed on chlorate containing media, and was reisolated selectively as nit mutant from infected soil and plants. The reisolation rate of the isolate as opposed to pathogen was high at preinoculated soil and plants relative to the simultaneous inoculation of the isolate with the pathogen.

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Identification and Tolerance-Test to Digestive Fluids of Lactobacilli Isolated from Korean Liquid Yogurts (국내 액상발효유에서 분리한 유산균의 동정 및 소화관액 내성조사)

  • So, Myeong-Hwan
    • Korean Journal of Food Science and Technology
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    • v.17 no.3
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    • pp.192-196
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    • 1985
  • Eight strains of Lactobacilli(a, b, b', c, d, e, f and g) were isolated from seven Korean liquid-yogurts(A, B, C, D, E, F and G), and identification and tolerance-test to digestive fluids were carried out. Isolate a from yogurt A and isolate a from yogurt E were identified as L. casei, isolate b from yogurt B as L. acidophilus, isolate d from yogurt D as L. bulgaricus, isolate f from yogurt F as L. helveticus, and isolate b' from yogurt B, isolate c from yogurt C and isolate g from yogurt G as L. jugurti, respectively. Isolate f(L. helveticus) and c(L. jugurti) showed high tolerance to artificial gastric juice but didn't to bile acid. Isolate b(L. acidophilus), a(L. casei), and e(L. casei) showed high tolerance to both artificial gastric juice and bile acid, but isolate d(L. bulgaricus), b'(L. jurgurti) and g(L. jugurti) did not.

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Race- and Isolate-specific Molecular Marker Development through Genome-Realignment Enables Detection of Korean Plasmodiophora brassicae Isolates, Causal agents of Clubroot Disease

  • Jeong, Ji -Yun;Robin, Arif Hasan Khan;Natarajan, Sathishkumar;Laila, Rawnak;Kim, Hoy-Taek;Park, Jong-In;Nou, Ill-Sup
    • The Plant Pathology Journal
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    • v.34 no.6
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    • pp.506-513
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    • 2018
  • Clubroot is one of the most economically important diseases of the Brassicaceae family. Clubroot disease is caused by the obligate parasite Plasmodiophora brassicae, which is difficult to study because it is nonculturable in the laboratory and its races are genetically variable worldwide. In Korea, there are at least five races that belongs to four pathotype groups. A recent study conducted in Korea attempted to develop molecular markers based on ribosomal DNA polymorphism to detect P. brassicae isolates, but none of those markers was either race-specific or pathotype-specific. Our current study aimed to develop race- and isolate-specific markers by exploiting genomic sequence variations. A total of 119 markers were developed based on unique variation exists in genomic sequences of each of the races. Only 12 markers were able to detect P. brassicae strains of each isolate or race. Ycheon14 markers was specific to isolates of race 2, Yeoncheon and Hoengseong. Ycheon9 and Ycheon10 markers were specific to Yeoncheon isolate (race 2, pathotype 3), ZJ1-3, ZJ1-4 and ZJ1-5 markers were specific to Haenam2 (race 4) isolate, ZJ1-35, ZJ1-40, ZJ1-41 and ZJ1-49 markers were specific to Hoengseong isolate and ZJ1-56 and ZJ1-64 markers were specific to Pyeongchang isolate (race 4, pathotype 3). The PCR-based sequence characterized amplified region (SCAR) markers developed in this study are able to detect five Korean isolates of P. brassicae. These markers can be utilized in identifying four Korean P. brassicae isolates from different regions. Additional effort is required to develop race- and isolate-specific markers for the remaining Korean isolates.

First Detection of Penicillium fellutanum from Stored Rice in Korea

  • Oh, Ji-Yeon;Sang, Mee-Kyung;Lee, Ho-Joung;Ryoo, Mun-Il;Kim, Ki-Deok
    • Research in Plant Disease
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    • v.17 no.2
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    • pp.216-221
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    • 2011
  • A representative isolate KU53 of the predominant Penicillium species was obtained from rice samples from rice processing complexes of National Agricultural Cooperative Federation in Korea. In this study, isolate KU53 was identified by its morphological and molecular characteristics. The macro- and microscopic characteristics of isolate KU53 were compared with the P. fellutanum reference isolate KCTC16913 on different media; isolate KU53 was generally identical to those of the reference isolate KCTC16913. In a molecular-based identification, the ${\beta}$-tubulin and translation elongation factor 1-alpha sequences of isolate KU53 was most closely related to those of P. fellutanum. Thus, isolate KU53 from stored rice could be identified as P. fellutanum, some isolates of which are known to produce mycotoxin-related metabolites. To our knowledge, this is the first detection of P. fellutanum from stored rice in Korea.

Screening of Different Media and Substrates for Cultural Variability and Mass Culture of Arthrobotrys dactyloides Drechsler

  • Kumar, D.;Singh, K.P.;Jaiswal, R.K.
    • Mycobiology
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    • v.33 no.4
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    • pp.215-222
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    • 2005
  • Variability in growth and sporulation of five isolates of Arthrobotrys dactyloides was studied on five agar, 6 bran and 5 grain media. Potato dextrose agar (PDA) supported maximum growth of isolate A, C and E, while growth of isolate Band D was significantly lower on this medium. On Czapek's agar and yeast glucose agar media the differentiation in the isolates in relation to growth was poor than PDA. The other two media showed much poorer differentiation. On Czapek's agar medium, sporulation was recorded in isolate B only, whereas other isolates showed rare sporulation. Among the bran media, pea bran agar medium supported maximum growth of all the isolates except isolate B. Gram and rice bran agar media were next best. However, the growth of isolate B on the gram bran agar medium was more or less equal as other isolates. On pigeon pea bran agar medium, isolate E failed to grow while other isolates recorded poor growth. On lentil bran agar medium, only isolate Band D recorded little growth, whereas other isolates failed to grow. All the isolates recorded good sporulation on bran agar media except pigeon pea and lentil bran agar media. The grain agar media supported moderate to very good growth of all the isolates. In general isolate B remained slow growing on these media except gram grain and sorghum grain agar media on which growth of this isolate was comparable to other isolates. Sporulation in general, was good on all the grain agar media. Among different substrates screened, barley grain and pea bran were found superior to others for mass culture of isolate A of A. dactyloides.

Survey and Control of the Occurrence of Mycotoxins from Postharvest Cereals (수확 후 곡류에 발생하는 진균독소의 캄색과 방제 1. 옥수수, 밀에서 분리한 Penicillium이 생산하는 주요 진균독소)

  • 오소영;정일민;백수봉;유승헌
    • Korean Journal Plant Pathology
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    • v.14 no.6
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    • pp.700-704
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    • 1998
  • A total of 26 and 55 isolates of fungi were isolated from corn and wheat samples collected from different markets in Korea, respectively. The number of Penicillium isolates from corn and wheat was 9 and 33, respectively. The Penicillium species isolated from corn were P. chrysogenum (3 isolates) and P. oxalicum (6 isolates), and from wheat were P. aurantiogriseum (16 isolates), P. citrinum (1 isolate), P. commun (4 isolates), P. griseofulvum (1 isolate), P. verrucosum (7 isolates), and P. viridicatum (4 isolates). Production of major mycotoxins in the yeast extract sucrose medium cultures of Penicillium isolates was analysed. Penicillium cultures were extracted with chloroform and purified by thin-layer chromatograhy (TLC), and high performance liquid chromatography (HPLC). Among 9 isolates of Penicillium from corn, 2 isolates of P. chrysogenum produced patulin, 1 isolate of the fungus produced patulin and citrinin, 2 isolates of P. oxalicum produced penicillic acid, 4 isolates produced pencillic acid and griseofulvin. Of the 33 isolates of Penicillium from wheat, 6 isolates of P. aurantiogriseum produced patulin, 8 isolates produced penicillic acid, 1 isolate produced patulin and penicillic acid, 1 isolate of P. citrinum produced citrinin and patulin, 2 isolates of P. commun produced brefeldin A and patulin, 1 isolate of P. griseofulvum produced brefeldin A, griseofulvin and patulin. Five isolates of P. verrucosum produced patulin, 1 isolate of the fungus produced penicillic acid, and 3 isolates of P. viridicatium produced penicillic acid.

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Leaf blight of Castor Bean Plants caused by 2 Species of Phytophthora(oral)

  • Kim, B.S.;Y.S. Lim;Kim, J.H.
    • Proceedings of the Korean Society of Plant Pathology Conference
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    • 2003.10a
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    • pp.128.3-129
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    • 2003
  • A leaf blight disease caused by a species of Phytophthora has been observed on castor bean plants growing near dwelling houses in Manchon-dong, Daegu since 1993. The first isolate that we have kept was producing papillate, ovoid-obpyriform to obpyriform sporangia with on a simple sympodial sporangiophore from diseased tissue placed on water agar plates. The pure isolate, however, did not sporulate on agar media, and rarely even in water, but produced mycelial swellings and chlamydospores in water. Sporangia measured 26.1-77.4 ${\times}$ 23.2-44.0$\mu\textrm{m}$. Chlamydospores were either terminal or intercalary, and measured 24-29.4$\mu\textrm{m}$ in diameter. Sex organs were not formed in a single culture. In 2003, another pure isolate was isolated from castor bean plants with similar symptoms at the same place. The second isolate was distinct from the first one in that the second isolate was readily and abundantly sporulating on V8 juice agar plates. Sporangia of the second isolate were papillate, ovoid and caduceus with a pedicel. Sporangia measured 19.5-48.8 x 17.6-34.3$\mu\textrm{m}$ with 3.7$\mu\textrm{m}$ high papilla and 4.1$\mu\textrm{m}$ long pedicel. No sex organs were formed in a single isolate culture. Both isolates were pathogenic on castor bean plants. Results of the efforts to identify the two species of Phytophthora will be discussed.

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Identification and Fermentation of a Streptomyces Producing Aurodox Group Antibiotics

  • Kim, Si-Kwan;Yeo, Woon-Hyung;Kim, Sang-Seock
    • Journal of Microbiology and Biotechnology
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    • v.6 no.4
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    • pp.260-264
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    • 1996
  • An isolate, 90-GT-129 was found to produce antibiotics with a selective inhibitory activity against Streptococcus pyogenes and Xanthomonas sp. The isolate formed a gray spiral aerial spore mass with smooth surface. Analysis of the cell wall acid hydrolysate of the isolate revealed presence of LL-di-aminopimelic acid, which indicates that the isolate belongs to a cell wall type Ⅰ actinomycetes. Cultural and physiological characteristics of the isolate placed it in Streptomyces rochei synonym cluster. A comparison of the isolate with 26 reference strains of Streptomyces rochei synonym demonstrated differences in physiological and cultural characteristics.

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Taxonomy and Fermentation of Kitasatosporia kimorexae Producing New Thiopeptide Antibiotics, Kimorexins

  • Yeo, Woon-Hyung;Kim, Si-Kwan;Kim, Sang-Seock;Yu, Seung-Hun
    • Journal of Microbiology and Biotechnology
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    • v.4 no.4
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    • pp.354-359
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    • 1994
  • An isolate, 90-GT-302, was found to produce antibiotics inducing typical mycelial swelling in Magnaporthe grisea and Fusarium solani. This isolate formed yellow substrate and white rectiflexbiles aerial mycelia in the early stages of growth. The aerial mycelium gradually changed its color to white and finally formed a gray spore mass. Analysis of the cell wall acid hydrolysate revealed the presence of LL- and meso-diaminopimelic acids, glycine, and galactose, which indicated cell wall type X. This result placed our isolate in genus Kitasatosporia. A comparison of isolate 9O-GT-302 with reference strains of Kitasatosporia spp., which not only demonstrated several differences in their physiological properties but also novelty of the active compounds produced by this isolate, led us to designate the isolate as Kitasatosporia kimorexae.

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