• Journal of Plant Biology
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• v.30 no.2
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• pp.151-170
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• 1987

Taxa of genus Callicarpa in Korea were described taxonomically and studied interspecific relationships, based on the leaf length, leaf width, peduncle length, fruit width and geograhic distribution. Among 12 taxa reported previously in Korea, 3 forms of C. japonica were unifed to original species, C. japonica var. glabra was reserved, Whereas C. shirasawana was not distributed in Korea. As a result, 7 taxa belonging to 3 species, 4 varieties of genus Callicarpa remained. C. japonica complex is considered to be more advanced among the species compared with the bract shapes.

• The Korean Journal of Zoology
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• v.36 no.4
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• pp.535-544
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• 1993

Sinca early 1930' Colitis taenia striate were introduced to the Donsgjin in Chollabukdo, where it hybridized with an endemic subspecies C. tiutheri. Protein electrophoresis revealed high levels of hybridization with intensive backcrossing occupied approximately 20 kilometers of the river. This is roughly one-half of tech historic range of the endemic species. The average frequency of introduced alleles of three diagnostic loci ranged 0.03-0.46 among 11 sites in tech svrnpatric area. Clinal patterns in allele frequencies suggest C. tiutheri were introduced in an upper reaches of the Dongjin and downstream dispersal of the introduced alleles followed. There is little linkasedisequilibrium between the diagnostic loci, suggesting the nuclear genomes of tech two subspecies are randomly associated. The evidence presented here and previously supports recognition of C. t. striata and C. t. lutheri as the typical subspecies.

• The Journal of the Korean Society for Microbiology
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• v.34 no.5
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• pp.491-500
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• 1999

A recent study showed that comparative sequence analysis of rpoB DNAs could reveal natural relationships in genus Mycobacterium [J Clin Microbial. 37 (6). 1999]. rpoB DNAs showed interspecies variation and intraspecies conservation. Based on these data, we developed polymerase chain reaction-single strand conformation polymorphism (PCR-SSCP) protocols which enable species differentiation in genus Mycobacterium. When this assay was applied to 24 clinical isolates identified as M. avium complex (MAC) by biochemical test, these were successfully differentiated into M. avium and M. intracellulare. These results were concordant with those obtained by 16s rDNA analysis. It is the first report that PCR-SSCP analysis of rpoB DNA could be used for species differentiation of MAC strains.

• Korean Journal of Plant Resources
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• v.8 no.3
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• pp.223-235
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• 1995

Comparative studies on external morphology and anatomical characters were conducted understand the interspecific relationships and possibly to identify the position of Hanabusaya asiatica as an endemic genus among 4 genera and 9 species in H. asiatica and its allied groups. Such morphological characteristics as root shape, leaf size, presence or absence of wings in petiole, corolla and calyx shape, and inflorescence and stigma shape were useful qualitative characters. The morphology of stem, peduncle, calyx lobe, leaf, petiole, and ovary were also good characters to be included in this identification study. In the anatomical observations in these organs, projecting degree of epidermis and number of projecting area rather than cross-sectioned internal structures were found to be valuable index for the classification among species. External morphology and anatomical characters support the position of H. asiatica as an endemic genus very well. Known as the most important external characters to taxonomists(Fedorov, 1957: Nakai, 1952: Hong, 1983), leaf arrangement, inflorescence, and corolla shape were also preven to be very useful characters to identify the genera and species in the H. asiatica and its allied groups.

• Korean Journal of Plant Taxonomy
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• v.50 no.3
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• pp.253-261
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• 2020

Carex splendentissima U. Kang & J. M. Chung, endemic to the Korean peninsula, is characterized by staminate terminal spikes and glabrous elliptic perigynia. Based on its broad leaves, androgynous spikes, and tri-stigmatic features, the species has been placed in Carex sect. Siderostictae Franch. ex Ohwi, an East Asian section and a basal group in the genus. To clarify the monophyly and phylogenetic position of the species, a molecular study using the internal transcribed spacer region of nuclear ribosomal DNA and chloroplast DNA (trnL-F) data was conducted. The DNA sequence data of ten taxa in sect. Siderostictae and closely related taxa (two taxa in sect. Surculosae) with outgroups were analyzed based on maximum parsimony and maximum likelihood (ML) criteria. In the analyses, C. splendentissima was monophyletic and placed within the Siderostictae clade (sect. Siderostictae + two species of sect. Surculosae), forming a clade with C. ciliatomarginata and C. pachygyna (endemic to Japan). The clade (C. splendentissima + C. ciliatomarginata + C. pachygyna) shows evidence of diploidy. Furthermore, C. splendentissima is a sister to C. ciliatomarginata in the ML tree, and the two taxa have staminate terminal spikes. This study also updates the distribution of C. splendentissima and provides keys to the four Korean taxa in sect. Siderostictae. To conserve the endemic species C. splendentissima, further research on its genetic and ecological features should be conducted at the population level.

• Fisheries and Aquatic Sciences
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• v.25 no.12
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• pp.601-618
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• 2022

The genus Semisulcospira is an economically and ecologically valuable freshwater resource. Among the species, Semisulcospira coreana, Semisulcospira forticosta and Semisulcospira tegulata are endemic to the Korean peninsula and Semisulcospira gottschei is widespread in Asia. Therefore, maintenance and conservation of wild populations of these snails are important. We investigated the genetic diversity and population structure of Semisulcospira based on the mitochondrial cytochrome c oxidase subunit I (COI), NADH dehydrogenase subunit 4 (ND4), and combined mitochondrial DNA (COI + ND4) sequences. All four species and various genetic makers showed a high level of haplotype diversity and a low level of nucleotide diversity. In addition, Fu's Fs and Tajima's D neutrality tests were performed to assess the variation in size among populations. Neutrality tests of the four species yielded negative Fu's Fs and Tajima's D values, except for populations with one haplotype. The minimum spanning network indicated a common haplotype for populations of S. coreana, S. tegulata and S. gottschei, whereas S. forticosta had a rare haplotype. Also, genetic differences and gene flows between populations were assessed by analysis of molecular variance and using the pairwise fixation index. Our findings provided insight into the degree of preservation of the species' genetic diversity and could be utilized to enhance the management of endemic species.

• Korean Journal of Plant Resources
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• v.20 no.5
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• pp.424-436
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• 2007

In this paper, it was discussed situations and necessities of conservation management strategy for the woody plants resources in Jeju Island. Out of 320 taxa of the woody plants distributed in Jeju, there were 62 families, 136 genus, 279 species, 28 varieties and 13 forma. Conifers, gymnosperms, were 3 families, 5 genus and 7 species as holding 2.2% of total woody plants. Broad leaves, angiosperms, were 59 families, 131 genus, 272 species, 28 varieties and 13 forma that were 313 taxa. Evergreens were 84 taxa consisting of 31 families, 45 genus, 72 species, 7 varieties and 5 forma that make up 26.8% out of total angiosperms. Deciduous were 229 taxa(73.2%) consisting of 42 families, 93 genus, 200 species, 21 varieties and 8 forma that were 122 trees(38.1%), 177 shrubs(55.1%) and 21 vine plants(6.8%). Life form spectra by dormancy, disseminule, radicoid and growth form were analysed. Thirty eight taxa including 17 families, 21 genus, 14 species and 16 varieties out of 320 taxa growing Jeju were endemic to Korea and 22 taxa of them were endemic to Jeju. The specific plant species among the woody plants in Jeju were 10 taxa in V grade, 24 taxa in IV grade and 53 taxa in III grade. These are correspondence to those of nations as 12% of V grade, 7.6% of IV grade and 17.2% of III grade.

• Korean Journal of Medicinal Crop Science
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• v.18 no.6
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• pp.379-388
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• 2010

Adenophora racemosa is recently reported as a new Korean endemic plant species. However, the phylogenetic relationship of this genus has been controversial due to the morphological similarity and frequent morphological change of aerial parts. To verify the phylogenetic position of Adenophora racemosa and phylogenetic relationship of genus Adenophora, we analyzed the internal transcribed spacer (ITS) sequence of nuclear ribosomal DNA (nrDNA) and random amplified polymorphic DNA (RAPD) using 21 individual of 6 Adenophora species, A. verticillata, A. divaricata, A. racemosa, A. remotiflora, A. stricata and A. tetraphylla. In comparative analysis of the nrDNA-ITS sequences, we could not found not only any species specific nucleotide sequence but also could not estimated their inter or intra species. In the phylogenic analysis based on the RAPD derived DNA polymorphism, Adenophora species were classified into four groups by clustering analysis of the UPGMA. These results suggest that the DNA fingerprinting based on RAPD is more suitable than nrDNA-ITS sequence for the phylogenetic analysis of Adenophora species.

• Animal Systematics, Evolution and Diversity
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• v.33 no.2
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• pp.136-139
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• 2017

The genus Iksookimia (Actinopterygii: Cypriniformes: Cobitidae) is a bottom-dwelling freshwater loaches, which are well-known as their endemism and high geographic variation. However, population genetic relationships among Iksookimia spp. have remained unclear due to a shortage of genetic markers that can be applied generally in the genus. Here, we developed high-resolving microsatellite markers using I. koreensis and I. longicorpa as representatives of Iksookimia species because of their wide distribution range and phylogenetic position. Ten of polymorphic microsatellite loci were isolated from Iksookimia koreensis and were successfully cross-amplified in I. longicorpa. The mean number of observed alleles per locus was about 10.4 (range, 2-17) for I. koreensis and about 13.2 (range, 2-24) for I. longicorpa. The loci, IK03 and IK08, deviated from the Hardy-Weinberg equilibrium in I. koreensis, after applying the Bonferroni correction. The microsatellite markers obtained in the present study will be useful to evaluate population genetic structure and to establish conservation strategies for I. koreensis and related Iksookimia species.

• Korean Journal of Plant Taxonomy
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• v.48 no.1
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• pp.1-8
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• 2018

Mankyua chejuense is the only member of the monotypic genus Mankyua (Ophioglossaceae) and is endemic to Jejudo Island, Korea. To determine the precise phylogenetic position of M. chejuense, two cpDNA regions of 42 accessions representing major members of lycophytes are obtained from GenBank and analyzed using three phylogenetic analyses (maximum parsimony, maximum likelihood, and Bayesian inference). In addition, the divergence time is estimated based on a relaxed molecular clock using four fossil calibration points. The phylogenetic position of Mankyua still appears to be uncertain, representing either the earliest diverged lineage within Ophioglossaceae or a sister to the clade containing Ophioglossum and Helminthostachys. The most recent common ancestor of Ophioglossaceae and its sister lineage, Psilotum, was estimated to be 256 Ma, while the earliest divergence of Mankyua was estimated to be 195 Ma in the early Jurassic.