• Title/Summary/Keyword: Karyotype analysis

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A Comparative Karyotype Study in Korean Squirrels. I Karyotype Analysis of Sciunis vulgaris coreae and Tamlas sibiricus asiaticus by Conventional Giemsa Staining and C-Banding Method (한국산 다람쥐 핵형의 비교연구 I.일반염색과 C-Banding방법에 의한 한국산 청서(Sciurus vulgaris corea) 와 다람쥐(Tamias sibiricus asiaticus)의 핵형 분석)

  • 김종봉;이희영
    • The Korean Journal of Zoology
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    • v.33 no.2
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    • pp.222-230
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    • 1990
  • The karyotypes of Korean Sciunis vulgaris coreas and Tamias sibiricus asiaticus were analyzed by conventional Giemsa staining and C-banding method. The diploid chromosome number (2n) of Sciunis vulgaris coreae 40 consisting of 6 metacentric, 8 submetacentric, 3 subtelocentric and 2 telocentric autosome pairs, submetacentric X and acrocentric or subtelocentric Y chromosome. The arm number (NF) of this species was obtained as 72, excluding the gonosomal arms. Tamias sibiricus asiaticus has a 2n of 38. The karyotype was represented by 3 metacentric, 4 submetacentric, 5 subtelocentric and 6 telocentric autosome paits and 2 sex chromosome. The X chromosome was submetacentric chromosome and the Y was the smallest chromosome with a median. The NF was 60. In S. vulgaris coreae constitutive heterochromatins were observed at the centromeres and telomeres. Constitutive heterochnomatins of T sibiricus asiaticus were primarily observed at the centromeres. These results suggested that non-Robensonian reanagenents and distribution of constitutive heterochromatin played an imporiant role in karyological differentiation of these species.

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Speciation Mode Reconstruction for Lepilemur six species (L. mustelinus, L. edwardsi, L. dorsalis, L. leucopus, L. ruficaudatus, L. septentrionalis) Based on the Lepilemur Karyotype Analysis (여우원숭이속(Lepilemuridae)의 핵형 분석을 통해 나타난 Lepilemur 6종(L. mustelinus, L. edwardsi, L. dorsalis, L. leucopus, L. ruficaudatus, L. septentrionalis)의 종 분화 양상)

  • 정기윤
    • Journal of the Korea Academia-Industrial cooperation Society
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    • v.5 no.2
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    • pp.141-149
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    • 2004
  • The aim of this study was to test the validity of the hypothesis that the karyotypes of four species of Lepilemuridae were formed spontaneously from their ancestral hybrid karyotype. Hypothetical ancestral haploid Karyotype of Lepilemuridae is composed of 18 autosomes and X chromosomes. Lepilemur mustelinus karyotype has four tandem fused chromosomes and one Robertsonian translocated chromosome pairs. Lepilemur septentrionalis septentrionalis karyotype has only two pairs of translocated chromosomes. We reconstruct and suggest ancestral karyotype of LMU(ancLMU) and LSS(ancLSS), from which all four studied species were derived. Hybrids of ancLMU and ancLSS were formed and produce differently fused equilibrated gametes via circular form arrangement during gametogenesis. Five unit of trivalent homologous chromosome pairs were engaged in a circular form to give new gamete corresponding to the karyotype of L. dorsalis, orientation of one unit of trivalent was inversed in the circle to gave new gamete corresponding to the karyotype of L. leucopus. Seven homologous chromosome pairs were engaged in circular form to give haploid karyotype of Lepilemur ruficaudatus. Only one homologous chromosome pair is dissociated and the other chromosome pairs rearranged in the circle to form haploid karyotype of Lepilemur edwardsi. The new gametes could be produced from these circular forms. When the new gamete fertilized with the same type of gamete, The new homozygote is produced as existing L. dorsalis, L. leucopus, L. edwardsi and L. ruficaudatus. These results support the theory that new species could be formed in hybrid population through activated chromosome fusion, chromosome rearrangement in circular from at zygotene stage and production of equilibrated gametes to form homozygote new species.

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Karyotypic Analysis of Chicken Grunt, Parapristipoma trilimeatum, Small Yellow Croaker, Larimichthys polyactis, and Brown Croaker, Miichthys miiuy

  • Park, In-Seok;Gil, Hyun Woo
    • Development and Reproduction
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    • v.23 no.1
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    • pp.73-78
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    • 2019
  • To clarify the cytogenetic features of the chicken grunt, Parapristipoma trilineatum, small yellow croaker, Larimichthys polyactis, and brown croaker, Miichthys miiuy, in Jeju, Korea, karyotype analysis was performed. The karyotype of chicken grunt and brown croaker consists of 24 pairs of telocentrics [2n=48, fundamental number (FN)=48], and small yellow croaker consists of 3 pairs of submetacentrics and 21 pairs of telocentrics (2n=48, FN=54). No evidence of polymorphism, including aneuploidy or sex-related heteromorphic chromosomes, was found in any specimens examined in this study.

Study on chromosomes survey of Korea native dogs (국내 토종개의 염색체 조사에 관한 연구)

  • Park, Chang-Eun
    • Korean Journal of Veterinary Service
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    • v.34 no.3
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    • pp.291-296
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    • 2011
  • The karyotype of the domestic dog is widely accepted as one of the difficult mammalian karyotypes to work. In contrast to many other animals, knowledge about the canine karyotype is quite sparse. The dog has a total of 78 chromosomes; all 76 autosomes are acrocentric in morphology and show only a gradual decrease in length. But appear to be quite small and difficult to identify unambiguously. To purchased standardization of chromosome in Korea native dog, there were analyzed by conventional trypsin/Giemsa staining (GTG-banding techniques), and were compared with 4, 6, 8, 11, 13, 17 chromosome. There were no variations in karyotypes which were analyzed by conventional GTG-banding techniques, but differences were observed in G-banding patterns with Sapsaree, Jindo, Gyeongju DongGyeong dogs, Welshi-Corgi. It is not clear that these disagreements in G-banding patterns between strains of dog were caused by chromosome polymorphism or a difference in interpretation. Comparative analysis of the distribution patterns of conserved segments defined by dog paints in the genomes of the Korea native dogs demonstrates that their differences in the karyotypes of these three species could have resulted from acrocentric banding patterns.

Karyotypes of Five species in Odontobutidae and Cottidae of Korea (한국산 동사리과 (Odontobutidae)와 둑중개과 (Cottidae) 5종의 핵형)

  • Park, Gab Man;Song, Ho Bok
    • Korean Journal of Ichthyology
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    • v.18 no.3
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    • pp.155-162
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    • 2006
  • The chromosome numbers of five species in two families of Korea are investigated: Odontobutis platycephala, O. interrupta, and O. obscura in Odontobutidae, and Cottus koreanus and C. hangiongensis in Cottidae. In Odontobutis species, the three species showed the diploid chromosome number, 2n=44 (NF=44) telocentric chromosomes. In Cottus species, the mitotic chromosomes from 24 groups with two chromosomes each indicated that it is a diploid. The karyotype of C. koreanus and C. hangiongensis is 2n=48 and NF=52. These species is the first report on the chromosomes and the karyotype analysis except O. platycephala. Our findings provide cytotaxonomic evidence for the species distinctness of these five species whose descriptions were based primarily on external morphology.

Evaluation of using veliger stage larvae for the preparation of metaphase spreads from the pacific abalone (Haliotis discus hannai)

  • Choi, Jae Hoon;Kim, Eun Jeong;Park, Choul-Ji;Nam, Yoon Kwon;Gong, Seung Pyo
    • Journal of Animal Reproduction and Biotechnology
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    • v.35 no.3
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    • pp.223-231
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    • 2020
  • Karyotype analysis is a major work in the process of triploid abalone production for the purpose of productivity and quality improvement. However, the metaphase spreads for karyotype analysis have been prepared just from the larvae at trochophore stage, which has restricted the spectrum of sample correction inhibiting more efficient analysis. Here, we investigated the feasibility of preparing metaphase spreads from the larvae at veliger stage that is the next developmental stage of trochophore. For this, diploid and triploid larvae at trochophore and veliger stages from Pacific abalone (Haliotis discus hannai) were subjected to metaphase spread preparation and its efficiencies were measured and compared each other. As the results, although the efficiencies of metaphase spread preparation were significantly lower in the larvae at veliger stage compared to the ones at trochophore stage regardless of ploidy status, we found that the preparation of metaphase spreads, which showed the clear chromosomal images containing the normal number of chromosomes, was possible from the veliger stage larvae. On the other hands, all larvae used in this study regardless of developmental stage and ploidy did not show colchicine sensitivity. Moreover, no significant difference was observed in cell cycle distribution of the cells comprising larvae between two developmental stages regardless of ploidy status. These suggested that the details of protocol to prepare metaphase spreads from abalone larvae should be optimized depending on its developmental stages. Taken together, we demonstrated the feasibility of preparing metaphase spreads from H. discus hannai veliger stage larvae for karyotype analysis.

Karyotype Classification of Chromosome Using the Hierarchical Neu (계층형 신경회로망을 이용한 염색체 핵형 분류)

  • Chang, Yong-Hoon;Lee, Young-Jin;Lee, Kwon-Soon
    • Proceedings of the KIEE Conference
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    • 1998.07b
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    • pp.555-559
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    • 1998
  • The human chromosome analysis is widely used to diagnose genetic disease and various congenital anomalies. Many researches on automated chromosome karyotype analysis have been carried out, some of which produced commercial systems. However, there still remains much room for improving the accuracy of chromosome classification. In this paper, We proposed an optimal pattern classifier by neural network to improve the accuracy of chromosome classification. The proposed pattern classifier was built up of two-step multi-layer neural network(TMANN). We reconstructed chromosome image to improve the chromosome classification accuracy and extracted four morphological features parameters such as centromeric index (C.I.), relative length ratio(R.L.), relative area ratio(R.A.) and chromosome length(C.L.). These Parameters employed as input in neural network by preprocessing twenty human chromosome images. The experiment results shown that the chromosome classification error was reduced much more than that of the other classification methods.

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Prenatal chromosomal microarray analysis of fetus with increased nuchal translucency

  • Shim, So Hyun;Cha, Dong Hyun
    • Journal of Genetic Medicine
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    • v.15 no.2
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    • pp.49-54
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    • 2018
  • Nuchal translucency is an important indicator of an aneuploid fetus in prenatal diagnostics. Previously, only the presence of aneuploid could be confirmed by conventional karyotyping of fetuses with thick nuchal translucency. With the development of genetic diagnostic techniques, however, it has been reported that subtle variations not detectable by conventional karyo-typing might occur in cases of pathologic clinical syndrome in euploid fetuses. One of the newer, high-resolution genetic methods in the prenatal setting is chromosomal microarray. The possible association between nuchal translucency thickness with normal karyotype and submicroscopic chromosomal abnormalities detectable by microarray has been studied. How and when to apply microarray in clinical practice, however, is still debated. This article reviews the current studies on the clinical application of microarray in cases of increased nuchal translucency with normal karyotype for prenatal diagnosis.

Early Survival and Karyotype of Backcross Bullhead Hybrid between Pseudobagrus fulvidraco Female and P. fulvidraco $\times$ Leiocassis ussuriensis Hybrid Male (동자개 Pseudobagrus fulvidraco 암컷과 동자개 P. fulvidraco $\times$ 대농갱이 Leiocassis ussuriensis 잡종 수컷간 역교배체의 초기 생존을 및 염색체 핵형)

  • Park, Sang-Yong;Kang, Eun-Jong;Nam, Yoon-Kwon;Bang, In-Chul
    • Journal of Aquaculture
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    • v.22 no.1
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    • pp.74-78
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    • 2009
  • Backcross hybridization between Korean bullhead Pseudobagrus fulvidraco female and Korean bullhead P. fulvidraco $\times$ Ussurian bullhead Leiocassis ussuriensis hybrid male was performed, and early viability and karyotype of the backcross hybrids were examined along with their parental species. Mean fertilization rate (86.8%), hatching success (70.7%) and early survival rate (76.4%) of backcross hybrids were similar with those found in the maternal species, the Korean bullhead. From the chromosome analysis, modal chromosome numbers of Korean bullhead, Ussurian bullhead, their hybrid and backcross hybrid were the same as 2n = 52. However, their karyotypes were different among genotypes. The karyotype of backcross hybrid was 22 metacentric + 18 submetacentacentric + 12 acrocentric chromosomes.