• Title/Summary/Keyword: KOREAN ENDEMIC SPECIES

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A report of the second chloroplast genome sequence in Veronica nakaiana (Plantaginaceae), an endemic species in Korea

  • LEE, Yae-Eun;LEE, Yoonkyung;KIM, Sangtae
    • Korean Journal of Plant Taxonomy
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    • v.51 no.1
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    • pp.109-114
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    • 2021
  • Veronica nakaiana Ohwi (Plantaginaceae) is an endemic taxon on Ulleungdo Island, Korea. We report the second complete chloroplast genome sequence of V. nakaiana. Its genome size is 152,319 bp in length, comprising a large single-copy of 83,195 bp, a small single-copy of 17,702 bp, and a pair of inverted repeat regions of 25,711 bp. The complete genome contains 115 genes, including 51 protein-coding genes, four rRNA genes, and 31 tRNA genes. When comparing the two chloroplast genomes of V. nakaiana, 11 variable sites are recognized: seven SNPs and four indels. Two substitutions in the coding regions are recognized: rpoC2 (synonymous substitution) and rpl22 (nonsynonymous substitution). In nine noncoding regions, one is in the tRNA gene (trnK-UUU), one is in the intron of atpF, and seven are in the intergenic spacers (trnH-GUG~psbA, trnK-UUU, rps16~trnQ-UUG, trnC-GCA~petN, psbZ~trnG-GCC, ycf3~trnS-GGA, ycf4~cemA, and psbB~psbT). The data provide the level of genetic variation in V. nakaiana. This result will be a useful resource to formulate conservation strategies for V. nakaiana, which is a rare endemic species in Korea.

Zoogeographic Analysis on the Subfamily Tryphoninae (Hymenoptera:Ichneumonidae) (뭉툭맵시벌아과(벌목:맵시벌과)의 동물지리학적 분석)

  • 차진열;이종욱;권용정
    • Korean journal of applied entomology
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    • v.38 no.1
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    • pp.1-10
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    • 1999
  • According to zoogeographic analysis, distribution types of Korean species of the subfamily Tryphoninae are as follows; Holarctic species (9.6%), Transpalearctic (38.4%), Transpalearctic-Oriental (8.2%), Eastern Palearctic (Trans-Far East Asia)-Oriental (4.1 %), Eastern Palearctic (17.8%) and Endemic (21.9%). Because of large numbers of palearctic and endemic species, we believe that the Korean Tryphoninae may have originated from northern hemisphere. The oldest fossil species of the Tryphoninae are the Catachoru rninor Townes and Urotryphon pusillus Townes in Creataceous amber from the peninsula Taimyr, Siberia. The world-wide distribution of the Tryphoninae appears to coincide with the continental movement.

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The Fish community of the Ungchon Stream Around the New Dam Intended Area (댐예정지를 중심으로 한 웅천천 수계의 어류군집에 관하여)

  • Hong, Young-Pyo;Jang, Min-Ho;Kang, Ho;Choi, Sin-Seok
    • Korean Journal of Environmental Biology
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    • v.17 no.1
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    • pp.79-88
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    • 1999
  • The fish fauna, notified species, and fish community was studied at the six stations in a 18km section of the Ungchon stream, a mountain stream in Korea, where a new dam is planned from 1994 to 1996. Twentynine species (11 families, 25 genera) were found. Nine species were endemic to Korea. The Dominant specie in the studied area were Zacco temmincki, Z. platypus and Squalidus gracilis majimae. Some of the korean endemic species (Coreoperca herzi) including the Korean endangered species such as Pseudopungtudgia nigra and Liobagrus obesus were not found in this stream anymore. The average of area density was 0.69 individuals per square meter and the volume density was 1.45 individuals per cubic meter. Species diversity was highest in the middle region. According to community correlation coefficients of six stations, similality coefficients of station one, four, five and six were higher than others, but no significant difference in the composition of fish fauna was found between six study staions.

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Prionolabis crane flies (Diptera: Limoniidae) of Korea

  • Podenas, Sigitas;Park, Sun-Jae;Byun, Hye-Woo;Aukstikalniene, Rasa
    • Journal of Species Research
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    • v.11 no.1
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    • pp.29-37
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    • 2022
  • This study is based on crane fly specimens collected more than 80 years ago in 1938-1939 and preserved at the United States National Museum, Smithsonian Institution, Washington DC, USA. Despite many attempts with a variety of methods, no additional specimens of this genus were captured. This likely means that that this genus is extinct on the Korean Peninsula, or its distribution is restricted to the northern areas of the Democratic People's Republic of Korea (North Korea). The genus Prionolabis Osten Sacken, 1860 with four species, one of them Prionolabis dis(Alexander, 1950) endemic to North Korea, was recorded by Ch. P. Alexander (Alexander, 1938, 1940, 1950). All succeeding papers listing these species were based on these original works without study based on actual specimens. For each species, we present general information on genus, redescriptions of species based on Korean specimens, illustrations of important taxonomical structures, elevation range, period of activity, habitat information, general distribution, and a distribution map for the Korean Peninsula.

Identification of Mycobacterium avium complex (MAC) Clinical Strains to a Species Level by Sequencing and PCR-SSCP Analysis of rpoB DNA (비결핵항산성균의 rpoB DNA 염기서열과 SSCP pattern 분석에 따른 Mycobacterium avium complex (MAC) 임상분리균주의 동정)

  • Kim, Bum-Joon;Lee, Seung-Hyun;Lee, Kuen-Hwa;Park, Chung-Kyu;Choi, Myung-Sik;Kim, Ik-Sang;Choi, Sung-Bai;Hwang, Eung-Su;Cha, Chang-Yong;Kim, Sang-Jae;Bai, Gill-Han;Kook, Yoon-Hoh
    • The Journal of the Korean Society for Microbiology
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    • v.34 no.5
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    • pp.491-500
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    • 1999
  • A recent study showed that comparative sequence analysis of rpoB DNAs could reveal natural relationships in genus Mycobacterium [J Clin Microbial. 37 (6). 1999]. rpoB DNAs showed interspecies variation and intraspecies conservation. Based on these data, we developed polymerase chain reaction-single strand conformation polymorphism (PCR-SSCP) protocols which enable species differentiation in genus Mycobacterium. When this assay was applied to 24 clinical isolates identified as M. avium complex (MAC) by biochemical test, these were successfully differentiated into M. avium and M. intracellulare. These results were concordant with those obtained by 16s rDNA analysis. It is the first report that PCR-SSCP analysis of rpoB DNA could be used for species differentiation of MAC strains.

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Vascular Plant Diversity of Jeju Island, Korea

  • Kim, Chan-Soo
    • Korean Journal of Plant Resources
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    • v.22 no.6
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    • pp.558-570
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    • 2009
  • The vascular plants in Jeju composed of 21 families 62 genera, 190 species, 7 varieties with 197 taxa in Pteridophyta, 3 families 5 genera, 7 species, 3 forma with 10 taxa in gymnosperm (Coniferophyta) and 143 families 703 genera, 1,622 species, 114 varieties and 47 forma with 1,783 taxa in Endospermae. The total number of taxa was 1,990 consisting 167 families, 770 genera, 1,818 species, 121 varieties and 50 forma. Three families, 4 genera 4 species and 1 variety in Pteridophyta and 1 family, 1 genus I species, 1 forma of Coniferophyta were endemic to Jeju. Five families, 8 genera and 8 species in the Monocotyledonae of Endospermae and 23 families, 32 genera, 21 species, 16 varieties and 7 forma and 44 taxa in Cholipetalae, and 9 families, 24 genera, 12 species, 13 varieties and 7 forma, total 32 taxa in Sympetalae were endemic to Jeju. Total 90 taxa with 41 families, 69 genera, 46 species, 29 varieties and 15 forma were drawn up as endemic plants in Jeju. As the numbers show on, Jeju has more biodiversity especially plant diversity than any other places in Korea. It was an important region in regard to geographical position. The rarity on plants from Jeju has been assessed based on the IUCN red list categories and criteria at both regional and global levels. There was one species in each extinct (EX) and extinct in the Wild (EW). The EX and EW species were Rhododendron saisiuense Nakai (Ericaceae) and Asplenium antiquum Makino (Aspleniaceae), respectively. Three taxa, Rhododendron dauricum L. (Ericaceae), Lycopodium sieboldii Miq., and Lycopodiella cernua (L.) Serm (Lycopodiaceae) were species that is extinct in the region (RE). Sixty-one taxa were critically endangered (CR), 13 were endangered (EN), and 83 were vulnerable (VU) at regional level. The taxa listed on a Red List corresponds 26.9% of total taxa in Jeju. At global level, there were 19 taxa in CR, 4 in EN, and 1 in VU (Vulnerable) as the category of threat. The rest taxa (133 taxa) were classified as Least Concern (LC). According to the results of the assessment, conservation measures must be taken for total of 157 species that were categorized in threaten including one of EX, one of EW and three extinct in the region immediately. Of 157 species, 61 were CR, 13 are EN and 83 were VU.

An inventory of Korean living collections in the Arnold Arboretum of Harvard University, USA

  • Lee, Sang Jun;Kim, Jung-Hyun;Nam, Gi-Heum;Kim, Min-Ha;Lim, Chae Eun
    • Journal of Species Research
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    • v.3 no.2
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    • pp.183-194
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    • 2014
  • As part of a study to understand the current status of Korean plant species propagated in foreign countries, we conducted extensive surveys on Korean living collections in the Arnold Arboretum of Harvard University, the oldest public arboretum in North America. Specifically, we collected and identified the voucher specimens of the living collections and further examined the collection databases to understand the history of how Korean plants were introduced to the Arboretum. We found that a total of 154 Korean taxa (belonging to 49 families and 81 genera) have been planted in the arboretum. Most plants originated from seeds that were directly collected in Korea or obtained via seed exchanges with botanical gardens in Asia, Europe, and U.S.A. Of the 154 taxa, 16 are Korean endemic species, and three are listed as endangered species. In addition, 62 taxa are as floristic regional indicator species of Korea used by the Ministry of Environment.

Saussurea albifolia M. J. Nam & H. T. Im (Compositae), a new species from the Baekdudaegan Area, Korea

  • Sun, Eun-Mi;Yun, Seon A;Kim, Seung-Chul;Chung, Gyu-Young;Nam, Myoung-Ja;Im, Hyoung-Tak
    • Journal of Species Research
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    • v.10 no.2
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    • pp.159-163
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    • 2021
  • Saussurea albifolia, a new species, is reported from the Baekdudaegan Mountains. It has distinctive morphological characteristics that distinguish it from other congeneric species of Saussurea in Korea; radical leaves persist or withered till flowering, white tomentose leaf beneath, campanulate involucre with brown-cobwebby hairs, and dark purplish phyllaries with acuminate tips. Saussurea albifolia is a new, endemic species, narrowly restricted to the Korean Peninsula as a consequence of adaptation to alpine or subalpine environments of the Baekdudaegan Area. Among the Korean species of Saussurea, S. gracilis Maxim., S. insularis Kitam., and S. seoulensis Nakai are morphologically similar to S. albifolia by having leaves with white hairs beneath and persistent radical leaves during blooming period. It has been well understood that Saussurea is one of the highly diversified and adaptable groups in Asteraceae and also that the currently recognized species in Korea likely significant underestimates its diversity on the Korean Peninsula.

Prevalence of Gymnophalloides seoi infection in coastal villages of Haenam-gun and Yeongam-gun, Republic of Korea

  • GUK Sang-Mee;PARK Jae-Hwan;SHIN Eun-Hee;KIM Jae-Lip;LIN Aifen;CHAI Jong-Yil
    • Parasites, Hosts and Diseases
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    • v.44 no.1 s.137
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    • pp.1-5
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    • 2006
  • One coastal village in Haenam-gun and two in Yeongam-gun, Jeollanam-do were surveyed for intestinal parasite infections by fecal examination. The egg positive rates of Gymnophalloides seoi were high, $24.1\%$ (14/58) in Haenam-gun and $9.3\%$ (11/118) in Yeongam-gun. The egg positive rates of heterophyids, including Heterophyes nocens, and of Clonorchis sinensis were $10.3\%\;and\;6.9\%$ in Haenam-gun, and $14.4\%\;and\;8.5\%$ in Yeongam-gun, respectively. After praziquantel treatment and purgation, a total of 37,761 fluke specimens were recovered from 17 patients; 11 in Haenam-gun and 6 in Yeongam-gun. Gymnophalloides seoi was the most commonly recovered species, with 37,489 specimens in total (2,205 per person). Other recovered flukes included Heterophyes nocens, Stictodora fuscata, Heterophyopsis continua, Pygidiopsis sUmma, and undetermined species. These results indicate that the areas surveyed are new endemic foci of G. seoi.

Monographic Study of the Endemic Plants in Korea VI. Taxonomy and Intespecific Relationships of the Genus Deutzia (한국 고유식물의 종속지 VI. 말발도리속 식물의 분류와 종간 유연관계)

  • 정영호
    • Journal of Plant Biology
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    • v.29 no.3
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    • pp.207-231
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    • 1986
  • To clarify the species of genus Deutzia (Saxifragaceae, s. l.) in Korea, the taxonomic description was undertaken and interspecific relationships was discussed based on the external morphology with the light and scanning electron microscopes and the distributional pattern with specimens deposited in the herbaria. The presence or absence, number of rays, position and frequency of the stellate trichome, inflorescence and the morphology and venation pattern of petal were approved as the good characters to classify the Korean Deutzias. Although 17 kinds of Deutzia were reported in Korea hitherto, 9 kinds were excluded owing to the taxonomic treatment based on the comparative external morphology and the distributional uncertainty. Thus genus Deutzia in Korea could be rearranged as 2 sections, 3 subsection, 7 species and 1 variety. Among them, 4 species were considered as the endemic species in Korea.

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