• Title/Summary/Keyword: Intramolecular hydrogen bond

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Local Structure Study of Liquid Phase Ethylene Glycol and 1,3-propanediol through Density Functional Theory

  • Nam, Seungsoo;Sim, Eunji
    • Proceeding of EDISON Challenge
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    • 2016.03a
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    • pp.140-146
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    • 2016
  • Using density functional Theory, we studied local structure of liquid ethylene glycol and 1,3-propanediol. For both liquid, making intramolecular hydrogen bonding is not preferred, because relative energy between with and without intramolecular hydrogen bond is only -1.95kcal/mol, which is far less than intermolecular hydrogen bonding energy, about -7.5kcal/mol. Also, hydrogen bond induce polarization of hydroxyl group and make $2^{nd}$ hydrogen bond more stronger. This effect was small in intramolecular hydrogen bond of ethylene glycol. When considering energy per hydrogen bond, making only one intermolecular hydrogen bond for ethylene glycol pair is energetically favored, while two intermolecular hydrogen bond can be formed in 1,3-propanediol pair.

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Ab initio Calculations of Protonated Ethylenediamine-(water)3 Complex: Roles of Intramolecular Hydrogen Bonding and Hydrogen Bond Cooperativity

  • Bu, Du Wan
    • Bulletin of the Korean Chemical Society
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    • v.22 no.7
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    • pp.693-698
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    • 2001
  • Ab initio density functional calculations on the structural isomers, the hydration energies, and the hydrogen bond many-body interactions for gauche-, trans-protonated ethylenediamine-(water)3 complexes (g-enH+(H2O)3, t-enH+(H2O)3) have been performed. The structures and relative stabilities of three representative isomers (cyclic, tripod, open) between g-enH+(H2O)3 and t-enH+(H2O)3 are predicted to be quite different due to the strong interference between intramolecular hydrogen bonding and water hydrogen bond networks in g-enH+(H2O)3. Many-body analyses revealed that the combined repulsive relaxation energy and repulsive nonadditive interactions for the mono-cyclic tripod isomer, not the hydrogen bond cooperativity, are mainly responsible for the greater stability of the bi-cyclic isomer.

Interplay of the Intramolecular Water Vibrations and Hydrogen Bond in N-Methylacetamide-Water Complexes: Ab Initio Calculation Studies

  • Kim, Joo-Hee;Cho, Min-Haeng
    • Bulletin of the Korean Chemical Society
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    • v.24 no.8
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    • pp.1061-1068
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    • 2003
  • The correlation between the water and N-methylacetamide (NMA) intramolecular vibrational frequencies and the hydrogen-bond length in a variety of NMA-H₂O and NMA-D₂O complexes was investigated by carrying out ab initio calculations. As the hydrogen-bond length decreases, the frequencies of bending and stretching modes of the hydrogen-bonding water increases and decreases, respectively, and the amide I and II (III) mode frequencies of the NMA decreases and increases, respectively. In this paper, correlation maps among the amide (I, II, and III) modes of NMA and three intramolecular water modes are thus established, which in turn can be used as guidelines for interpreting two-dimensional vibrational spectra of aqueous NMA solutions.

Hydrogen Bonds in GlcNAc( β1,3)Gal( β)OMe in DMSO Studied by NMR Spectroscopy and Molecular Dynamics Simulations

  • Shim, Gyu-Chang;Shin, Jae-Min;Kim, Yang-Mee
    • Bulletin of the Korean Chemical Society
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    • v.25 no.2
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    • pp.198-202
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    • 2004
  • Hydrogen bond is an important factor in the structures of carbohydrates. Because of great strength, short range, and strong angular dependence, hydrogen bonding is an important factor stabilizing the structure of carbohydrate. In this study, conformational properties and the hydrogen bonds in GlcNAc( ${\beta}$1,3)Gal(${\beta}$)OMe in DMSO are investigated through NMR spectroscopy and molecular dynamics simulation. Lowest energy structure in the adiabatic energy map was utilized as an initial structure for the molecular dynamics simulations in DMSO. NOEs, temperature coefficients, SIMPLE NMR data, and molecular dynamics simulations proved that there is a strong intramolecular hydrogen bond between O7' and HO3' in GlcNAc( ${\beta}$1,3)Gal(${\beta}$)OMe in DMSO. In aqueous solution, water molecule makes intermolecular hydrogen bonds with the disaccharides and there was no intramolecular hydrogen bonds in water. Since DMSO molecule is too big to be inserted deep into GlcNAc(${\beta}$1,3)Gal(${\beta}$)OMe, DMSO can not make strong intermolecular hydrogen bonding with carbohydrate and increases the ability of O7' in GlcNAc(${\beta}$1,3)Gal(${\beta}$)OMe to participate in intramolecular hydrogen bonding. Molecular dynamics simulation in conjunction with NMR experiments proves to be efficient way to investigate the intramolecular hydrogen bonding existed in carbohydrate.

Evidences that β-Lactose Forms Hydrogen Bonds in DMSO

  • Ko, Hyun-Sook;Shim, Gyu-Chang;Kim, Yang-Mee
    • Bulletin of the Korean Chemical Society
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    • v.26 no.12
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    • pp.2001-2006
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    • 2005
  • Glycoproteins and glycolipids play key roles in intracellular reactions between cells and their environments at the membrane surface. For better understanding of the nature of these events, it is necessary to know threedimensional structures of those carbohydrates, involved in them. Since carbohydrates contain many hydroxyl groups which can serve both as hydrogen bond donors and acceptors, hydrogen bond is an important factor stabilizing the structure of carbohydrate. DMSO is an aprotic solvent frequently used for the study of carbohydrates because it gives detailed insight into the intramolecular hydrogen bond network. In this study, conformational properties and the hydrogen bonds in $\beta$-lactose in DMSO are investigated by NMR spectroscopy and molecular dynamics simulations. NOEs, temperature coefficients, deuterium isotope effect, and molecular dynamics simulations proved that there is a strong intramolecular hydrogen bond between O3 and HO2' in $\beta$-lactose and also OH3 in $\beta$-lactose may form an intermolecular hydrogen bond with DMSO.

Characterization of Anthraquinone-Based Electron Acceptors for Organic Solar Cells (유기태양전지용 안트라퀴논 기반 전자 받게 분자의 특성 분석)

  • Hyun, Chang-Seok;An, Byeong-Kwan
    • Journal of the Korean Institute of Electrical and Electronic Material Engineers
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    • v.35 no.4
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    • pp.366-371
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    • 2022
  • Recently many efforts have been made to develop a novel class of non-fullerene electron acceptor materials for high-performance organic solar cells. In this work, anthraquinone derivatives, TMAQ and THAQ, were prepared and their availability as electron acceptor materials for organic solar cells were investigated in terms of optical, thermal, electrochemical properties, and solar cell devices. Compared to TMAQ, a significant bathochromic shift of absorption band was observed for THAQ owing to intramolecular hydrogen-bond-assisted CT interactions. Thanks to the fused aromatic ring structure and benzoquinone unit, both TMAQ and THAQ exhibited a high thermal stability and an efficient electron reduction process. In particular, the intramolecular O-H---O=C hydrogen bond of THAQ plays an important role in improving the thermal stability and electron reduction properties. In the P3HT:acceptor solar cell system, THAQ-based devices had more than ca. 6 times higher power conversion efficiency than TMAQ -based devices. These results serve as a guide for developing high-efficient anthraquinone-based electron acceptor materials.

Excited-State Intramolecular Proton Transfer (ESIPT) Fluorescence in a Polymeric System

  • Park, Soo-Young
    • Proceedings of the Polymer Society of Korea Conference
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    • 2006.10a
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    • pp.35-36
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    • 2006
  • Excited-state intramolecular proton transfer (ESIPT) is a phototautomerization occurring in the excited states of the molecules possessing a cyclic intramolecular or solvent-bridged hydrogen bond. Recently, we have developed novel ESIPT chromophores, molecules, dendrimers and polymers which show very high fluorescence quantum efficiency combined with the characteristic features of optical switching, fluorescence patterining, lasing, and electroluminescence. Broad overview of these topics will be given in this talk.

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The Effect of Benzophenone Derivatives on the Shielding of Ultraviolet Rays and Light-fastness of the Dyed Fabrics (벤조페논 유도체의 자외선 차단 효과 및 염색물의 일광견뢰도에 미치는 영향)

  • 김종규;김태경;박태수;임용진
    • Textile Coloration and Finishing
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    • v.10 no.4
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    • pp.53-61
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    • 1998
  • The absorptions of ultraviolet rays of benzophenone derivatives were investigated in terms of the position of substituent, especially hydroxyl group. When the derivatives were added to the aqueous solution of Rhodamin B, which has very low light-fastness, all of them delayed the photofading of Rhodamin B solution. But on the fabrics, only the derivatives with the hydroxyl group at 2-position showed the good ability of ultraviolet rays absorption. The benzophenone derivatives absorb ultraviolet rays to form a hydrogen bond between hydroxyl group and carbonyl group, and return to their original structure by releasing heat energy. In solution, the derivatives can form a intermolecular hydrogen bond, and absorb the ultraviolet rays. But on the fabric, the intermolecular hydrogen bond is impossible, only hydroxyl group of 2-position forms a intramolecular hydrogen bond, and that makes the derivatives on the fabric absorb ultraviolet rays.

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