• Title/Summary/Keyword: Important species

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Mitochondrial DNA-based investigation of dead rorqual (Cetacea: Balaenopteridae) from the west coast of India

  • Shantanu Kundu;Manokaran Kamalakannan;Dhriti Banerjee;Flandrianto Sih Palimirmo;Arif Wibowo;Hyun-Woo Kim
    • Fisheries and Aquatic Sciences
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    • v.27 no.1
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    • pp.48-55
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    • 2024
  • The study assessed the utility of mitochondrial DNA for identifying a deceased rorqual discovered off the western coast of India. Both the COI and Cytb genes exhibited remarkable 99-100% similarity with the GenBank sequence of Balaenoptera musculus through a global BLAST search, confirming their affiliation with this species. Inter-species genetic distances for COI and Cytb genes ranged from 6.75% to 9.80% and 7.37% to 10.96% respectively, compared with other Balaenopteridae species. The Bayesian phylogenies constructed based on both COI and Cytb genes demonstrated clear and separate clustering for all Balaenopteridae species, further reaffirming their distinctiveness, while concurrently revealing a cohesive clustering pattern of the generated sequences within the B. musculus clade. Beyond species confirmation, this study provides valuable insights into the presence of live and deceased B. musculus individuals within Indian marine ecosystems. This information holds significant potential for guiding conservation efforts aimed at safeguarding Important Marine Mammal Areas (IMMAs) in India over the long term.

Relationship between the Birds.Mammals' Distribution and Forest area, Land cover (조류.포유류의 분포와 산림면적, 토지피복과의 관련성)

  • Lee, Dong-Kun;Kim, Bo-Mi;Song, Won-Kyong
    • Journal of Korean Society of Rural Planning
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    • v.15 no.2
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    • pp.19-26
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    • 2009
  • The purpose of this study is to build Island biogeography in the basic concept of landscape ecology in South Korea by draw relationship between the species side of quantitative habitats and forest area surveyed in the national database based on investigation of the 2nd natural environment. In addition, try to present criterion of habitats character category after understanding habitats character of emergence area side of quality habitats based on the type of formatting. Species and forest area relationship analyzed using correlation analysis and simple regression analysis. Also habitat character limited composition ratio of neighboring land cover and analyzed using hierarchical cluster analysis to classify type of habitat. As a result, we found that forest area is correlated with number of species, forests which is bigger than 100ha are more important of increase in species' population. And according to land cover composition ratio, bird's classified types of forest inner species, forest edge species, forest outer species and mammal's classified types of forest inner species, forest general species, forest edge species. We suggest that study of species-forest area relationship and emergence habitat character be used as some management plans of species' conservation, protection and restoration.

Altitudinal patterns and determinants of plant species richness on the Baekdudaegan Mountains, South Korea: common versus rare species

  • Lee, Chang-Bae;Chun, Jung-Hwa;Um, Tae-Won;Cho, Hyun-Je
    • Journal of Ecology and Environment
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    • v.36 no.3
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    • pp.193-204
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    • 2013
  • Altitudinal patterns of plant species richness and the effects of area, the mid-domain effect, climatic variables, net primary productivity and latitude on observed richness patterns along the ridge of the Baekdudaegan Mountains, South Korea were studied. Data were collected from 1,100 plots along a 200 to 1,900 m altitudinal gradient on the ridge. A total of 802 plant species from 97 families and 342 genera were recorded. Common and rare species accounted for 91% and 9%, respectively, of the total plant species. The altitudinal patterns of species richness for total, common and rare plants showed distinctly hump-shaped patterns, although the absolute altitudes of the richness peaks varied somewhat among plant groups. The mid-domain effect was the most powerful explanatory variable for total and common species richness, whereas climatic variables were better predictors for rare plant richness. No effect of latitude on species richness was observed. Our study suggests that the mid-domain effect is a better predictor for wide-ranging species such as common species, whereas climatic variables are more important factors for range-restricted species such as rare species. The mechanisms underlying these richness patterns may reflect fundamental differences in the biology and ecology of different plant groups.

Benthic Environment and Community Structure of Macrobenthos at the Tidal Flats in Chung-nam, Korea (충남 갯벌 저서환경과 대형저서동물의 군집 변화)

  • Kim, Jong-Chun;Ma, Chae-Woo;Jung, Yun-Hwan
    • Korean Journal of Fisheries and Aquatic Sciences
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    • v.48 no.1
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    • pp.104-115
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    • 2015
  • This study was conducted during April-June in 2008 and 2010, following the Taean Oil Spill. We measured year-to-year changes in benthos species abundances and composition in 16 intertidal zone regions of Chungcheongnam-do. In total, 154 species were found 2008 and 134 in 2010; the mean abundance per area was $403ind./m^2$ and $242ind./m^2$, respectively. In 2008, the 10 dominant species included four species of arthropods, three species of annelids, and three species of mollusks. In 2010, dominant species included five species of annelids, three species of mollusks, one species of arthropods, and one other species. We used bray-curtis similarity to group species and found two groups in 2008 and five in 2010, complementing our NMDS analysis. Finally, we tested correlations between abiotic and biotic factors, and implemented a BIO-ENV analysis, which showed that sediment type, MZ (Phi), and organic content are important environmental factors affecting benthos in the Chung-nam tidal flats.

Vegetation structure and distribution characteristics of Symplocos prunifolia, a rare evergreen broad-leaved tree in Korea

  • Kim, Yangji;Song, Kukman;Yim, Eunyoung;Seo, Yeonok;Choi, Hyungsoon;Choi, Byoungki
    • Journal of Ecology and Environment
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    • v.44 no.4
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    • pp.275-285
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    • 2020
  • Background: In Korea, Symplocos prunifolia Siebold. & Zucc. is only found on Jeju Island. Conservation of the species is difficult because little is known about its distribution and natural habitat. The lack of research and survey data on the characteristics of native vegetation and distribution of this species means that there is insufficient information to guide the management and conservation of this species and related vegetation. Therefore, this study aims to identify the distribution and vegetation associated with S. prunifolia. Results: As a result of field investigations, it was confirmed that the native S. prunifolia communities were distributed in 4 areas located on the southern side of Mt. Halla and within the evergreen broad-leaved forest zones. Furthermore, these evergreen broad-leaved forest zones are themselves located in the warm temperate zone which are distributed along the valley sides at elevations between 318 and 461 m. S. prunifolia was only found on the south side of Mt. Halla, and mainly on south-facing slopes; however, small communities were found to be growing on northwest-facing slopes. It has been confirmed that S. prunifolia trees are rare but an important constituent species in the evergreen broad-leaved forest of Jeju. The mean importance percentage of S. prunifolia community was 48.84 for Castanopsis sieboldii, 17.79 for Quercus acuta, and 12.12 for Pinus thunbergii; S. prunifolia was the ninth most important species (2.6). Conclusions: S. prunifolia can be found growing along the natural streams of Jeju, where there is little anthropogenic influence and where the streams have caused soil disturbance through natural processes of erosion and deposition of sediments. Currently, the native area of S. prunifolia is about 3300 ㎡, which contains a confirmed population of 180 individual plants. As a result of these low population sizes, it places it in the category of an extremely endangered plant in Korea. In some native sites, the canopy of evergreen broad-leaved forest formed, but the frequency and coverage of species were not high. Negative factors that contributed to the low distribution of this species were factors such as lacking in shade tolerance, low fruiting rates, small native areas, and special habitats as well as requiring adequate stream disturbance. Presently, due to changes in climate, it is unclear whether this species will see an increase in its population and habitat area or whether it will remain as an endangered species within Korea. What is clear, however, is that the preservation of the present native habitats and population is extremely important if the population is to be maintained and expanded. It is also meaningful in terms of the stable conservation of biodiversity in Korea. Therefore, based on the results of this study, it is judged that a systematic evaluation for the preservation and conservation of the habitat and vegetation management method of S. prunifolia should be conducted.

Development of specific SNP molecular marker from Thistle using DNA sequences of ITS region (엉겅퀴의 ITS 영역 염기서열 분석을 통한 특이적 SNP 분자마커의 개발)

  • Lee, Shin-Woo;Lee, Soo Jin;Kim, Yun-Hee
    • Journal of Plant Biotechnology
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    • v.45 no.2
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    • pp.102-109
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    • 2018
  • Thistle is a perennial plant that is widely used for medicinal purposes. Information on the genetic diversity of thistle populations are great important for their conservation and germ plasmic utilization. Although thistle is an important medicinal plant species registered in South Korea, no molecular markers are currently available to distinguish them from other similar species from different countries. In this study, we developed single nucleotide polymorphism (SNP) markers derived from the nuclear ribosomal DNA internal transcribed spacer (ITS) regions of genomic sequences to identify distinct Korean-specific thistle species via an amplification refractory mutation system (ARMS)-PCR and high resolution melting (HRM) curve analyses. We performed molecular authentication of four different kinds of thistle species from different regions using DNA sequences in the ITS intergenic region. We also developed a quantitative PCR assay using species-specific ITS primers, which allowed us to estimate the ratio of Korean-specific thistle species using varying ratios of mixed genomic DNA templates from the two species. The SNP markers developed in this study are useful for rapidly identifying specific thistle species from different countries.

An Outbreak of Histomoniasis in Backyard Sanhuang Chickens

  • Liu, Dandan;Kong, Lingming;Tao, Jianping;Xu, Jinjun
    • Parasites, Hosts and Diseases
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    • v.56 no.6
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    • pp.597-602
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    • 2018
  • Histomonas meleagridis is a facultative anaerobic parasite, which can cause a common poultry disease known as histomoniasis. The species and age of the birds impacts on the susceptibility, with turkey being the most susceptible species. Chickens are less susceptible to H. meleagridis than turkeys and usually serve as reservoir hosts. Here, the diagnosis of an outbreak of histomoniasis in backyard Sanhuang chickens is described. The primary diagnosis was made based on clinical symptoms, general changes at necropsy, histopathology, and the isolation and cultivation of parasites. The pathogen was further confirmed by cloning, PCR identification, and animal inoculation tests. A strain of H. meleagridis, named HM-JSYZ-C, with a higher pathogenicity level in chickens was obtained. The study lays a foundation for further investigations into H. meleagridis and histomoniasis in chickens.

On the phytoplankton community in Hoe-dong Reservoir (회동수원지의 식물플랑크톤군집에 관하여)

  • Mun, Seong-Gi;Hong, Chae-Gyu;Jeong, Jong-Mun
    • Journal of Environmental Science International
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    • v.4 no.3
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    • pp.167-176
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    • 1995
  • A study on phytoplankton community was carried out from June, 1992 to May, 1993 at selected stations in Hoedong Reservoir. The phytoplankton are identified as 176 taxa including 5 phylum, 67 genera. The important species in this reservoir were Asterionella formosa, C meneghiniana, Dictyosphaerium plilchellum, Fragilaria crotonensis, Melosira distans, M grantulata, M. granulata var. angustissima, M. granulate var. angntissima f. spirdis, Micractinium pussillum, Microcystis aeruginosa, Pundorina morn, Pediastrum boryanum, P. duplex, Peridinium sp., Scenedesmus quadriauda, Synedra acus, S. rumpens and S. ulna. The causative species of water bloom were identified as Microcystis aeruginsa, Trahellomonas hispida, Ceratium hirwdinella, Peridinium sp., Melosira italica, Staurastrum dorsidentiferum var. onatum in the area. During the study periods standing crcps of phytoplankton were maximum in August, 1992 and minimum in December 1992. The species dominance index and diversity index were ranged 24.7-99.9, 0.001-3.06, respectively. Key Words : phytoplankton community, causative species of water bloom, standing crops. dominance index, species diversity index.

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Comparative Study of Volatile Organic Compound Concentrations in the Yochon Industrial Estate during Spring and Fall (여천 공업단지 봄, 가을 대기 중 휘발성 유기화합물 농도 비교 연구)

  • 김영성;송철한
    • Journal of Korean Society for Atmospheric Environment
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    • v.14 no.2
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    • pp.153-160
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    • 1998
  • The concentrations of volatile organic compounds (VOCs) in the atmosphere were measured from the Yochon Industrial Estate and compared with those from Tongkwangyang and Seoul. The first important phenomenon observed in the air of Yochon was high concentrations of alkenes and in particular, ethylene and propene. For most dominant species, their means and standard deviations were high simultaneously. Concentrations of several major aliphatic species exhibited a similar pattern of diurnal variation, however, with different species combination on each day. Concentrations of several hazardous aromatic species also exhibited a similar pattern of diurnal variation on the same day, which was different from that observed in the diurnal variation of major aliphatic species. It was interpreted that some species were intermittently released from relevant processes. It was also understood that high concentrations and variations of VOC species in Yochon were localized and not related to high average concentrations of ozone in Yochon and Tongkwangyang areas.

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New record of three aquatic species of Enchytraeidae (Annelida: Clitellata) from Korea

  • Lee, Jeounghee;Jung, Jongwoo
    • Journal of Species Research
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    • v.5 no.3
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    • pp.541-546
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    • 2016
  • Enchytraeidae is one of the largest groups in Clitellata. They are commonly found in soil and aquatic environments and play important roles in these ecosystems. It is not easy to study enchytraeid clitellates because of difficulty in distinguishing morphologies between closely related species. In Korea, 29 species have been reported in this family. Of these, 27 species are terrestrial and only two species are aquatic. Here, we report three aquatic enchytraeid species new to Korea: Fridericia glandifera Friend, 1913, Henlea montana Rota, 1994 and Marionina brendae Bretscher, 1899.