• Title/Summary/Keyword: Humic soil

Search Result 176, Processing Time 0.029 seconds

Draft genome sequence of humic substance-degrading Pseudomonas sp. PAMC 29040 from Antarctic tundra soil (천연 복합유기화합물인 부식질을 분해하는 남극 툰드라 토양 Pseudomonas sp. PAMC 29040의 유전체 분석)

  • Kim, Dockyu;Lee, Hyoungseok
    • Korean Journal of Microbiology
    • /
    • v.55 no.1
    • /
    • pp.83-85
    • /
    • 2019
  • Pseudomonas sp. PAMC 29040 was isolated from a maritime tundra soil in Antarctica for its ability to degrade lignin and subsequently confirmed to be able to depolymerize heterogeneous humic substance (HS), a main component of soil organic matter. The draft genome sequences of PAMC 29040 were analyzed to discover the putative genes for depolymerization of polymeric HS (e.g., dye-decolorizing peroxidase) and catabolic degradation of HS-derived small aromatics (e.g., vanillate O-demethylase). The information on degradative genes will be used to finally propose the HS degradation pathway(s) of soil bacteria inhabiting cold environments.

Complexation of Cadmium(Ⅱ) with Humic Acids: Effects of pH and Humic Acid Origin

  • Lee, Mee-Hae;Choi, Se-Young;Chung, Kun-Ho;Moon, Hi-Chung
    • Bulletin of the Korean Chemical Society
    • /
    • v.14 no.6
    • /
    • pp.726-732
    • /
    • 1993
  • A comparative study on cadmium(II) complexation with three well characterized humic acids (SHA: soil humic acid from the Okchun Metamorphic Belt; AqHA: aquatic humic acid from Gorleben underground aquifer, Germany; CoHA: commercially available humic acid from the Aldrich Co.) was carried out in 0.1 M $NaClO_4$ at different solution pH(5.0, 5.5, and 6.0) using the ultrafiltration technique. The maximum binding ability (MBA) of the humic acids for cadmium(II) was observed to vary with their origins and solution pH. The results suggest that 1 : 1 complex predominates within the experimental range, and the conditional stability constants were calculated based on the assumption of cooperative binding, yielding log K values that were quite similar (CoHA: 4.17${\pm}$0.08; AqHA: 4.14${\pm}$0.07; SHA: $4.06{\pm} 0.12\;l\;mol^{-1}$ at pH 6.0) irrespective of humic acid origins or pH. By contrast a nonlinear Schatchard plot was obtained, using the cadmium(II) ion selective electrode speciation analysis method, which indicated that humic acid may have two or more classes of binding sites, with $log\;K_1\;and\;log\;K_2$ of 4.73${\pm}$ 0.08 and $3.31{\pm}0.14\;l\;mol^{-1}$ respectively.

Spectroscopic Investigations of Soil Humic and Fulvic Acids from Okch'ǒn Basin

  • Hyun Sang Shin;Hichung Moon;Han Beom Yang;Seok Sung Yun
    • Bulletin of the Korean Chemical Society
    • /
    • v.15 no.9
    • /
    • pp.777-781
    • /
    • 1994
  • Three humic acids (HA) and one fulvic acid (FA) are extracted from soils of the Okch'on Basin (Koyesan, Yongkwang and Taejon), and are purified and characterized using $^1H,\;^{13}C$ NMR, and IR spectroscopic methods. The results are compared with one another and with commerical humic acid (Aldrich Co) and aquatic humic acid from Gorleben underground aquifer in Germany. The IR and $^1H\;and\;^{13}C$ NMR spectral features are found to be nearly identical, suggesting that humic substances formed in the Okch'on Basin have quite similar chemical properties. These humic substances from Okch'on Basin soils have undergone low degree of aromatic condensation and have high contents of aliphatic functionalities including carbohydrates.

Chemical and Mineralogical Properties of Two Low-Humic Gley Soils of Korea (우리나라 Low-Humic Gley Soil의 이화학적(理化學的) 및 광물학적(鑛物學的) 특성(特性)에 관(關)한 연구)

  • Dewan, H.C.;Han, K.H.;Lee, Y.S.
    • Korean Journal of Soil Science and Fertilizer
    • /
    • v.1 no.1
    • /
    • pp.129-136
    • /
    • 1968
  • Low-Humic Gley Soils occur very commonly in Korea and constitute important paddy soils of the country. These soils are developed either on alluvial or fluvio-marine materials. The soils in the present invest igation are derived from the latter. The interesting morphological features of these two soils are the presence of $FeCO_3$ concretions in the subsoil and the occurrence of a buried black organic horizon of variable thickness(25-100 cm). The organic horizon overlies the greenish marine material and underlies the continental material. These soils have poor drainage and are wet most of the year. The presence of $FeCO_3$ concretions in poorly drained paddy soils has previously been reported in North America(8), Japan(9) and West Europe(7). The purpose of this investigation is to study the chemical and mineralogical characteristics of these soils; and the genesis of $FeCO_3$ concretions. Profile samples of both these soils were collected from Gimjae area, in co-operation with the Soil Survey Party. These profiles were described as follows:

  • PDF

Construction of roadbed with environmental friendly soil amendment agent (친환경 토질개량제를 이용한 도로노반 건설공사에 관한 연구)

  • 고용국
    • Proceedings of the Korean Geotechical Society Conference
    • /
    • 2003.03a
    • /
    • pp.417-421
    • /
    • 2003
  • The purpose of this paper is to study on the construction of roadbed with environmental friendly soil amendment agent. The special amendment agent used in this study is mainly composed of inorganic metal salts such as sodium chloride, magnesium chloride, potassium chloride, calcium chloride,, thus is friendly to the environment, and has a function of soil-cement-agent solidification. Various components of this agent weaken the negative function of humic acid and decompose humic acid itself. Then, the calcium cation of the cement can now be made contact directly to the soil surface. The project of local road demonstration of roadbed construction with special soil treatment agent was peformed in Northeast Thailand on August 1999 by the sponsor of Highway Department of Thailand. A series of field experiments including unconfined compressive strength were carried out to investigate the physical and mechanical characteristics of solidified roadbed treated by this solidifying agent. The results of this research showed that the roadbed using poor soil could be efficiently constructed by treatment of this amendment agent.

  • PDF

Positive Effects of Humic Substances on Plant Growth and Biological Soil Indicators when Spring barley is Green Manured on Reclaimed Soils (처리토에 녹비 식물 청보리 경작 시 휴믹 물질이 식물생장 및 생물학적 토양 인자에 주는 긍정적 영향)

  • Sua Kang;Hyesun Park;Younrho Lee;Bumhan Bae
    • Journal of Soil and Groundwater Environment
    • /
    • v.29 no.1
    • /
    • pp.51-62
    • /
    • 2024
  • A study was performed to investigate the positive impacts of humic substances (HS) on the growth of green barley, a type of green manure plant. The study was conducted in a pot culture using two different types of reclaimed soils that had been treated by land farming (DDC) and thermal desorption (YJ) methods, respectively. The experimental conditions consisted of three treatments: plant only (P), plant plus 2% HS, and no plant (control). After 89 days of culture in a controlled growth chamber, the growth of spring barley and activity of seven soil enzymes were measured. The results indicated that the addition of HS had a substantial (p<0.10) positive effect on shoot biomass in both types of soil. Furthermore, the addition of HS notably (p<0.05) enhanced all seven soil enzyme activities in both soils. Both the aboveground and belowground parts of barley plants were returned to soil and aged for 10 weeks in the same growth chamber, which resulted in notable enhancement in soil health indicators. These improvements included an increase in organic matter, a drop in bulk density, and an increase in the activity of seven different soil enzymes. When lentil seeds were planted in the aged soils, the development of the seedlings was more vigorous than that in the control in both soils, although allelopathy of barley suppressed lentil germination in soil with pH 7.0 but not in soil with pH 8.5.

Characteristics of adsorption-desorption of herbicide paraquat in soils (제초제 paraquat의 토양중 흡.탈착 특성)

  • Lee, Seog-June;Kim, Byung-Ha;Kim, Jang-Eok
    • The Korean Journal of Pesticide Science
    • /
    • v.2 no.1
    • /
    • pp.70-78
    • /
    • 1998
  • This study was conducted to investigate the adsorption-desorption characteristics of herbicide paraquat on clay minerals, humic materials, and soils under the laboratory conditions. Adsorption time of paraquat on clay minerals was faster than organic materials and soils. Adsorption amount on montmorillonite, 2:1 expanding-lattice clay mineral, was largest among the adsorbents tested. The adsorption capacity of paraquat was approximately 21 % of cation exchange capacity in soils, 45.1 % in kaolinite, and 80.6% in montmorillonite. Humic materials, humic acid and fulvic acid isolated from soil II, adsorbed larger amount of paraquat than kaolinite and soils. Distribution of tightly bound type of paraquat was larger in clay mineral and soils but loosely bound type was larger in humic acid and fulvic acid. In oxidized soil, the adsorption amount of paraquat was decreased to 85.1-95.5% of original soils. Distribution of unbound and loosely bound type of paraquat was decreased in oxidized soil but tightly bound type was increased. The competition cations decreased paraquat adsorption on humic materials and soils but not affected on montmorillonite. No difference was observed as the kinds of cations. In cation-saturated adsorbents, the adsorption amount was decreased largely in humic materials and soils but decreased a little in montmorillonite. The tightly bound type of paraquat in all adsorbents was not desorbed by pH variation, sonication, and cation application but loosely bound type was desorbed. However, the desorption amount was different as a kinds of adsorbents and desorption methods.

  • PDF

Direct Extraction of DNA from Soil for Amplification of 16S rRNA Gene Sequences by Polymerase Chain Reaction

  • Cho, Jae-Chang;Lee, Dong-Hun;Cheol, Cho-Young;Cho, Jang-Cheon;Kim, Sang-Jong
    • Journal of Microbiology
    • /
    • v.34 no.3
    • /
    • pp.229-235
    • /
    • 1996
  • Microgram quantities of DNA per gram soil were recovered with SDS- based and freeze-and thaw procedures. The average DNA fragment size was > 23 Kb. This method generated minimal shearing of extracted DNA. However, the DNA extracts still contained considerable amounts of humic impurities sufficient to inhibit PCR. Several approaches were used to reduce the interferences with the PCR (use of CTAF in extraction step, Elutip-d column purification, addition of BSA to PCR buffer) to accomplish PCR with DNA extract as a template. Most of the DNA extracts were not digested completely by restriction endonuclease, and CTAB-TREATED ane Elutip-d column purified DNA extracts were partially digested. Regarding as restriction enzyme digestion, all PCRs failed to amplify 16S rRNA gene fragments in the DNA extracts. In the case of DNA extracts only where BSA was added to PCR buffer, PCR was successfully conducted whether the DNA extracts were treated with CTAB or purified with columns. However, these two treatments were indispensable for humic impurity-rich DNA extracts to generate the PCR-compatible DNA samples. Direct extraction of DNA, coupled with these procedures to remove and relieve interferences by humic impurities and followed by the PCR, can be rapid and simple method for molecular microbiological study on soil microorganisms.

  • PDF

Amino Acids in Humic Acids Extracted from Organic By-product Fertilizers (유기질 부산물 비료에서 추출한 부식산 중 아미노산 특성)

  • Yang, Jae-E.;Kim, Jeong-Je;Shin, Myung-Kyo;Park, Yong-Ha
    • Korean Journal of Soil Science and Fertilizer
    • /
    • v.31 no.2
    • /
    • pp.128-136
    • /
    • 1998
  • Most of total nitrogen in the surface soil exists in organic forms, of which amino acid-N is the major fraction. By-product fertilizers provide soil with humic substances, and humic acid is an essential component of humus. Amino acids(AAs) are easily converted to inorganic-N forms and thus play an important role in N fertility. This experiment was conducted to investigate the contents and distributions of AAs in humic acids which were extracted from the commercial by-product fertilizers of different composting materials. Total contents of AAs in humic acids ranged from 1.2 to 5.6%, of which neutral AAs were the highest with ranges of 0.8~4.5%. AAs contents in fertilizers composted from the plant residues such as leaf litter, sawdust and bark were in an order of neutral>acidic>basic AAs. In contrast, those from animal wastes, such as poultry and pig manures, were in an order of neutral>basic>acidic AAs. Distributions of total, acidic and neutral AAs were in the respective order of leaf litter>sawdust>pig manure>poultry manure>peat, bark>sawdust>leaf litter>peat and leaf litter>sawdust>bark>peat. Distributions of the basic AAs were in the reversed order of the acidic AAs. In bark fertilizer with increasing compost maturity, contents of the acidic AAs were increased in compensation for the decreases in those of neutral and basic AAs. Results demonstrated that distributions of amino acids in humic acid of by-product fertilizers were different from composting raw materials and degrees of humification.

  • PDF

Solubilization of bromadiolone in humic acid pseudomicellar media

  • Prakash, John
    • Advances in environmental research
    • /
    • v.1 no.3
    • /
    • pp.211-221
    • /
    • 2012
  • Bromadiolone (BRD), a second generation anticoagulant often applied to the living environment to control rodents, is usually considered to have low environmental toxicity due to its poor solubility in water. In this study of the effect of humic acid (HA) on BRD using electronic absorption spectroscopy, it has been observed that BRD is appreciably solubilized even in low concentrations of aqueous HA solutions. The BRD solubilization efficiency of aqueous HA was found to be $2.39{\pm}0.14$ ($4.53{\pm}0.26{\mu}M\;ppm^{-1}$). It was also seen that BRD is reasonably solubilized in aqueous extract of farm soil.