• 제목/요약/키워드: H3K9

검색결과 10,560건 처리시간 0.041초

Characterization of Chromatin Structure-associated Histone Modifications in Breast Cancer Cells

  • Hong, Chang-Pyo;Choe, Moon-Kyung;Roh, Tae-Young
    • Genomics & Informatics
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    • 제10권3호
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    • pp.145-152
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    • 2012
  • Chromatin structure and dynamics that are influenced by epigenetic marks, such as histone modification and DNA methylation, play a crucial role in modulating gene transcription. To understand the relationship between histone modifications and regulatory elements in breast cancer cells, we compared our chromatin immunoprecipitation sequencing (ChIP-Seq) histone modification patterns for histone H3K4me1, H3K4me3, H3K9/16ac, and H3K27me3 in MCF-7 cells with publicly available formaldehyde-assisted isolation of regulatory elements (FAIRE)-chip signals in human chromosomes 8, 11, and 12, identified by a method called FAIRE. Active regulatory elements defined by FAIRE were highly associated with active histone modifications, like H3K4me3 and H3K9/16ac, especially near transcription start sites. The H3K9/16ac-enriched genes that overlapped with FAIRE signals (FAIRE-H3K9/14ac) were moderately correlated with gene expression levels. We also identified functional sequence motifs at H3K4me1-enriched FAIRE sites upstream of putative promoters, suggesting that regulatory elements could be associated with H3K4me1 to be regarded as distal regulatory elements. Our results might provide an insight into epigenetic regulatory mechanisms explaining the association of histone modifications with open chromatin structure in breast cancer cells.

4'-[N-(9-Acridinyl)]-1'-(N-methanesulfonyl)-3'-methoxyquinonediimide의 가수분해 반응메카니즘에 관한 반응속도론적 연구 (Kinetic Studies on the Mechanism of Hydrolysis of 4'-[N-(9-Acridinyl)]-1'-(N-methanesulfonyl)-3'-methoxyquinonediimide)

  • 김태린;정동인;변상용
    • 대한화학회지
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    • 제40권12호
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    • pp.733-740
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    • 1996
  • 4'-[N-(9-Acridinyl)]-1'-(N-methanesulfonyl)-3'-methoxyquinonediimide(AMQD) 의 가수분해속도상수를 25.deg.C의 수용액속에서 자외선 분광법으로 측정하여 넓은 pH에서 잘 맞는 반응속도식을 구하였다. pH에 따르는 속도상수의 변화, Bronsted plot, 가수분해 생성물을 확인, 일반염기 및 치환기 효과 등으로부터 실험 사실에 잘 맞는 반응메카니즘을 제안하였다. 즉 pH 3.00 이하에서는 acridinyl기의 질소에 양성자가 첨가된 다음 quinonoid의 4'-위치에 물의 첨가가 일어나 가수분해가 진행되며, pH 3.00-9.00 사이에서는 물분자와 수산화 음이온의 첨가가 경쟁적으로 일어나 반응이 진행되었고, pH 9.00이상에서는 수산화 음이온의 농도에만 비례함을 알았다.

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알칼리성 소독액에 의한 조류인플루엔자바이러스 불활성화 (Inactivation of Avian Influenza Viruses by Alkaline Disinfectant Solution)

  • 조수경;김희만;이창준;이주섭;서상희
    • 생명과학회지
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    • 제17권3호통권83호
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    • pp.340-344
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    • 2007
  • 조류인플루엔자바이러스는 사람 및 동물에 상당한 위협을 가하고 있다. 이 연구는 알칼리성 소독용액이 H5N1, H3N2, H6N1, H9N2형 조류인플루엔자바이러스를 불활성화시킬 수 있는지를 조사했다. 알칼리성 소독용액을 생리식염수에 100배 희석한 경우 조류인플루엔자가 MDCK 세포에서 증식하는 것을 완전히 억압하였다. 형광항체법을 이용한 실험에서도 알칼리성소독액을 처리한 H9N2 조류인플루엔자바이러스는 MDCK세포에서 증식이 억제되었고, 알칼리성 소독액을 처리하지 않은 H9N2조류인플루엔자바이러스는 증식이 억제되지 않았다. 이 결과는 알칼리성 소독액은 고병원성 H5N1을 포함을 조류인플루엔자바이러스를 방역하는데 도움이 될 수 있음을 시사한다.

알칼리 처리 및 가열, 저장에 따른 진주담치의 마비성 패류독 성분 특성 및 제독 (Detoxification and Paralytic Shellfish Poison Profile with Heating, Storage and Treatment of Alkaline in Blue Mussel, Mytilus edulis)

  • 장준호;윤소미;이종수
    • 한국식품영양과학회지
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    • 제35권2호
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    • pp.212-218
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    • 2006
  • 독화된 진주담치 (blue mussel, Mylilus edulis)를 pH 처리, 온도별 저장 그리고 가열에 의한 마비성 패류독의 독성과 독조성 특성 변화는 다음과 같다. pH 3으로 조절한 시료가 14.1 MU/g$(100\%)$으로 가장 높은 독성이 검출되었고, pH 5는 12.9 MU/g$(92.1\%)$, pH 7은 9.0 MU/g$(63.8\%)$으로 검출되었으나, 마비성 패류독은 독성이 불안정한 알칼리 조건인 pH 9에서는 3.6 Mu/g$(25.5\%)$, pH 10은 0.8 Mu/g$(5.7\%)$으로 독성 이 검출되었다. 저장기간 동안의 독성은 pH(3, 5, 7, 9) 그리고 온도(30, -5, $20^{\circ}C$)에서 5일$(19.9\~65.3\%)$까지 현저하게 감소하였으나, 5일 후부터 30일까지는 약간의 독성이 감소하였다. 그리고 더 높은 온도에서 저장에서는 독성이 더 빨리 감소하였다. 대부분의 성분인 C군(C1, C2)과 GTX1,2,3,4, STX 그리고 dcSTX으로 8개의 성분이 검출되었고, 8개의 독성분 중에서 GTX1,4, STX 그리고 dcSTX는 모든 가공 조건에서 독성이 감소함에 따라 제일 먼저 감소하였다. 독성이 기준 독성치(4 MU/g)보다 3배 이상이더라도 마쇄된 패류 육에 pH를 알칼리 (pH 7이상)로 처리하고, 10분의 가열에 의해 독성을 완전히 제거할 수 있었다.

Fluoxymesterone, $C_{20}H_{29}FO_3$의 결정구조 (The Crystal Structure of Fluoxymesterone, $C_{20}H_{29}FO_3$)

  • 김의성;박권일;조성일
    • 한국결정학회지
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    • 제4권1호
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    • pp.6-10
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    • 1993
  • 11 β ,17 β -dihydroxy-9a-fluoro-l7a-methyl androst-4-en-3-one (Fluoxymesterone), CgoH29 FO,, orthorhombic, P2,2,2,, a=13.468(5) A, b= 19.554 (2)A, c=6.578(9)A, a=b=r=90˚, A (CuKa)=1.5406 A , Dm=1.289cm-3, Dc=1.299cm-3 and Z=4 at T=298k. The structure was solved by direct method using seminvariants of ggg Parity group and refined by the full-matrix least-square method, resulting model with reliability factor R=0.069 for 1098 unique reflection over 3σ . Ring A is an 1β-2a-half chair, 5 ring has a highly symmetrical chair conformation, C ring is in a distorted chair conformation and D ring is a 13aenveLope conformation. In the crystal structure, the molecules are packed with a hydrogen bond of 011-H23‥‥03(0.5+x, 1.5-y, 1.0-z) [1.94(9) A of H‥‥0.2.786(9)A of 0‥‥0 and 165(8) ˚ of

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Chemical Constituents in Aloe barbadensis

  • Park, Man-Ki;Park, Jeong-Hill;Shin, Young-Geun;Choi, Su-Mi;Choi, Yong-Seok;Kim, Kyeong-Ho;Lee, Seung-Ki
    • Archives of Pharmacal Research
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    • 제20권1호
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    • pp.88-90
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    • 1997
  • Two compounds were newly isolated from the leaves of Aloe barbadensis Mill. Their strucutres were identified as 3, 4-dihydro-3, 9-dihydroxy-8-methoxy-3-methyl-1(2H)-anthracenone(1) and 10-.betha.-D-glucopyranosyl-1, 80, 10-trihydroxy-3-(hydroxymethyl)-(R)-9(10H)-anth racenone(2) by chemical and spectral evidences.

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단천환이 Hydrogen Peroxide에 의한 심근세포 독성에 미치는 영향 (Effects of Dancheonhwan on Hydrogen Peroxide-induced Apoptosis of H9c2 Cardiomyoblasts)

  • 나영훈;박상범;정승원;윤종민;이인;문병순
    • 동의생리병리학회지
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    • 제18권3호
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    • pp.774-782
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    • 2004
  • The water extract of Dancheonhwan (DCH) has been used to treat ischemic brain and heart damage in oriental medicine. However, little is known about the mechanism by which the water extract of DCH rescues cells from ischemic damage. Therefore, this study was designed to investigate the protective mechanisms of DCH on the H₂O₂-induced toxicity in H9c2 cardiomyoblast cells. Treatment of H₂O₂ markedly decreased the viability of H9c2 cardiomyoblast in a dose-dependent and time-dependent manner. The nature of H₂O₂-induced toxicity of H9c2 cells resulted from apoptotic death confirmed with genomic DNA fragmentation. DCH increased the viability of H₂O₂-treated H9c2 cells by about 23%, and partially suppressed the genomic DNA fragmentation and PARP cleavage. H₂O₂ also activated caspase-3 protease and -9 protease, but not both caspase-6 protease and -8 protease. H₂O₂ induced the mitochondria dysfunction, including mitochondria membrane permeability transition (MPT) and cytosolic release of cytochrome c from mitochondria, which was prevented in part by pretreatment of DCH. N-acetylcystein (NAC), a free-radical scavenger, alone increased the viability of H₂O₂-treated H9c2 cells in a dose-dependent manner. Furthermore, the combination of NAC with DCH significantly increased the viability of the H₂O₂-treated H9c2 cells in a dose-dependent manner. These data indicate that DCH has the protective effect on ROS-induced apoptosis of cadiomyoblast H9c2 cells.

Tetrabenzylalkylenediamine을 이용한 수소이온 선택성 막전극 (Hydrogen ion-selective membrane electrodes based on tetrabenzylalkylenediamine)

  • 김재우;조동희;정성숙;정구춘;박면용
    • 분석과학
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    • 제10권3호
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    • pp.161-167
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    • 1997
  • Tetrabenzylmethylenediamine(TBMDA), tetrabenzylethylenediamine(TBEDA), tetrabenzylpropylenediamine(TBPDA), tetrabenzylhexylenediamine(TBHDA)의 중성운반체를 이용한 수소이온 선택성 막전극을 제조하였다. TBMDA, TBEDA, TBPDA, TBHDA의 아미노기간의 탄소수 변화에 따라 pH 1~pH 9, pH 2~pH 9, pH 3~pH 9, pH 4~pH 9 범위에서 수소이온에 대하여 선택적이고 선형적인 감응을 나타내었으며, 각각에 대한 기울기는 48mV/pH, 52mV/pH, 64mV/pH, 59mV/pH를 나타내었다. 각 전극에 대하여 알칼리금속이온($Li^+$, $Na^+$, $K^+$) 및 알칼리토금속이온($Mg^{2+}$, $Ca^{2+}$, $Sr^{2+}$, $Ba^{2+}$), 전이금속이온($Cu^{2+}$, $Ni^{2+}$, $Co^{2+}$)과 음이온($I^-$, $Br^-$, ${NO_3}^-$, $SCN^-$)에 대한 방해효과를 측정하였다. 선택계수는 분리용액법을 이용하여 측정하였고, 산성 용액에서 선형성을 나타내는 TBMDA가 가장 좋은 결과를 나타내었다.

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Synthesis of Lithium Titanate Whisker Using Ion-Exchange of Acid Treatment

  • Um Myeong-Heon;Lee Jin-Sik
    • 한국재료학회지
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    • 제14권9호
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    • pp.627-633
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    • 2004
  • Lithium titanate whiske($Li_{x}Ti_{4}O_9$) was prepared by an ion-exchange reaction. To this end, the initial material, potassium tetratitanate ($K_{2}Ti_{4}O_9{\cdot}nH_{2}O$) was prepared by calcination of a mixture of $K_{2}CO_3\;and\;TiO_2$ with a molar ratio of 2.8 at $1050^{\circ}C$ for 3 h, followed by boiling water treatment of the calcined products for 10 h. Fibrous potassium tetratitanate could be transformed into layered hydrous titanium dioxide ($H_{2}Ti_{4}O_9{\cdot}nH_{2}O$) through an exchange of $K^{+}\;with\;H^{+}$ using 0.075 M HCl. Also, lithium titanate whisker was finally prepared as $Li^{+}\;and\;H^{+}$ ions were exchanged by adding 20 mL of a mixture solution of LiOH and $LiNO_3$ to 1g whisker and stirring for $5\~15$ days. The average length and diameter of the $Li_{x}Ti_{4}O_9$ whiskers were $10\~20{\mu}m\;and\;1\~3{\mu}m$, respectively.

PDMS 채널 내부에 성장된 산화아연 나노막대를 이용한 H7N9 인플루엔자 바이러스 전기화학 면역센서 (Electrochemical Immunosensor Based on the ZnO Nanorods Inside PDMS Channel for H7N9 Influenza Virus Detection)

  • 한지훈;이동영;박정호
    • 센서학회지
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    • 제23권4호
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    • pp.278-283
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    • 2014
  • In this study, we propose an immunosensor using zinc oxide nanorods (NRs) inside PDMS channel for detecting the influenza A virus subtype H7N9. ZnO with high isoelectric point (IEP, ~9.5) makes it suitable for immobilizing proteins with low IEP. In this proposed H7N9 immunosensor structure ZnO NRs were grown on the PDMS channel inner surface to immobilize H7N9 capture antibody. A sandwich enzyme-linked immunosorbent assay (ELISA) method with was used 3,3',5,5' tetramethylbenzidine (TMB) for detecting H7N9 influenza virus. The immunosensor was evaluated by amperometry at various H7N9 influenza antigen concentrations (1 pg/ml - 1 ng/ml). The redox peak voltage and current were measured by amperometry with ZnO NWs and without ZnO NWs inside PDMS channel. The measurement results of the H7N9 immunosensor showed that oxidation peak current of TMB at 0.25 V logarithmically increased from 2.3 to 3.8 uA as the H7N9 influenza antigen concentration changed from 1 pg/ml to 1 ng/ml. And then we demonstrated that ZnO NRs inside PDMS channel can improve the sensitivity of immunosensor to compare non-ZnO NRs inside PDMS channel.