• Title/Summary/Keyword: GyrB

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Biological Control of Strawberry Fusarium Wilt Caused by Fusarium oxysporum f. sp.fragariae Using Bacillus velezensis BS87 and RK1 Formulation

  • Nam, Myeong-Hyeon;Park, Myung-Soo;Kim, Hong-Gi;Yoo, Sung-Joon
    • Journal of Microbiology and Biotechnology
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    • v.19 no.5
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    • pp.520-524
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    • 2009
  • Two isolates, Bacillus sp. BS87 and RK1, selected from soil in strawberry fields in Korea, showed high levels of antagonism towards Fusarium oxysporum f. sp. fragariae in vitro. The isolates were identified as B. velezensis based on the homology of their gyrA sequences to reference strains. BS87 and RK1 were evaluated for control of Fusarium wilt in strawberries in pot trials and field trials conducted in Nonsan, Korea. In the pot trials, the optimum applied concentration of BS87 and RK1 for pre-plant root-dip application to control Fusarium wilt was $10^5$ and $10^6$ colony-forming units (CFU)/ml, respectively. Meanwhile, in the 2003 and 2005 field trials, the biological control efficacies of formulations of RK1 were similar to that of a conventional fungicide (copper hydroxide) when compared with a non-treated control. The RK1 formulation was also more effective than BS87 in suppressing Fusarium wilt under field conditions. Therefore, the results indicated that formulations of B. velezensis BS87 and RK1 may have potential to control Fusarium wilt in strawberries.

VARIABLE STARS IN A FIELD OF THE OLD OPEN CLUSTER M67 PHOTOMETRIC PRECISION OF THE BOAO 1.8M TELESCOPE

  • KIM SEUNG-LEE;CHUN MOO-YOUNG;PARK BYEONG-GON;LEE SEE-WOO
    • Journal of The Korean Astronomical Society
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    • v.29 no.1
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    • pp.43-51
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    • 1996
  • We present test results of time-series CCD photometry to investigate the photometric precision of the BOAO (Bohyunsan Optical Astronomy Observatory) 1.8m telescope. A well-known field of the old open cluster M67, which includes two pulsating blue stragglers and two W UMa type binaries, was monitored for 3.5 hours on February 22, 1996. We have collected 148 V frames and 3 B frames. Photometric noises which consist mainly of photon noise and scintillation noise, were lowered down to about 1.9 mmag for stars of $10.\;^m5$ in M67 with exposure time of 20 seconds. From the C-M diagram for M67, a number of observational properties were derived; E(B-V) = 0.03, (V-Mv)o = 9.6, Age = 4 Gyr. We obtained light curves for four known variable stars and confirmed their variational characteristics. The pulsating blue stragglers show a low amplitude (about 0.01 mag) of light variation.

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PHOTOMETRY STUDY OF NGC288 ON UVBY BANDPASS

  • CHEN ROSIE CHANG-HUI;Lu PHILLIP K.;TSAY WEAN-SHUN
    • Journal of The Korean Astronomical Society
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    • v.29 no.spc1
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    • pp.135-136
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    • 1996
  • We present a new photometric study of the globular cluster NGC288 in Stromgren u, v, b, y, and H$\beta$ system. This cluster is known to have an intermediate metallicity but its color-magnitude diagram has a pure blue horizontal branch, which is a signature of metal poor stellar population. We compare our dataset with Bergbusch's (1993) in both field size and CMD to see whether different photometry system would determine the same physical parameters of a cluster. Demarque and Yi's isochrones (1996, private communication) were applied to Bergbusch's dataset, and we obtained distance modulus of (m - M) = 14.9 $\pm$ 0.2, color excess of E(B - V) = 0.03, and age of 1.5$\pm$3 Gyr. Vandenberg's (1985) isochrones for Stromgren system were also applied to Bergbusch's and our data. We find that the isochrone fits to different photometric systems give rather in consist ant solutions. The source of this discrepancy may become clear when the Demarque and Yi's isochrones for Johnson system are converted to those of Stromgren system. We note that Kurucz model atmospheres provide a useful ground for this conversion work as well as theoretical study of Stromgren characteristics of globular cluster stars.

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Occurrence of Bacterial Stem Rot of Ranunculus asiaticus Caused by Pseudomonas marginalis in Korea

  • Li, Weilan;Ten, Leonid N.;Kim, Seung-Han;Lee, Seung-Yeol;Jung, Hee-Young
    • Research in Plant Disease
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    • v.24 no.2
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    • pp.138-144
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    • 2018
  • In December 2016, stem rot symptoms were observed on Persian buttercup (Ranunculus asiaticus) plants in Chilgok, Gyeongbuk, Korea. In the early stage of the disease, several black spots appeared on the stem of infected plants. As the disease progressed, the infected stem cleaved and wilted. The causal agent was isolated from a lesion and incubated on Reasoner's 2A (R2A) agar at $25^{\circ}C$. Total genomic DNA was extracted for phylogenetic analysis. Based on the 16S rRNA gene analysis, the isolated strain was found to belong to the genus Pseudomonas. To identify the isolated bacterial strain at the species level, the nucleotide sequences of the gyrase B (gyrB) and RNA polymerase D (rpoD) genes were obtained and compared with the sequences in the GenBank database. As the result, the causal agent of the stem rot disease was identified as Pseudomonas marginalis. To determine the pathogenicity of the isolated bacterial strain, it was inoculated into the stem of healthy R. asiaticus plant, the inoculated plant showed a lesion with the same characteristics as the naturally infected plant. Based on these results, this is the first report of bacterial stem rot on R. asiaticus caused by P. marginalis in Korea.

Are There Any Old Globular Clusters in the Starburst Galaxy M82?

  • Lim, Sung-Soon;Hwang, Na-Rae;Lee, Myung-Gyoon
    • The Bulletin of The Korean Astronomical Society
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    • v.36 no.1
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    • pp.63.1-63.1
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    • 2011
  • M82 is a famous starburst galaxy which is dominated by young stellar populations and ISM. Some previous studies indicated the existence of intermediate-age and old stellar population in this galaxy, but little is known about them. We present a study of old globular clusters in M82 using the Hubble Space Telescope archive data. From the cluster survey of M82 we found 650 star clusters. We divided them into disk and halo star clusters according to their position. The color-color diagrams show that all 19 halo star clusters are old globular clusters. The disk sample may include both reddened young clusters and geniune old globular clusters. We estimated their ages using spectral energy distribution fit method with six filter data covering from ultraviolet (F330W) to infrared (F160W), and found that 30 of them are older than 3 Gyr. These are considered to be disk globular clusters. Twelve of the halo globular clusters are found to be partially resolved into their member stars. The (B-V) color range of the halo globular clusters is consistent with that of the Milky Way globular clusters, but most of M82 globular clusters are bluer than (B-V)=0.7. The existence of these old globular clusters suggests that the starburst galaxy M82 has an old stellar halo that may be as old as the Milky Way halo.

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Antagonistic and Plant Growth-Promoting Effects of Bacillus velezensis BS1 Isolated from Rhizosphere Soil in a Pepper Field

  • Shin, Jong-Hwan;Park, Byung-Seoung;Kim, Hee-Yeong;Lee, Kwang-Ho;Kim, Kyoung Su
    • The Plant Pathology Journal
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    • v.37 no.3
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    • pp.307-314
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    • 2021
  • Pepper (Capsicum annuum L.) is an important agricultural crop worldwide. Recently, Colletotrichum scovillei, a member of the C. acutatum species complex, was reported to be the dominant pathogen causing pepper anthracnose disease in South Korea. In the present study, we isolated bacterial strains from rhizosphere soil in a pepper field in Gangwon Province, Korea, and assessed their antifungal ability against C. scovillei strain KC05. Among these strains, a strain named BS1 significantly inhibited mycelial growth, appressorium formation, and disease development of C. scovillei. By combined sequence analysis using 16S rRNA and partial gyrA sequences, strain BS1 was identified as Bacillus velezensis, a member of the B. subtilis species complex. BS1 produced hydrolytic enzymes (cellulase and protease) and iron-chelating siderophores. It also promoted chili pepper (cv. Nockwang) seedling growth compared with untreated plants. The study concluded that B. velezensis BS1 has good potential as a biocontrol agent of anthracnose disease in chili pepper caused by C. scovillei.

Characterization of Multifunctional Bacillus sp. GH1-13 (복합기능성 Bacillus sp. GH1-13 균주의 특징)

  • Kim, Sang Yoon;Sang, Mee Kyung;Weon, Hang-Yeon;Jeon, Young-Ah;Ryoo, Jae Hwan;Song, Jaekyeong
    • The Korean Journal of Pesticide Science
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    • v.20 no.3
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    • pp.189-196
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    • 2016
  • Several microorganisms in particular Bacillus subtilis group have been isolated from diverse places such as soils and the gastrointestinal tract of ruminants etc., and used as biocontrol agent against various plant pathogens and utilized as plant growth promoting agents. Among them, Bacillus is well known as one of the most useful bacteria for biocontrol and plant growth promotion. Bacterium GH1-13 was isolated from a reclaimed paddy field in Wando Island and identified as Bacillus velezensis using phylogenetic analysis on the basis of 16S rRNA and gyrB gene. It was confirmed that GH1-13 produced indole acetic acid (IAA) associated with promoted growth of rice root. GH1-13 showed characteristics of antagonization against the main pathogen of rice as well as diverse pathogenic fungi. GH1-13 had biosynthetic genes, bacillomycin, bacilycin, fengycin, iturin, and surfactin which are considered to be associated closely with inhibition of growth of pathogenic fungi and bacteria. This study showed that GH1-13 could be used as a multifunctional agent for biocontrol and growth promotion of crop.

Distribution of Bacterial Angular Leaf Spot of Strawberry and Characterization of Xanthomonas fragariae Strains from Korea (한국의 딸기세균모무늬병 발생분포 및 딸기세균모무늬병균 특성조사)

  • Yoon, Myung-Ju;Myung, Inn-Shik;Lee, Jae-Yeon;Kim, You-Shin;Lee, Yong-Hwan;Kim, Dae-Young;Lee, Young-Ki
    • Research in Plant Disease
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    • v.22 no.1
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    • pp.9-17
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    • 2016
  • Nationwide survey for angular leaf spot (ALS) of strawberry caused by Xanthomonas fragariae, a quarantine disease in Korea, was performed in November 2012. In the survey, ALS was observed in eighty eight farmers' fields of Sukok, Jinju and Okjong, Hadong in Gyeongnam Province, and one field in Namwon of Jeollabuk Province. The infected field of Namwon closed immediately after the disease diagnosed ALS. In detailed survey of Sukok and Okjong areas during February 2012 to January 2015, ALS occurrence decreased from 45% farmer's fields on December 2012 to 5% on January 2015, and from 38% on November 2013 to 5% on January 2015, respectively. Phenotypic characteristics of the Korean strains were similar to those of the type strain of X. fragariae. A multilocus sequence analysis of Korean strains of X. fragariae was conducted using four genes; dnaK, fyuA, gyrB, and rpoD. All the Korean strains had the same sequences of the four genes. The concatenated sequences of the Korean strains shared 100% with that of the type strain of X. fragariae. All strawberry cultivars tested were susceptible to the strains of X. fragariae two weeks after inoculation. The inoculated sites were necrosis and expanded, which were rated 4 based on evaluation of inoculation site.

First Report of Bacterial Spot Disease Caused by Pseudomonas capsici on Castor Bean in Korea (Pseudomonas capsici에 의한 아주까리 세균점무늬병의 국내 첫 보고)

  • Heeil Do;Seung Yeup Lee;Bang Wool Lee;Hyeonheui Ham;Mi-Hyun Lee;Young Kee Lee
    • Research in Plant Disease
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    • v.29 no.4
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    • pp.440-444
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    • 2023
  • In August 2021, water-soaking symptoms of bacterial spot disease were observed on castor bean in a field in Gangseo District, Busan. Bacteria isolated from the lesion when cultured on tryptic soy agar appeared to be nonmucoid and pale green. To confirm whether the isolates were the causative agent of the spot disease, they were inoculated onto healthy castor bean plants. The same symptoms were observed on the inoculated tissue, and the bacteria were reisolated from the lesion. Furthermore, the isolates were consistent with the biochemical and physiological features of Pseudomonas capsici. Sequencing analysis using 16S rRNA and housekeeping genes (gyrB, rpoD) showed that the isolates shared a high sequence similarity with P. capsici. These results confirmed that the strains belonged to P. capsici. To our knowledge, this is the first report of bacterial spot disease caused by P. capsici on castor bean in Korea.

Biological control of powdery mildew in Korean melons through a treatment with a culture of Bacillus species

  • Lee, Sang Gil;Jeon, Nak Beom;Park, Myung Soo;Yun, Hae Keun
    • Korean Journal of Agricultural Science
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    • v.47 no.4
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    • pp.1011-1020
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    • 2020
  • Efficient management systems of facilities make it possible to manage environmental conditions properly, such as the temperature, humidity and light source required for the best growth of the crops, as well as for the mass production of fruit and vegetables with high quality every year through an advanced and protected cultivation system. Powdery mildew is a type of chronic disease that is difficult to control during the production of Korean melons under a protected cultivation system, the use of which is increasing in production areas in Korea. Two Bacillus strains isolated from soil samples showed antagonistic activities against several pathogens, specifically Botrytis cinerea, Colletotrichum gloeosporioides, and Fusarium oxysporum f.sp. melonis; they were identified as Bacillus velezensis M2 and B. amyloliquefaciens M3 in a molecular biological test of the nucleotide sequences of gyrase subunit A (gyrA). The treatment was given three times at intervals of five days with 400-fold diluted cultures of B. velezensis M2 and B. amyloliquefaciens M3. This led to the inhibition of the incidence of powdery mildew disease in Korean melon leaves, which resulted in effective control efficiency against the incidence of powdery mildew disease with control values of 87% and 65%, respectively. Cultures of antagonistic microbes tested in this study can be used to increase the efficiency as part of an environmentally friendly management scheme to prevent powdery mildew disease during the protected cultivation of crops, including Korean melons.