• 한국지능시스템학회논문지
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• 제13권1호
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• pp.37-44
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• 2003

본 논문은 DNA coding 방법과 Genetic Algorithm(GA)을 사용하여 numeric(0~9) 패턴인식 성능을 비교 평가하였다. 이진스트링의 개체 집단 위에서 모의진화를 일으켜 효율적으로 최적 해를 탐색하는 GA와, 생체 분자인 DNA를 계산의 도구 및 정보 저장도구로 사용하며, Adenine(A), Cytosine(C), Guanine(G), Thymine(T)등의 4가지 염기를 사용하는 DNA coding 방법을 이용하여 numeric 패턴인식을 수행하였다. DNA coding 방법과 GA의 성능을 비교 평가하기 위해서 selection, crossover, mutation 등의 GA연산자를 DNA coding에 동일하게 적용하였다. 실험결과, DNA coding 방법은 GA보다 효과적으로 패턴인식을 수행하였다. GA에 비해 DNA coding 방법의 장점은 스트링의 길이가 가변적이고 해의 중복성을 가지며, 4가지 염기를 이용하기 때문에 해 표현이 다양함을 가지고 있다.

• Bulletin of the Korean Chemical Society
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• 제25권12호
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• pp.1863-1868
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• 2004

Kringle 5 (K5), located outside of angiostain (K1-4) in human plasminogen, displays more potent antiangiogenic activity on endothelial cell proliferation than angiostatin itself. Using a yeast two-hybrid system in vivo, we have recently identified Rgl2 (guanine nucleotide dissociation stimulator (RalGDS)-like factor 2) as a binding protein of human K5. In order to confirm in vitro protein interaction between K5 and Rgl2, we developed bacterial recombinant expression systems for them. K5 and Rgl2 proteins were expressed in high yields and purified into pure forms with His tags and GST fusion, respectively. GST-pull down experiments clearly demonstrated that K5 interacts specifically with Rgl2 in vitro. These results indicate that Rgl2 functions as a receptor protein for K5 in vitro as well as in vivo, leading to anti-angiogenesis through regulating Ras signaling pathways.

• Biomolecules & Therapeutics
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• 제31권1호
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• pp.89-96
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• 2023

Uric acid produced by guanine deaminase (GDA) is involved in photoaging and hyperpigmentation. Reactive oxygen species (ROS) generated by uric acid plays a role in photoaging. However, the mechanism by which uric acid stimulates melanogenesis in GDA-overexpressing keratinocytes is unclear. Keratinocyte-derived paracrine factors have been identified as important mechanisms of ultraviolet-induced melanogenesis. Therefore, the role of paracrine melanogenic growth factors in GDA-induced hypermelanosis mediated by uric acid was examined. The relationships between ROS and these growth factors were examined. Primary cultured normal keratinocytes overexpressed with wild type or mutant GDA and those treated with xanthine or uric acid in the presence or absence of allopurinol, H₂O₂, or N-acetylcysteine (NAC) were used in this study. Intracellular and extracellular bFGF and SCF levels were increased in keratinocytes by wild type, but not by loss-of-function mutants of GDA overexpression. Culture supernatants from GDA-overexpressing keratinocytes stimulated melanogenesis, which was restored by anti-bFGF and anti-SCF antibodies. Allopurinol treatment reduced the expression levels of bFGF and SCF in both GDA-overexpressing and normal keratinocytes exposed to exogenous xanthine; the exogenous uric acid increased their expression levels. H₂O₂-stimulated tyrosinase expression and melanogenesis were restored by NAC pretreatment. However, H₂O₂ or NAC did not upregulate or downregulate bFGF or SCF, respectively. Overall, uric acid could be involved in melanogenesis induced by GDA overexpression in keratinocytes via bFGF and SCF upregulation not via ROS generation.

• Nuclear Medicine and Molecular Imaging
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• 제40권4호
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• pp.218-227
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• 2006

목적 : 헤르페스 심플렉스 1형 바이러스 티미딘 키나제(Herpes simplex virus type 1 thymidine kinase. HSV1-tk) 유전자는 보고 유전자로서 필요한 조건뿐만 아니라 별도의 치료 유전자를 따로 이입할 필요가 없다는 장점을 가지고 있어 유전자 영상과 치료에서 가장 널리 사용되는 유전자이다. 본 연구에서는 간암세포주에서 HSV1-tk 보고 유전자 발현을 비침습적 PET 영상으로 평가하는데 있어서 $9-(4-[^{18}F]Fluoro-3-hydroxymethylbutyl)$guanine ($[^{18}F]FHBG$)의 유용성을 평가하고자 하였다. 대상 및 방법 : $[^{18}F]FHBG$는 triester로부터 8단계를 거쳐 합성하였다. $[^{18}F]FHBG$는 전구체로 N2-monomethoxytrityl-9-[4-(tosyl)-3-monomethoxytritylmethylbutyl]guanine를 사용하고 kyptofix [2.2.2.]를 이용한 친핵성 반응으로 $120^{\circ}C$에서 20분 동안 반응한 후에 1 N HCl로 보호기를 제거함으로써 합성하였다. HSV1-tk 보고 유전자가 이입되어 있는 세포주인 MCA-tk와 이입되지 않은 MCA 세포주를 이용하여 in vitro 상에서의 $[^{18}F]FHBG$의 섭취 및 방출 실험을 실시하였으며 섭취량과 발현량의 상관성 평가를 위해 세포수 백분율에 따른 섭취실험을 실시하였다. In vivo 상에서의 평가를 위하여 피하 종양 형성 동물모델을 이용하여 microPET생체영상을 획득하였다. 결과: 합성된 $[^{18}F]FHBG$를 역상 HPLC를 사용하여, 머무름 시간 16-18분에서 분리하였다. 반감기를 고려한 방사화학적 수율은 20-25%, 방사화학적 순도는 95% 이상이었으며 비방사능은 55.0 $GBq/{\mu}\;mol$ 이상이었다. HSV1-tk 유전자가 이입된 MCA-tk 세포에서는 특이적인 $[^{18}F]FHBG$의 집적이 발생하였으며 대조군인 MCA에서는 거의 집적이 이루어지지 않았다. 또한, 방출 실험에서 방출 후 1시간 경과까지 86% 이상의 $[^{18}F]FHBG$가 세포내에 잔류하였다. MCA-tk 세포주의 비율이 증가함에 따라 $[^{18}F]FHBG$의 섭취량도 직선적 상관관계($R^2=0.995$)에 따라 증가하여 기질의 섭취량이 유전자 발현량을 잘 반영하고 있음이 확인되었다. MicroPET을 이용한 생체영상에서도 MCA와 MCA-tk 에서 확연한 집적의 차이를 보여주었다. 결론: 간암세포주에서 HSV1-tk 유전자의 발현 정도와 지속성 그리고 위치를 확인하기 위한 비침습적 PET 영상을 위한 기질로서 $[^{18}F]FHBG$는 매우 유용할 것으로 기대된다.

• 한국생물물리학회:학술대회논문집
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• 한국생물물리학회 1996년도 정기총회 및 학술발표회
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• pp.38-38
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• 1996

Rab3A is a synaptic vesicle-associated, GTP-binding protein that has been implicated in the regulation of neurotransmission. We show here that Ca2+/calmodulin can form a 1:1 complex with Rab3A and cause it to dissociate from synaptosomal membranes. Formation of the complex requires both the lipidated C-terminus of Rab3A and the presence of guanine nucleotide. (omitted)

• 한국섬유공학회:학술대회논문집
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• 한국섬유공학회 2001년도 가을 학술발표회 논문집
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• pp.247-250
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• 2001

2, 3-Dicyanopyrazine derivatives have been synthesized by condensation of diaminomaleonitrile(DAMN) and a -diketone compounds. Diaminomaleohitrile (DAMN) is well known as a tetramer of hydrogen cyanide and a useful compound in the chemical industry not on]y as a starting material for synthesis of various heterocyclic compounds but also as an intermediate for synthesis of glycine, adenine, guanine et al. (omitted)

• 대한약학회:학술대회논문집
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• 대한약학회 2002년도 Proceedings of the Convention of the Pharmaceutical Society of Korea Vol.2
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• pp.407.2-407.2
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• 2002

We have been studing sensitive non-enzymatic chemiluminescence (CL) imaging methods for the detection of DNA. For one of our methods, a unique chemical derivatization reagent. 3'. 4', 5'-trimethoxyphenylglyoxal (TMPG) was utilized. This reagent reacted specifically with guanine bases in nucleic acids to quickly produce a chemiluminescent derivative under mild reaction conditions. (omitted)

• 대한약학회:학술대회논문집
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• 대한약학회 2003년도 Proceedings of the Convention of the Pharmaceutical Society of Korea Vol.2-2
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• pp.181.2-181.2
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• 2003

Inosine monophosphate dehydrogenase(IMPDH) catalyzes the $NAD^+$-dependent oxidation of IMP to XMP, the rate limiting step in the de novo biosynthesis of guanine nucleotide. Its critical role at the metabolic branch point in purine nucleotide biosynthesis makes it a useful target in the development of drugs for antiviral and anticancer chemotherapy and in immunosupressant area. Several compound with antiviral activity have been found to be inhibitors of IMPDH. For example, ribavirin, a competitive inhibitor of IMPDH, has broad spectrum antiviral activities against DNA and RNA viruses. (omitted)

• 한국가축번식학회지
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• 제20권4호
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• pp.427-432
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• 1997

These studies were performed to approach the precise pathway inducing the meiotic inhibitory action of hypoxanthine on mouse follicular oocytes and to identify the cause of detrimental effect of hypoxanthine on viability of the oocyte in vitro. In addition, a correlation between the meiotic inhibitory effect and the detrimental effect of hypoxanthine was investigated. Mouse follicular oocytes at germinal vesicle(GV) stage were collected from the ovaries of ICR mice by puncturing the antral follicles with a fine needle, at 48 hours after PMSG injection. Oocytes were cultured in Modified Whittingham's T6 media containing hypoxanthine and several materials that involved in metabolism of hypoxanthine, and the effects of the materials on the actions of hypoxanthine were investigated by observing germinal vesicle breake down (GVBD), 1st polar body (PB) extrusion and viability of the oocytes. Phophodiesterase significantly reduced the meiotic inhibitory effect of dbcAMP but did not influence on the inhibitory effect of hypoxanthine. Allopurinol and 6-MP significantly enhanced the meiotic inhibitory effect of hypoxanthine, but the materials themselves also showed the meiotic inhibitory action like hypoxanthine. Hypoxanthine-guanine phosphoribosyltransferase significantly enhanced the meiotic inhibitory effect of hypoxanthine, on the contrary HGPRT itself promoted meiotic resumption of the oocytes. Catalase did not induce any change in the meiotic inhibitory effect of hypoxanthine, but SOD increased the GVBD rate suppressed by hypoxanthine. The detrimental effect of hypoxanthine on viability of the oocytes was significantly reduced by allopurinol and catalase, but SOD increased the GVBD rate suppressed by hypoxanthine. The detrimental effect of hypoxanthine on viability of the oocytes was significantly reduced by allopurinol and catalase, but SOD did not reduce the deterimental effect of hypoxanthine. In conclusion, the meiotic inhibtory effect of hypoxanthine may be caused by guanyl dervartives converted from hypoxanthine via salvage pathway, and superoxide anion may partially participate in the inhibitory effect of hypoxanthine. The detrimental effect of hypoxanthine on viability of the oocytes be cused by hydrogen peroxide produced during the metabolism of hypoxanthine.

• 한국지능시스템학회논문지
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• 제11권6호
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• pp.538-542
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• 2001

DNA computing 은 Adleman 실험 이후에 많은 여러 가지 최적화 문제에 적용되어 왔다. DNA computing의 장점은 스트링의 길이가 가변적이고 4가지 염기를 이용하기 때문에 복잡한 문제에 전역 최적점을 찾는데 기존의 다른 방법보다는 효율적이라는것이다. 본 논문에서는 이진 스트링의 개체 지단 위에서 모의진화를 일으켜 효율적으로 최적 해를 탐색하는 GA(Genetic Algorithms)와 생체 분자와 DNA를 계산의 도구 및 정보 저장도구로 사용하여 A(Adenine). C(Cytosine), G(Guanine), T(Thymine)등의 4가지 염기를 사용하는 DNA 코딩방법을 이용하여multi-modal 함수의 전역 최적점을 탐색하는 문제에서의 각각의 성능을 조사하였다. Selection, crossover, mutation등의 GA연산자를 DNA를 코딩에 동일하게 적용하였으며 최적의 해를 탐색하는데 걸리는 시간과 찾아낸 최적해의 값을 평가한다.을 평가한다.