• 제목/요약/키워드: Genetic group

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구실바위취의 신조합명 및 계통 유연관계 (A new combination for Saxifraga octopetala (Saxifragaceae) and its phylogenetic relationship)

  • 김용인;조성현;김보윤;이정훈;강대현;김순옥;;김영동
    • 식물분류학회지
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    • 제45권4호
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    • pp.306-317
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    • 2015
  • 본 연구에서는 간혹 흰바위취(Micranthes manchuriensis)와 동일종으로 취급되기도 하는 한국 고유종 구실바위취(Saxifraga octopetala)의 분류학적 지위를 알아보고자 수행되었다. 구실바위취의 계통학적 위치와 종의 경계를 확인하기 위해 두 종의 기준표본에 대한 형태적 검토와 핵 리보솜 DNA의 ITS 지역 염기서열에 대한 집중적인 계통분석을 시행하였다. 총 65개 구실바위취 개체는 ITS 계통수에서 하나의 무리를 이루면서 Micranthes 분기군(clade)에 포함되었고, 톱바위취 및 흰바위취와 가까운 계통 유연관계를 나타내었다. 중국과 러시아에서 채집된 다수의 흰바위취 개체 역시 독자적인 분기군을 형성하면서 M. nelsoniana var. pacifica 및 M. fusca와 자매군을 이루었다. 구실바위취의 실체가 모호했던 것은 흰바위취 개체와 톱바위취의 화서를 함께 포함하고 있는 복합표본인 Wilford의 채집품(흰바위취의 기준표본)을 Nakai가 잘못 관찰하였기 때문으로 생각되었다. 구실바위취와 흰바위취의 높은 형태적 유사성에도 불구하고 이들은 지하 포복경의 특징에 있어서 차이를 보였다. ITS 계통수에서 구실바위취가 Micranthes 내에 자리하는 것으로 나타나 구실바위취는 Micranthes 내에서 종의 지위를 유지하여야 할 것으로 판단되었고, 이에 따라 신조합명(Micranthes octopetala)을 발표하였다.

Gene-gene interaction in cerebral infarction patients: Relationship between apolipopreotein E gene polymorphism and Sasang-constitution

  • Um, Jae-Young;Kim, Jong-Kwan;Joo, Jong-Cheon;Kim, Kyung-Yo;Hong, Seung-Heon;Kim, Hyung-Min
    • Advances in Traditional Medicine
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    • 제4권2호
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    • pp.104-111
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    • 2004
  • Sasang Constitutional Medicine is a major branch of Korean Traditional Oriental Medicine. The differences of disease susceptibility to be shown in Sasang constitution may be due to genetic factors. Therefore, we examined interrelationship among cerebral infarction (CI), apolipoprotein E (apoE) gene polymorphism, and Sasang constitutional classification. ApoE is a key protein modulating the highly atherogenic apoB containing lipoproteins and is a candidate gene for the development of coronary artery disease (CAD). The ${\varepsilon}2\;and/or\;{\varepsilon}4$ alleles were the first to be implicated in premature CAD, which resulted in this polymorphism being extensively studied. We investigated the association between apoE genotype and CI by case-control study in a Korean population. We also classified CI patients and control group into groups according to Sasang Constitutional Medicine. 196 CI patients and 379 controls without CI were examined. ApoE genotype was determined by 8% polyacrylamide gel separation after DNA amplification. A significant difference in the apoE genotype distribution was observed in the CI patients compared with that in controls ($X^{2}$=14.920, df=4, P=0.005). Also, the frequency of Taeumin constitution in patients with CI was significantly higher than that in controls (58.0% vs. 36.9%; P<0.001). However, the Taeumin constitution did not enhance the relative risk for CI in the subjects with apoE ${\varepsilon}2\;and/or\;{\varepsilon}4$ alleles. No differences in the apoE genotypes frequencies were observed in the Taeumin compared with that in the other constitutions. In addition, we investigated whether the DD genotype of angiotensin converting enzyme (ACE) gene, a candidate gene for CI, was associated with CI, Taeumin constitution, and apoE polymorphism. As a result, the frequency of Taeumin constitution was significantly higher in CI patients with both apoE ${\varepsilon}3/{\varepsilon}4$ and ACE ID/DD genotypes than in the remaining Sasang constitutions (14.5% vs. 8.3% and 0%) ($X^{2}$=13.521, df=6, P=0.035). In summary, we concluded that the apoE polymorphism is a major risk factor for CI in Koreans and the ACE ID/DD genotype enhanced the relative risk for CI in the subjects with apoE ${\varepsilon}3/{\varepsilon}4$ genotype and Taeumin constitution.

Influence of the Adjuvants and Genetic Background on the Asthma Model Using Recombinant Der f 2 in Mice

  • Chang, Yoon-Seok;Kim, Yoon-Keun;Jeon, Seong Gyu;Kim, Sae-Hoon;Kim, Sun-Sin;Park, Heung-Woo;Min, Kyung-Up;Kim, You-Young;Cho, Sang-Heon
    • IMMUNE NETWORK
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    • 제13권6호
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    • pp.295-300
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    • 2013
  • Der f 2 is the group 2 major allergen of a house dust mite (Dermatophagoides farinae) and its function has been recently suggested. To determine the optimal condition of sensitization to recombinant Der f 2 (rDer f 2) in murine model of asthma, we compared the effectiveness with different adjuvants in BALB/c and C57BL/6 mice. Mice from both strains sensitized with rDer f 2 by intraperitoneal injection or subcutaneous injection on days 1 and 14. The dosage was $20{\mu}g$. Freund's adjuvants with pertussis toxin (FP) or alum alone were used as adjuvants. On days 28, 29, and 30, mice were challenged intranasally with 0.1% rDer f 2. We evaluated airway hyperresponsivenss, eosinophil proportion in lung lavage, airway inflammation, and serum allergen specific antibody responses. Naive mice were used as controls. Airway hyperresponsiveness was increased in C57BL/6 with FP, and BALB/c with alum (PC200: $13.5{\pm}6.3$, $13.2{\pm}6.7$ vs. >50 mg/ml, p<0.05). The eosinophil proportion was increased in all groups; C57BL/6 with FP, BALB/c with FP, C57BL/6 with alum, BALB/c with alum ($24.8{\pm}3.6$, $20.3{\pm}10.3$, $11.0{\pm}6.9$, $5.7{\pm}2.8$, vs. $0.0{\pm}0.0$%, p<0.05). The serum allergen specific IgE levels were increased in C57BL/6 with FP or alum (OD: $0.8{\pm}1.4$, $1.1{\pm}0.8$, vs. $0.0{\pm}0.0$). C57BL/6 mice were better responders to rDer f 2 and as for adjuvants, Freund's adjuvant with pertussis toxin was better.

화기형태에 의한 국내 자생쑥의 유연관계 분석 (Phylogenetic Analysis of Artemisia spp. by Morphological Characteristics of Reproductive Organs in Korea)

  • 성정숙;이정훈;이제완;방경환;여준환;박춘근;박호기;성낙술;문성기
    • 한국약용작물학회지
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    • 제16권4호
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    • pp.218-224
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    • 2008
  • 국내자생 쑥속의 식물을 약용작물 및 산업화에 활용하기 위한 기초자료를 얻고자 본 연구를 수행하였다. 그 결과, 수집된 쑥속 식물들은 사철쑥 (A. capillaris)을 포함한 20종 1아종 2변종 24분류군으로 분류 되었으며, 이를 바탕으로 25개의 화기형질을 이용하여 주성분 분석과 군집분석을 수행하였다. 주성분 분석결과 제1주성분은 전체 분산의 44.73%, 제2주성분은 16.86%, 제 3주성분은 8.88%, 제4주성분은 7.07%의 기여율을 보였으며, 상위 제4주성분까지의 누적 기여율이 77.56%였다. 군집분석 결과, 자방의 퇴화, 아관목, 두화의 크기 등의 주요형질에 의해 크게 3개의 군으로 구분되어졌으며, 화기구조의 식별형질로는 기발표된 Dracunculus, Abrotanum, Absinthium 3절과 완전히 일치하지는 않았으나 국내 자생쑥의 분류형질로 활용이 가능하였다.

한우 육질등급이 난포란의 배반포 체외생산에 미치는 영향 (Correlation of Hanwoo (Korean Native Cattle) Carcass Classification and Oocyte Donor for Blastocyst Production In Vitro)

  • 김강식;이홍철;박용수;김소섭;박흠대
    • 한국수정란이식학회지
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    • 제30권3호
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    • pp.161-170
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    • 2015
  • These studies were conducted to establish the practical Hanwoo (Korean native cattle) improvement system through the combining of embryo transfer technology and confirming individual Hanwoo oocyte culture system and to investigate that correlation of Hanwoo carcass classification (intramuscular marbling) and oocyte donor for blastocyst production in vitro. In case of Hanwoo, the carcass meat quality grades were divided to grade $1^{{+}{+}}$, $1^{+}$, 1, 2, and 3 depends on fat distribution of longest muscle cross-sectional surface. As results, the numbers of follicular oocytes collected from individual fundamentally-registered Hanwoo yielded $1^{{+}{+}}$, $1^{+}$, 1, 2 and 3 meat quality were 9.5, 9.4, 8.5, 8.8 and 8.8 per ovary, respectively. The numbers of retrieval oocyte from follicles were significantly higher in the cattle yield $1^{{+}{+}}$, $1^{+}$ meat quality than in the cattle yield 1, 2 and 3 meat quality (p<0.05). The rates of blastocyst formation were 18.2, 21.3, 29.4, 30.9, and 31.5% in the cattle yield $1^{{+}{+}}$, $1^{+}$, 1, 2 and 3 meat quality of after in vitro maturation, respectively. It was significantly lower in the cattle yield $^{{+}{+}}$ and $1^{+}$ meat quality than in the cattle yield 1, 2 and 3 meat quality (p<0.05). In order to evaluate embryos quality, TUNNEL assay was conducted for each meat quality grade using blastocyst stage embryo on day 8. The results showed that apoptosis cell number was higher tendency in the cattle yield $1^{{+}{+}}$and $1^{+}$ meat quality (81 and 79, respectively) than in the cattle yield 1, 2 and 3 meat quality (51, 48 and 50, respectively) but there was no statistical significance in each group. After embryo transfer, the conception rate of recipient was 53.5 (23 out of 43), 52.1 (38 out of 73) and 58.0% (58 out of 100) in the meat quality of 1, $1^{+}$ and $1^{{+}{+}}$, respectively. These results showed that the conception rate was significantly higher in the cattle yield 1 meat quality than in the cattle yield $1^{{+}{+}}$, $1^{+}$, 2, and 3 meat quality (p<0.05). In summary, these results indicate that the application of confirming Hanwoo individual oocyte culture system and embryo transfer technology can make good use of the genetic resources conservation and improvement of Hanwoo. Relevance of the meat quality grade and reproductive ability of carcasses of Hanwoo will be considered to be one of the effective means for the associated research with obesity and reproduction.

느티만가닥버섯의 분자유전학적 분류 및 품종특이적 DNA 마커 탐색 (Molecular Genetic Classification of Hypsizigus marmoreus and Development of Strain-specific DNA Markers)

  • 임윤정;이창윤;박정은;김상우;이현숙;노현수
    • 한국균학회지
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    • 제38권1호
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    • pp.34-39
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    • 2010
  • 느티만가닥버섯의 품종구분을 위하여 국내 버섯보존기관으로부터 수집한 30종의 품종에 대한 RAPD 분석을 실시하였다. 이를 위하여 고체배지상의 균사로부터 염색체 DNA를 분리하였고 이를 주형으로 하여 3개의 random primer로 PCR 반응을 수행하였다. 그 결과 각 PCR 반응에서 200 bp에서 3000 bp 범위의 크기를 가진 DNA 밴드 약 30종이 관찰되었다. DNA 밴드 패턴은 UPGMA 방법으로 분석하여 그 결과를 dentrogram으로 나타내었다. 느티만가닥버섯은 2개의 클러스터로 분석되었으며, 클러스터 1은 다시 3개의 작은 그룹으로 나눌 수 있었다. 반면, 클러스터 2의 경우에는 유전적으로 클러스터 1보다 다양한 품종으로 구성되어 있었다. 흥미롭게도 덕유산에서 채집된 야생종 Hm3-10의 경우 어느 클러스터에도 속하지 않는 고유의 품종임을 확인하였다. RAPD 결과 나타나는 품종별 고유의 DNA 밴드를 품종특이적 마커로 개발하기 위하여, Hm0-4 품종의 250 bp 특이밴드를 TA-클로닝하고 염기서열을 결정하였다. 결정된 염기서열을 바탕으로 PCR primer를 디자인하였고 이를 이용하여 PCR 반응을 수행하였다. 그 결과 250 bp DNA 밴드는 Hm0-4 품종에서만 관찰되었으며 이는 이러한 접근법이 품종특이적 마커개발에 잘 적용됨을 보여주는 것이다.

탈모증 유발요인과 한의학적 치료 효과에 대한 후향적 연구 - 후천적 열성 탈모를 중심으로 - (Retrospective Study about the Causes and the Effects of Korean Medicine Treatment on Alopecia - Focused on Acquired Febrile Alopecia -)

  • 이정환;장진영;윤영준;조아라;신현진;정상욱;정연호;강여름
    • 한방안이비인후피부과학회지
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    • 제26권2호
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    • pp.30-44
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    • 2013
  • Objectives : The purpose of this study is to report the causes and the effects of korean medicine treatment on alopecia. Methods : 1050 patients with alopecia, who had visited oriental medical clinics from July 2011 to October 2012, were analyzed by self-assessments. And 153 patients of them were treated with korean medicine treatment for 3 months. Treatment results were evaluated by patients' self-assessments and global & enlarged photographic reviews. Results : 1. The gender ratio of male to female was 2:1 and most patients belonged to the 20~30 year old group. 2. Family history of baldness in alopecia patients was a total of 57.3%, paternal 44.4% and maternal 21.2%. 3. Subjective symptoms of fever in parietal region was a total of 97.4% in alopecia patients. 4. After 1 month treatment, the fever in the parietal region was decreased by 37.3% of patients. And their subjective hair loss was also significantly decreased. 5. After 3 months of treatment, the global photographic review was improved by 56.2% of the patients and the enlarged photographic review was significantly improved by 5.2% in patients' total hair count. Conclusions : A significant number of alopecia patients were young and less relative in genetic alopecia causes was less relevant than the past. Recent causes of alopecia were more concerned with the fever in parietal region. According to that reason, cooling effect korean medicine treatment was expected to be effective for febrile alopecia, and actually had significant effects on this study. For future studies, it's long term treatment and follow up studies are needed.

재배되는 단감나무로 부터 분리한 Pestalotiopsis theae의 RAPD 기법을 이용한 유전특성의 비교분석 (Randomly Amplified Polymorphic DNA Analyses of Pestalotiopsis theae Isolated from Sweet Persimon)

  • 이윤수;우수진;최혜선;김경수;강원희;김명조;심재욱;장태현;임태헌
    • 한국균학회지
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    • 제26권3호통권86호
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    • pp.365-372
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    • 1998
  • 단감이 경제과수로 점차 부각되면서 재배면적이 증가하는 반면 단일 품종으로 편중됨에 따라 주요 재배지를 중심으로 그간 문제시되지 않았던 병해가 발생하여 이로 인해 단감의 품질과 농가소득에 많은 손해를 초래하고 있다. 이중 중요 병해는 Pestalotiopsis theae에 의한 단감나무 둥근갈색무늬병을 들 수 있고, 아직까지 국내에서는 Pestalotiopsis theae에 대한 구체적인 연구가 수행되지 않고 있는 실정이며, 본 연구는 이들 병원균에 대한 기초정보를 밝히기 위하여 수행되었다. Random amplified polymorphic DNA(RAPD)를 사용하여 P. theae의 유전적 유연관계를 분석하였다. P-28(No. 14)과 SP-33 (No. 15)은 0.976으로 97%의 가장 높은 유사성을 나타났으며 SP-18 (No. 7)과 SP-21 (No. 9)은 0.430으로 가장 낮은 유사성을 보였다. 서로 비교한 균주들 간의 유사성은 60% 이하로부터 95% 이상인 것도 있었으며, 대다수의 균주들은 $50{\sim}80%$의 유사성을 나타내었다. SP-21 (No.9)은 고립된 한 집단으로 나타났으며 비교한 모든 균주와 60% 이하의 낮은 유사성을 나타내었다.

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Mapping QTLs for Tissue Culture Response of Mature Wheat Embryos

  • Jia, Haiyan;Yi, Dalong;Yu, Jie;Xue, Shulin;Xiang, Yang;Zhang, Caiqin;Zhang, Zhengzhi;Zhang, Lixia;Ma, Zhengqiang
    • Molecules and Cells
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    • 제23권3호
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    • pp.323-330
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    • 2007
  • The mature wheat embryo is arguably one of the best explants for genetic transformation because of its unlimited availability and lack of growth season restriction. However, an efficient regeneration system using mature wheat embryos (Triticum aestivum L.) is still not available. To identify genes related to the tissue culture response (TCR) of wheat, QTLs for callus induction from mature embryos and callus regeneration were mapped using an RIL population derived from the cross of 'Wangshuibai' with 'Nanda2419', which has a good TCR. By whole genome scanning we identified five, four and four chromosome regions conditioning, respectively, percent embryos forming a callus (PEFC), percent calli regenerating plantlets (PCRP), and number of plantlets per regenerating callus (NPRC). The major QTLs QPefc.nau-2A and QPcrp.nau-2A were mapped to the long arm of chromosome 2A, explaining up to 22.8% and 17.6% of the respective phenotypic variance. Moreover, two major QTLs for NPRC were detected on chromosomes 2D and 5D; these together explained 51.6% of the phenotypic variance. We found that chromosomes 2A, 2D, 5A, 5B and 5D were associated via different intervals with at least two of the three TCR indexes used. Based on this study and other reports, the TCRs of different explant types of wheat may be under the control of shared or tightly linked genes, while different genes or gene combinations may govern the stages from callus induction to plantlet regeneration. The importance of group 2 and 5 chromosomes in controlling the TCRs of Triticeae crops and the likely conservation of the corresponding genes in cereals are discussed.

아시아에서 분리된 viral haemorrhagic septicaemia virus (VHSV) isolates의 계통분석학적 비교 (Phylogenetic Analysis of Viral Haemorrhagic Septicaemia Virus (VHSV) Isolates from Asia)

  • 안상중;조미영;지보영;박명애
    • 한국어병학회지
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    • 제26권3호
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    • pp.149-161
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    • 2013
  • 바이러스성 출혈성 패혈증을 일으키는 VHSV는 국내의 넙치양식에 심각한 피해를 주고 있다. 본 연구에서는 우리나라에서 분리한 8종의 VHSV 분리주들의 glycoprotein (G)의 염기서열을 분석하여 Korean VHSV 분리주들과 기보고된 일본 및 중국의 분리주들을 계통발생학적으로 비교하여 G-protein의 8 부위(G34, C528, A755, T834, T951, T1147, T1221, T1336)에서 국내 VHSV 분리주들의 특이적인 서열을 확인하였고, 전 세계적으로 분리된 VHSV의 분리주들과의 비교결과 8 부위 중 3 부위 (A755, T834, T1221)의 국내VHSV 분리주 특이적 염기서열들을 확인하였다. 또한 중국 유래 VHSV 분리주의 특이적 염기서열 11 부위 (C498, C545, C548, C642, G648, T678, A738, C804, C834, G851, C1139)와 일본 유래 VHSV 분리주의 특이적 염기서열 1부위 (C179)를 확인하였다. 이상의 연구결과는 국내 특이적인 염기서열을 확보하여, 구역화된 수산생물 질병의 예찰, 모니터링 및 질병 관리에 유용하게 사용될 것으로 사료된다.