• 한국환경농학회지
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• 제25권4호
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• pp.371-381
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• 2006

New proteomic techniques have been pioneered extensively in recent years, enabling the high-throughput and systematic analyses of cellular proteins in combination with bioinformatic tools. Furthermore, the development of such novel proteomic techniques facilitates the elucidation of the functions of proteins under stress or disease conditions, resulting in the discovery of biomarkers for responses to environmental stimuli. The ultimate objective of proteomics is targeted toward the entire proteome of life, subcellular localization biochemical activities, and the regulation thereof. Comprehensive analysis strategies of proteomics can be classified into three categories: (i) protein separation via 2-dimensional gel electrophoresis (2-DE) or liquid chromatography (LC), (ii) protein identification via either Edman sequencing or mass spectrometry (MS), and (iii) proteome quantitation. Currently, MS-based proteomics techniques have shifted from qualitative proteome analysis via 2-DE or 2D-LC coupled with off-line matrix assisted laser desorption ionization (MALDI) and on-line electrospray ionization (ESI) MS, respectively, toward quantitative proteome analysis. In vitro quantitative proteomic techniques include differential gel electrophoresis with fluorescence dyes. protein-labeling tagging with isotope-coded affinity tags, and peptide-labeling tagging with isobaric tags for relative and absolute quantitation. In addition, stable isotope-labeled amino acids can be in vivo labeled into live culture cells via metabolic incorporation. MS-based proteomics techniques extend to the detection of the phosphopeptide mapping of biologically crucial proteins, which ale associated with post-translational modification. These complementary proteomic techniques contribute to our current understanding of the manner in which life responds to differing environment.

• Applied Biological Chemistry
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• 제42권1호
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• pp.39-44
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• 1999

각각 다른 성장기의 한우 등심에서 추출한 단백질을 이차원 전기영동법으로 분리하여 젤 상의 단백질 전개 양상을 비교하였다. 성장 0, 6, 12, 24 개월령의 한우 등심 단백질들을 길이 16 cm 튜브젤에서 등전점에 따라 분리하고, 이차원적으로 $18{\times}20$ cm, 12% SDS-polyacrylamide gel 전기영동 하여 단백질을 분리하였다. 등전점 3.0에서 9.0 그리고 분자량 15,000에서 100,000 Da 사이의 단백질들이 분리되어 Silver 염색법으로 명확히 구분할 수 있었다. 흥미롭게, 성장과정에서 단백질 발현이 증가했거나 감소한 단백질들은 저분자 단백질들 이었다. 성장 과정 중 증가된 단백질들을 분리하기 위해 수용성 단백질들을 조직으로부터 1% Triton X-100 으로 추출하였다. 그리고 이를 30%와 50% 황산암모니아로 분획하였다. 이와 같이하여 각 단백질들의 분리조건을 결정하였다. 이들 조건을 이용하여 발현이 증가된 단백질들을 분리하고 PVDF membrane에 옮겨서 아미노산 서열을 결정하여 단백질을 규명하였다.

• 한국동물학회지
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• 제23권1호
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• pp.1-12
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• 1980

큐티클 形成 및 硬化過程中 血蛋白質의 變化와 起源을 규명하고자 acrylamide gel electrophoresis와 immunodiffusion 方法을 使用하였다. Acrylamide gel electrophoresis에서 적어도 19개의 protein band가 혈림프에서 發見되었으며 脂肪體에서는 13개의 band가 確認되었는데 이들은 대체적으로 일정한 pattern을 유지하였다. 또한 혈림프와 脂肪體의 一般的인 protein band의 pattern은 $3\\sim4$개의 강하게 染色된 band와 몇 개의 가는 band가 gel의 상단에 存在하는 것이 특징이었고 적어도 5개 이상의 haemolymph protein band가 　期初에 걸쳐 일정하게 나타났다. Immunodiffusion test에서는 $8\\sim9$개의 血蛋白質에 　期初에서 나타났는데 그중 2개의 血蛋白質은 　期前에 나타났으며 다른 두 血蛋白質도 　化직 후 脂肪體에서 나타남으로써 脂肪體가 이들 血蛋白質의 起源임을 암시하였다.

• 한국식품영양과학회지
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• 제21권6호
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• pp.725-730
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• 1992

이담자 효모균 Rhodosporidium toruloides의 mating type A 세포에서 세포내 invertase를 정제하였다. 세포내 invertase는 배양 세포의 파쇄액을 산침전 시킨 후 그 상등액으로부터 DEAE-Sephadex A-50, SP-Sephadex C-50 column chromatography와 Sephadex G-200 gel fitration 등의 과정을 거쳐 polyacrylamide gel disc 전기영동상 단일 효소 단백질까지 정제되었다. 정제효소의 분자량은 gel filtration에 의하여 90,000이었고, SDS-PAGE상에서는 22,000 dalttons에서 단일 band를 보여 단일종의 subunit가 4개로 구성된 단백질로 추정된다.

• Applied Biological Chemistry
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• 제30권2호
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• pp.163-168
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• 1987

전보에서 보고한 Bradyrhizobium japonicum 9 균주와 Rhizobium fredii 7 균주의 균체 중의 단백질 Pattern의 차이를 일차원 및 이차원 전기영동법에 의하여 조사하였다. 일차원 전기영동법 (SDS-PAGE)에 의해서는 두 group의 균체에서 모두 52개의 band가 관찰되었고 그 중 6개의 main band 로써 group 간의 차이가 확인되었으며, 이차원 전기영동법(2D-PAGE)에 의한 두 group간에 단백질 구성은 Rhizobium fredii 에서는 단백질이 산성 쪽에, Bradyrhizobium japonicum 는 alkali성 쪽에 비교적 많이 분포되어 있었다. 또한 두 group 간의 균체 아미노산 조성을 조사한 결과 조선상의 뚜렷한 차이가 없었다. 분리된 근류균을 확인하는데 전기영동법이 유용하였으며, 일차원 전기영동법은 많은 균주를 신속하게 확인할 수 있었고 이차원 전기영동법은 해상력 및 분리된 단백질 spot를 분석하는데 용이하였다.

• 대한수의학회지
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• 제24권1호
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• pp.31-35
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• 1984

The hemoglobin phenotype and the gene frequencies of 44 Formosan deer(Cervus nippon) in Kyung-Gi area were examined by using cellulose acetate and starch gel electrophoresis. 1. The method of cellulose acetate electrophoresis was simplier, more clear and preserative than starch gel electrophoresis. 2. The hemoglobin phenotype was appeared 3 types as $Hb^F$ $Hb^{FS}$ and $Hb^S$. The frequencies of appearance were $Hb^F$ 47.7%, $Hb^{FS}$ 47.7% and $Hb^S$ 4.5%, respectively. 3. The genetic factors of hemoglobin were observed as $Hb^F$ and $Hb^S$ and the rates of gene frequencies were 71.6% and 28.4%, respectively.

• Journal of Microbiology
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• 제42권1호
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• pp.1-8
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• 2004

Changes in the bacterial populations of a 5-stage biological nutrient removal (BNR) process, with a step feed system for wastewater treatment, were monitored by denaturing gradient gel electrophoresis (DGGE) of PCR-amplified 16S ribosomal DNA fragments. DGGE analysis indicated seasonal community changes were observed, however, community profiles of the total bacteria of each reactor showed only minor differences in the samples obtained from the same season. The number of major bands was higher in the summer samples, and decreased during the winter period, indicating that the microbial community structure became simpler at low temperatures. Since the nitrogen and phosphate removal efficiencies were highly maintained throughout the winter operation period, the bacteria which still remaining in the winter sample can be considered important, playing a key role in the present 5-stage BNR sludge. The prominent DGGE bands were excised, and sequenced to gain insight into the identities of the predominant bacterial populations present, and most were found to not be closely related to previously characterized bacteria. These data suggest the importance of culture-independent methods for the quality control of wastewater treatment.

• 대한의생명과학회지
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• 제11권1호
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• pp.9-13
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• 2005

A total of 22 Salmonella enterica serotype Enteritidis (S. Enteritidis) isolates from human and chicken sources were analyzed by pulsed field gel electrophoresis (PFGE) using XbaI restriction enzyme to assess the genetic relationships between strains from different sources. PFGE permitted the resolution of XbaI restriction fragments of the 22 S. Enteritidis into 6 distinct PFGE types (PFT), designated PFT1 to PFT6, and 2 subtypes within PFT2, and allowed to detect between 9 and 10 bands with fragments sizes in the range of $25\~635\;kb$. Four of twelve isolates from human showed an identical PFGE patterns with 2 isolates from chickens. Also, another one isolate from human showed an identical PFGE patterns with other 5 isolates from chickens. Only one isolate from chicken, however, showed a different pattern compared to other PFTs. These results suggested that sporadic human food-poisoning cases infections caused by S. Enteritidis in this study were due to the consumption of contaminated chicken meats and that a clonally highly similar strains exist and spread between human and chicken sources.

• 한국작물학회지
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• 제50권spc1호
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• pp.4-7
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• 2005

미강으로부터 정제된 tocotrienol은 DPPH를 기질로 확인한 결과 매우 뛰어난 항산화력을 가지는 것으로 판명되었다. 또한 정상세포와 암세포를 배양하면서 tocotrienol을 처리하고 세포내의 항산화에 가장 큰 역할을 하는 superoxide dismutase와 glutathione peroxidase 활성을 측정한 결과 두 효소 모두 tocotrienol에 의하여 활성이 증가되는 것을 볼 수 있었으며, 전체적으로 암세포에서 GPX가 SOD보다 더 민감하게 증가함을 알 수 있었다.

• 대한수의학회지
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• 제39권4호
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• pp.811-818
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• 1999

A total of 16 Staphylococcus epidermidis isolates collected from 14 dogs admitted to the Veterinary Medicial Teaching Hospital in Seoul National University over eleven months were examined for in vitro antibiotic susceptibility pattern with minimum inhibitory concentration (MIC) and slime production, a virulence-associated phenotype, and were genetically characterized by pulsed-field gel electrophoresis (PFGE). The frequency of resistance to antimicrobial agents tested was not high, with a susceptibility ranging from 56.3% to 100%. Three strains exhibited multiple drug resistance against amikacin (MIC, $32-64{\mu}g/ml$), ampicillin ($32{\mu}g/ml$), fosfomycin ($32-128{\mu}g/ml$) and gentamicin ($16{\mu}g/ml$). Vancomycin, ciprofloxacin and rifampin were effective antibiotics against the isolates. All isolates were slime producers ; strains isolated from dogs which died of bacteremia were more likely to produce slime than those isolated from dogs which survived. Chromosomal DNA fingerprinting of the isolates yielded 16 different genomic types with few common bands, indicating a variety of clones of S epidermidis were prevalent in the hospital. This study revealed that PFGE is an useful method for the genotype characterization of S epidermidis strains and this organism could probably be pathogenic in some dogs with severe disorders. Further works on a larger number of epidemiologically defined strains are required to assess these results.