• Journal of Biomedical Engineering Research
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• v.41 no.3
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• pp.128-137
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• 2020

Cardiac electrophysiology studies often use simulation to predict how cardiac will behave under various conditions. To observe the cardiac tissue movement, it needs to use the high--resolution heart mesh with a sophisticated and large number of nodes. The higher resolution mesh is, the more computation time is needed. To improve computation speed and performance, parallel processing using multi-core processes and network computing resources is performed. In this study, we compared the computational speeds of CPU parallelization and GPU parallelization in virtual heart simulation for efficiently calculating a series of ordinary differential equations (ODE) and partial differential equations (PDE) and determined the optimal CPU and GPU parallelization architecture. We used 2D tissue model and 3D ventricular model to compared the computation performance. Then, we measured the time required to the calculation of ODEs and PDEs, respectively. In conclusion, for the most efficient computation, using GPU parallelization rather than CPU parallelization can improve performance by 4.3 times and 2.3 times in calculations of ODEs and PDE, respectively. In CPU parallelization, it is best to use the number of processors just before the communication cost between each processor is incurred.

• IEMEK Journal of Embedded Systems and Applications
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• v.11 no.6
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• pp.325-334
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• 2016

Recently, Open Computing Language (OpenCL) has been proposed to provide a framework that supports heterogeneous computing platforms. By using an OpenCL framework, digital communication systems can support various protocols in a unified computing environment to achieve both high portability and high performance. This article introduces a parallel software decoder of Low Density Parity Check (LDPC) codes for China Multimedia Mobile Broadcasting (CMMB) on a heterogeneous platform. Each step of LDPC decoding has different parallelization characteristics. In this paper, steps suitable for task-level parallelization are executed on the CPU, and steps suitable for data-level parallelization are processed by the GPU. To improve the performance of the proposed OpenCL kernels for LDPC decoding operations, explicit thread scheduling, loop-unrolling, and effective data transfer techniques are applied. The proposed LDPC decoder achieves high performance by using heterogeneous multi-core processors on a unified computing framework.

• KIISE Transactions on Computing Practices
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• v.21 no.2
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• pp.138-143
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• 2015

The Boyer-Moore algorithm is a single pattern string matching algorithm that is widely used in various applications such as computer and internet security, and bioinformatics. This algorithm is computationally demanding and requires high-performance parallel processing. In this paper, we propose a parallelization and performance optimization methodology for the BM algorithm on a GPU. Our methodology adopts an algorithmic cascading technique. This results in significant reductions in the mapping overheads for the threads participating in the parallel string matching. It also results in the efficient utilization of the multithreading capability of the GPU which improves the load balancing among threads. Our experimental results show that this approach achieves a 45-times speedup at maximum, in comparison with a serial execution.

• Journal of the Korea Society of Computer and Information
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• v.27 no.2
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• pp.1-8
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• 2022

In this paper, we design and implement a GPU-based parallel algorithm to effectively solve the traveling salesman problem through an ant color system. The repetition process of generating hundreds or thousands of tours simultaneously in TSP utilizes GPU's task-level parallelism, and the update process of pheromone trails data actively exploits data parallelism by 32x32 thread blocks. In particular, through simultaneous memory access of multiple threads, the coalesced accesses on continuous memory addresses and concurrent accesses on shared memory are supported. This experiment used 127 to 1002 city data provided by TSPLIB, and compared the performance of sequential and parallel algorithms by using Intel Core i9-9900K CPU and Nvidia Titan RTX system. Performance improvement by GPU parallelization shows speedup of about 10.13 to 11.37 times.

• International Journal of Advanced Culture Technology
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• v.4 no.4
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• pp.57-63
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• 2016

In this paper, we propose the optimized binarization in the GP-GPU. Because the binarinztion is esily paralledlized, we propose two ways of binary operations that utilize GP-GPU. The first method was to divide data load, subtraction and conversion, data store. The second method was processed collectibely. The second method was 2.52 times faster than the first method. After synthesizing the GP-GPU to the FPGA, the GP-GPU on the binarization were compared with the binarization on the ODROID XU. The binarization on the GP-GPU was 1.89 times faster than the binarization on the ODROID XU.

• Computers and Concrete
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• v.18 no.5
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• pp.1019-1039
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• 2016

In this paper, a parallel algorithm of nonlinear dynamic analysis of three-dimensional (3D) reinforced concrete (RC) frame structures based on the platform of graphics processing unit (GPU) is proposed. Time integration is performed using Newmark method for nonlinear implicit dynamic analysis and parallelization strategies are presented. Correspondingly, a parallel Preconditioned Conjugate Gradients (PCG) solver on GPU is introduced for repeating solution of the equilibrium equations for each time step. The RC frames were simulated using fiber beam model to capture nonlinear behaviors of concrete and reinforcing bars. The parallel finite element program is developed utilizing Compute Unified Device Architecture (CUDA). The accuracy of the GPU-based parallel program including single precision and double precision was verified in comparison with ABAQUS. The numerical results demonstrated that the proposed algorithm can take full advantage of the parallel architecture of the GPU, and achieve the goal of speeding up the computation compared with CPU.

• The Journal of the Korea Contents Association
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• v.13 no.6
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• pp.48-54
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• 2013

In these days, the state-of-art technologies employ the heterogeneous parallelization of CPU and GPU for fluid simulations in the field of computer graphics. In this paper, we present a novel CPU-GPU parallel algorithm that solves projection step of fluid simulation more efficiently than existing sequential CPU-GPU processing. Fluid simulation that requires high computational resources can be carried out efficiently by the proposed method.

• Journal of Korea Society of Digital Industry and Information Management
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• v.7 no.3
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• pp.55-61
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• 2011

This paper presents an implementation of Lattice Reduction (LR)-aided detector for Multiple-Input Multiple-Output (MIMO) system using Graphics Processing Unit (GPU). GPU is a parallel processor which has a number of Arithmetic Logic Units (ALUs), thus, it can minimize the operation time of LR algorithm through the parallelization using multiple threads in the GPU. Through the implemented LR-aided detector, we verify that the LR-aided detector operates a lot faster than Maximum Likelihood (ML) detector. The implemented LR-aided detector has been applied to WiMAX system to show the feasibility of its real-time processing. In addition, we demonstrate that the processing time can be reduced at the cost of 3dB SNR loss by limiting the repeating loop in Lenstra-Lenstra-Lovasz (LLL) algorithm which is frequently used in LR-aided detector.

• Smart Media Journal
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• v.8 no.2
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• pp.9-15
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• 2019

Since the computational complexity for hologram generation increases exponentially with respect to the size of the point cloud, parallel processing using CUDA and/or OpenCL library based on multiple GPUs has recently become popular. The CUDA kernel for parallelization needs to consist of threads, blocks, and grids properly in accordance with the number of cores and the memory size in the GPU. In addition, in case of multiple GPU environments, the distribution in grid-by-grid, in block-by-block, or in thread-by-thread is needed according to the number of GPUs. In order to evaluate the performance of CGH generation, we compared the computational speed in CPU, in single GPU, and in multi-GPU environments by gradually increasing the number of points in a point cloud from 10 to 1,000,000. We also present a memory structure design and a calculation method required in the CUDA-based parallel processing to accelerate the CGH (Computer Generated Hologram) generation operation in multiple GPU environments.

• Journal of Internet Computing and Services
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• v.15 no.2
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• pp.41-47
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• 2014

In this paper, we implemented a CUDA Fortran parallel program to run the CFD_NIMR model on GP-GPU's, which simulates air diffusion on urban terrains. A GP-GPU is graphic processing unit in the form of a PCI card, and a general calculation accelerator to perform a large amount of high speed calculations with low cost and electric power. The GP-GPU gives performance enhancement of speed by 15 times to compare the Nvidia Tesla C1060 GPU with Intel XEON 2.0 GHz CPU. In addition, the program on a GP-GPU shows efficient performance compared to an MPI parallel program on multiple CPU's. It is expected that a proposed programming method on the GP-GPU parallel program can be used for numerical models with a similar structure.