• 제목/요약/키워드: GI/G/1/K system

검색결과 98건 처리시간 0.026초

An Ontology-Based GIS for Genomic Data Management of Rumen Microbes

  • Jelokhani-Niaraki, Saber;Tahmoorespur, Mojtaba;Minuchehr, Zarrin;Nassiri, Mohammad Reza
    • Genomics & Informatics
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    • 제13권1호
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    • pp.7-14
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    • 2015
  • During recent years, there has been exponential growth in biological information. With the emergence of large datasets in biology, life scientists are encountering bottlenecks in handling the biological data. This study presents an integrated geographic information system (GIS)-ontology application for handling microbial genome data. The application uses a linear referencing technique as one of the GIS functionalities to represent genes as linear events on the genome layer, where users can define/change the attributes of genes in an event table and interactively see the gene events on a genome layer. Our application adopted ontology to portray and store genomic data in a semantic framework, which facilitates data-sharing among biology domains, applications, and experts. The application was developed in two steps. In the first step, the genome annotated data were prepared and stored in a MySQL database. The second step involved the connection of the database to both ArcGIS and $Prot{\acute{e}}g{\acute{e}}$ as the GIS engine and ontology platform, respectively. We have designed this application specifically to manage the genome-annotated data of rumen microbial populations. Such a GIS-ontology application offers powerful capabilities for visualizing, managing, reusing, sharing, and querying genome-related data.

합성제어기를 이용한 혈압 시뮬레이터의 구현 (Blood pressure simulator using hybrid controller)

  • 김철한;사공건;남기곤;전계록
    • 센서학회지
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    • 제16권1호
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    • pp.44-51
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    • 2007
  • A hybridized simulator for generating blood pressure waveform is proposed to study the remedy and/or evaluation of the conventional sphygmomanometer utilizing the oscillometric method which is widely applied. The blood pressure of a flowing fluid was controlled for the blood vessel's condition caused by a rhythmical and periodical contraction/relaxation because of the special excitatory and conductive system of the heart. In this study, a hybridized controller composed of the PI feedback controller and the feedforward controller. The inverse dynamics function is proposed to operating the control valve while the pressure is applied in an oil pressure tank. The proposed hybrid simulator reproducing the blood pressure waveform in an artificial blood vessel has kept the control performance consistent over all range. Based on these results, the proposed simulators could be applied to the development and compensation of the non invasive sphygmomanometer type as well as to study the characteristics of the blood pressure and blood vessel.

Effect of dietary net energy concentrations on growth performance and net energy intake of growing gilts

  • Lee, Gang Il;Kim, Jong Hyuk;Han, Gi Ppeum;Koo, Do Yoon;Choi, Hyeon Seok;Kil, Dong Yong
    • Asian-Australasian Journal of Animal Sciences
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    • 제30권9호
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    • pp.1314-1322
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    • 2017
  • Objective: This experiment investigated the effect of dietary net energy (NE) concentrations on growth performance and NE intake of growing gilts. Methods: Five diets were formulated to contain 9.6, 10.1, 10.6, 11.1, and 11.6 MJ NE/kg, respectively. A metabolism trial with 10 growing pigs (average body weight [BW] = $15.9{\pm}0.24kg$) was conducted to determine NE concentrations of 5 diets based on French and Dutch NE systems in a $5{\times}5$ replicated Latin square design. A growth trial also was performed with five dietary treatments and 12 replicates per treatment using 60 growing gilts (average BW = $15.9{\pm}0.55kg$) for 28 days. A regression analysis was performed to predict daily NE intake from the BW of growing gilts. Results: Increasing NE concentrations of diets did not influence average daily gain and average daily feed intake of growing gilts. There was a quadratic relationship (p = 0.01) between dietary NE concentrations and feed efficiency (G:F), although the difference in G:F among treatment means was relatively small. Regression analysis revealed that daily NE intake was linearly associated with the BW of growing gilts. The prediction equations for NE intake with the BW of growing gilts were: NE intake (MJ/d) = $1.442+(0.562{\times}BW,kg)$, $R^2=0.796$ when French NE system was used, whereas NE intake (MJ/d) = $1.533+(0.614{\times}BW,kg)$, $R^2=0.810$ when Dutch NE system was used. Conclusion: Increasing NE concentrations of diets from 9.6 to 11.6 MJ NE/kg have little impacts on growth performance of growing gilts. Daily NE intake can be predicted from the BW between 15 and 40 kg in growing gilts.

Effect of dietary calcium concentrations in low non-phytate phosphorus diets containing phytase on growth performance, bone mineralization, litter quality, and footpad dermatitis incidence in growing broiler chickens

  • Kim, Jong Hyuk;Jung, Hyunjung;Pitargue, Franco Martinez;Han, Gi Ppeum;Choi, Hyeon Seok;Kil, Dong Yong
    • Asian-Australasian Journal of Animal Sciences
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    • 제30권7호
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    • pp.979-984
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    • 2017
  • Objective: An experiment was conducted to investigate the effect of dietary Ca concentrations in low non-phytate phosphorus (NPP) diets containing phytase on growth performance, bone mineralization, litter quality, and footpad dermatitis (FPD) incidence in growing broiler chickens. Methods: A total of 1,800 21-day-old Ross 308 growing broiler chickens were allotted to 1 of 6 dietary treatments with 6 replicated cages. Six diets were formulated to provide increasing Ca concentrations of 4.0, 5.0, 6.0, 7.0, 8.0, or 9.0 g/kg in diets. The concentrations of NPP in all diets were maintained at 3.0 g/kg, and phytase was supplemented to all diets at the level of 1,000 fytase units (FTU)/kg. At the end of the 14-d feeding trial, birds were euthanized for tibia sampling, and litter samples were collected from 3 areas in the cage. The FPD incidence was measured based on a 6-point scoring system. Results: Dietary Ca concentrations had no effect on growth performance of growing broiler chickens. However, a tendency (linear, p = 0.05) for decreased feed efficiency was observed as dietary Ca concentrations were increased. The concentrations of Ca and P in the tibia of broiler chickens increased (linear and quadratic, p<0.01) with increasing Ca concentrations in low NPP diets containing phytase. Litter pH, moisture, and N contents were not affected by increasing Ca concentrations in low NPP diets containing phytase. However, a tendency (quadratic, p = 0.10) for increased FPD incidence with increasing dietary Ca concentrations was observed. Conclusion: Dietary Ca concentrations from 4.0 to 9.0 g/kg in low NPP diets containing phytase have little effects on growth performance of growing broiler chickens. However, Ca and P concentrations in the tibia are decreased if dietary Ca concentrations are less than 5.0 g/kg. The FPD incidence for growing broiler chickens may be decreased if less than 9.0 g/kg of Ca is included in diets.

돌외(Gynostemma pentaphyllum Makino) 추출물의 산화적 스트레스에 대한 항산화 및 세포보호효과 (Antioxidative and Cellular Protective Effects of Dolwoe (Gynostemma pentaphyllum Makino) Extracts against Oxidative Stress)

  • 김경미;김아랑;김아영;하지훈;현송화;정윤주;박영민;정효진;홍인기;박수남
    • 생약학회지
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    • 제48권2호
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    • pp.125-133
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    • 2017
  • In this study, we investigated the total phenolic and flavonoid contents, component analysis, antioxidative activity and cellular protective effects against oxidative stress on human skin cells in 50% ethanol extract, ethyl acetate fraction and aglycone fraction obtained from Gynostemma pentaphyllum (G. pentaphyllum) Makino. The DPPH (1,1-diphenyl-2-picrylhydrazyl) scavenging activites ($FSC_{50}$) of the 50% ethanol extracts, ethyl acetate fraction and aglycone fraction were 246.8, 147.2, $128.9{\mu}g/mL$, respectively. Reactive oxygen species (ROS) scavenging activities ($OSC_{50}$) of the 50% ethanol extract, ethyl acetate fraction and aglycone fraction on ROS generated in $Fe^{3+}-EDTA/H_2O_2$ system using the luminol-dependent chemiluminescence assay were 37.15, 10.74, $7.19{\mu}g/mL$, respectively. We investigated the cellular protective activity and the results showed that treatment of aglycone fraction ($0.05-0.39{\mu}g/mL$) protect human skin cells in a concentration-dependent manner when the skin cell damages were induced by treating them with $H_2O_2$. These results suggest that extract/fractions of G. pentaphyllum Makino may be applicable as natural antioxidants in cosmetics.

식물생장조절물질과 배지첨가물질이 켄터키 블루그래스의 식물체 재분화에 미치는 영향 (Effect of Plant Growth Regulators and Medium Supplements on Plant Regeneration of Kentucky Bluegrass)

  • 이상훈;이기원;김도현;이동기;원성혜;김기용;이병현
    • 한국초지조사료학회지
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    • 제26권2호
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    • pp.69-76
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    • 2006
  • 켄터키 블루그래스의 최적 조직 배양조건을 확립하기 위하여 성숙종자로부터 배발생 캘러스 유도 및 식물체 재분화에 미치는 배지 첨가물질의 영향을 조사하였다. 배발생 캘러스 유도시 첨가되는 auxin으로는 3 mg/L 2,4-D 처리구에서 58.3%로 캘러스 유도율이 가장 높았으며, 3 mg/L 2,4-D와 0.1 mg/L의 BA를 첨가하여 배양했을 때 형성된 캘러스는 형태적으로도 우수하였고 조직적으로 치밀하며 유백색을 띤 배발생 캘러스가 가장 많이 형성되었으며 54%의 재분화율을 나타내었다. 성숙종자를 배양함에 있어 탄소원으로는 캘러스 유도배지 30 g/L sucrose, 재분화배지에 30 g/L maltose를 첨가해 주었을 때 효율이 증가되었다. 성숙종자를 배양함에 있어 첨가물질로 캘러스 유도배지와 재분화 배지에 1 g/L의 casein hydrolysate와 500 mg/L의 L-proline을 동시에 첨가해주었을 때 캘러스 유도율과 재분화율이 각각 60.8%와 58.3%로 증가되었다. 본 연구를 통하여 확립된 효율적인 배발생 캘러스의 유도 및 식물체 재분화 체계의 확립은 Agrobacterium을 이용한 켄터키 블루그래스의 형질전환에 효율적으로 이용될 수 있을 것으로 사료된다.

The Effects of NEES on PARP Expression and Cell Death in Rat Cerebral Cortex After Ischemic Injury

  • Kim, Sung-Won;Lee, Jung-Sook;Um, Ki-Mai;Kim, Ji-Sung;Lee, Suk-Hee;Choi, Yoo-Rim;Kim, Nyeon-Jun;Kim, Bo-Kyoung;Cho, Mi-Suk;Park, Joo-Hyun;Kim, Soon-Hee
    • 국제물리치료학회지
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    • 제1권2호
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    • pp.107-112
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    • 2010
  • The majority of strokes are caused by ischemia and result in brain tissue damage, leading to problems of the central nervous system including hemiparesis, dysfunction of language and consciousness, and dysfunction of perception. The purpose of this study was to investigate the effects of Poly(ADP-ribose) polymerase(PARP) on necrosis in neuronal cells that have undergone needle electrode electrical stimulation(NEES) prior to induction of ischemia. Ischemia was induced in male SD rats(body weight 300g) by occlusion of the common carotid artery for 5 min, after which the blood was reperfused. After induction of brain ischemia, NEES was applied to Zusanli(ST 36), at 12, 24 and 48 hours. Protein expression was investigated using immuno-reactive cells, which react to PARP antibodies in cerebral nerve cells, and Western blotting. The results were as follows: In the cerebral cortex, the number of PARP reactive cells after 24 hours significantly decreased(p<.05) in the NEES group compared to the GI group. PARP expression after 24 hours significantly decreased(p<.05) in the NEES group compared to the GI group. As a result, NEES showed the greatest effect on necrosis-related PARP immuno-reactive cells 24 hours after ischemia, indicating necrosis inhibition, blocking of neural cell death, and protection of neural cells. Based on the results of this study, NEES can be an effective method of treating dysfunction and improving function of neuronal cells in brain damage caused by ischemia.

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Production of 8-epi-Tomentosin by Plant Cell Culture of Xanthium strumarium

  • Park, Jae-Sung;Yi, Gi-Hwan;Nam, Min-Hee;Park, Sun-Ho
    • Biotechnology and Bioprocess Engineering:BBE
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    • 제6권1호
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    • pp.51-55
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    • 2001
  • This study was conducted to establish a plant cell culture system for the production of medically important secondary metabolites from Xanthium strumarium. The effects of plant growth regulators including NAA, 2,4-D, kinetin, and ABA were examined in terms of callus induction, maintenance of callus and suspension cultures. It was shown that callus was induced upon treatment with NAA while embryo was induced after treatment with 2,4-D. Callus formation was further improved by treatment with ABA and NAA. The level of callusing increased by 17-29% for the seed case, cotyledon, leaf, and hypocotyl and by 96% in the case of the root. Suspension cell lines were established using calli produced from cotyledon, hypocotyl and root and cultured at 25$\^{C}$ under light conditions. The cells grew up to 15g/L with NAA 2ppm, BA 2ppm, and ABA 1ppm treatment. Supernatants of suspension cultures of cell lines derived from coyledon and hypocotyl produced some distinctive secondary metabolites, one of which was identified as 8-epi-tomentosin, which belongs to the xanthanolides. The amounts of 8-epi-tomentosin produced by the cotyledon- and hypocotylderived cell lines were 13.4mg/L and 11.0mg/L, respectively.

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ITU 모델을 이용한 공용데이터링크 기반의 공중중계 시스템의 커버리지 예측 (Coverage Prediction for Aerial Relay Systems based on the Common Data Link using ITU Models)

  • 박재수;송영환;최효기;윤창배;황찬호
    • 한국전자통신학회논문지
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    • 제15권1호
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    • pp.21-30
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    • 2020
  • 본 논문에서는 국제전기통신연합에서 권고하는 경로손실 예측모델을 이용하여 지상통제소와 무인 항공기 사이의 공대지 채널에 대한 경로손실을 예측하고, 이를 공대공 채널로 확장하여 중고도급 무인 항공기를 기반으로 하는 공중중계 시스템에 대한 네트워크 커버리지를 분석한다. 대기에 의한 경로손실 예측을 위해 한반도의 기후 및 지리적 인자를 활용하였다. 특히 국내의 강우량 및 유효지구반경 인자는 한국정보통신기술협회에서 공시한 실측 데이터를 활용하여 정확도를 높였다. 또한, 공중중계 송수신기는 현재 국내에서 개발 완료된 공용데이터링크 시스템의 주요지표를 활용하였다. 예측 결과로부터 임무 고도가 높아질수록 공중중계 시스템의 네트워크 커버리지가 넓어짐을 확인하였다.

자성 미세입자에의 항체 고정화 방법이 면역결합반응에 미치는 영향 (Effect of Antibody Immobilization Method to Magnetic Micro Beads on its Immunobinding Characteristics)

  • 최효진;황상연;장대호;조형민;강정혜;성기훈;주재범;이은규
    • Korean Chemical Engineering Research
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    • 제44권1호
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    • pp.65-72
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    • 2006
  • 자력을 이용한 분리기술의 장점을 이용하여 여러 가지 불순물들이 섞여 있는 현탁 용액으로부터 자성입자를 이용하여 목적 단백질만을 얻어낼 수 있는 기술의 가능성에 대하여 알아보고자 하였다. 자성입자를 이용하는 경우에는 (1) 자성입자 표면에 리간드 고정화, (2) ligand(리간드)와 목적 물질과의 특이적 결합, (3) 자력을 이용한 자성입자의 분리, (4) 목적 물질의 탈착 그리고 (5) 자성입자의 재사용 순서로 진행되어 여러 단계의 공정을 단순화시킬 수 있다. 이러한 자성입자를 이용한 방법은 효율성, 단순성, 까다롭지 않은 조건, 자동화의 용이성, 비용의 저렴함으로 인해 관심이 증대되고 있다. 본 연구에서는 표면이 카르복실기로 처리된 자성입자에 IgG 항체를 고정화시킨 후 IgG를 목적 단백질로 하여 이를 분리해내고자 하였다. 이를 위하여 자성입자 표면에 다른 물질과의 비특이적 결합이 일어나지 않을 조건에 대하여 확인해 보았으며, IgG 항체를 배향성 고정화시켜 자성입자가 목적 단백질과 보다 효과적으로 결합하여 목적 단백질인 IgG만을 선택적으로 분리해 낼 수 있는지에 대하여 알아보았다. 높은 pH를 사용할 경우 비특이적 흡착을 줄일 수 있었으며, IgG 항체 고정화된 자성입자를 사용할 경우 목적 단백질인 IgG와 선택적으로 반응함을 알 수 있었다. IgG 항체의 고정화에서 Fc지역 C-terminus에 인접해 있는 탄수화물 부분을 이용하여 배향성을 준 경우, IgG 항체 내의 아민기와 고정화시키는 비배향성 고정화 방법보다 항원과의 결합능력이 약 2배 높았다.