• 제목/요약/키워드: Fungal rDNA

검색결과 283건 처리시간 0.033초

국내 미기록 진균 5종 보고 (A Report of Five Unrecorded Fungal Species of Korea)

  • 안금란;김보영;이근식;현민우;이찬중;김성환
    • 한국균학회지
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    • 제44권4호
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    • pp.240-246
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    • 2016
  • 2015년 찐고구마, 저장 마늘, 소나무재선충병에 감염된 목재칩, 버섯재배 배지용 농업부산물 등의 식물재료로부터 진균을 조사하던 중 5종의 진균을 분리하고 동정하였다. 본 논문에서는 동정된 Geomyces pannorum, Neopestalotiopsis javaensis, Ophiognomonia setacea, Penicillium allii, Penicillium chermesinum 등 5종 진균을 국내 미기록 진균으로 보고하고자 한다. 이들 미기록 균류에 대한 배양 배지에서의 집락 형성 특성과 광학현미경 관찰을 의한 미세구조 특성, 그리고 internal transcribed spacer (ITS) rDNA region 또는 calmodulin 유전자 염기서열에 기반한 분자계통학적 관계에 대해 기술하였다.

Gibberellin Production and Plant Growth Enhancement by Newly Isolated Strain of Scolecobasidium tshawytschae

  • Hamayun, Muhammad;Khan, Sumera Afzal;Kim, Ho-Youn;Chaudhary, Muhammad Fayyaz;Hwang, Young-Hyun;Shin, Dong-Hyun;Kim, In-Kyeom;Lee, Byung-Hyun;Lee, In-Jung
    • Journal of Microbiology and Biotechnology
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    • 제19권6호
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    • pp.560-565
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    • 2009
  • We isolated nine endophytic fungi from the roots of salt-stressed soybean cultivar Daewonkong and screened them for growth-promoting secondary metabolites. Of all fungal isolates, P-4-3 induced maximum growth promotion of waito-c rice and soybean. Analysis of the culture filtrate of P-4-3 showed the presence of physiologically active gibberellins $GA_1$, $GA_3$, $GA_4$, and $GA_7$, along with physiologically inactive $GA_{15}$ and $GA_{24}$. The plant growth promotion and gibberellin-producing capacity of P-4-3 was much higher than wild-type Gibberella fujikuroi, which was taken as the control during the present study. The fungal isolate P-4-3 was identified as a new strain of Scolecobasidium tshawytschae through the morphological characteristics and phylogenetic analysis of 18S rDNA sequence. Gibberellins production and plant growth promoting ability of genus Scolecobasidium was reported for the first time in the present study.

Occurrence of Phytopythium vexans Causing Stem Rot on Anthurium andraeanum in Korea

  • Park, Mi-Jeong;Back, Chang-Gi;Park, Jong-Han
    • 한국균학회지
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    • 제47권4호
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    • pp.443-446
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    • 2019
  • In 2017, wilting symptom was observed on seedlings of Anthurium andraeranum in Youngin, Korea. Brownish lesions with water soaking were developed on the stems and roots of the infected plants. The stems and leaves wilted and finally died. One fungal isolate was obtained in pure culture. Morphological features and nucleotide sequences of internal transcribed spacer rDNA and cytochrome oxidase subunit II mt DNA were analyzed. The results of this study indicated that the fungus is identified as Phytopythium vexans. Pathogenicity tests showed the isolate was pathogenic to the seedlings of A. andraeanum. To our knowledge, this is the first report of P. vexans causing stem rot on A. andraeanum in Korea.

Identification of Aspergillus Strain with Antifungal Activity Against Phytophthora Species

  • KANG SUNG WOO;HONG SUK IN;KIM SEUNG WOOK
    • Journal of Microbiology and Biotechnology
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    • 제15권2호
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    • pp.227-233
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    • 2005
  • Fungal strain CGF was isolated from the soil of ChungNam Province, South Korea. Based on the 28S rDNA sequence analysis and the sequence of the internal transcribed spacer (ITS) region of ribosomal DNA, together with morphological and cultural characteristics, this strain was identified as Aspergillus sclerotiorum and renamed Aspergillus sclerotiorum CGF. This is the first strain of Aspergillus sclerotiorum identified in Korea. When the antifungal activity of A. sclerotiorum CGF was evaluated, among the phytopathogenic fungi, mycelial growth of only Phytophthora species was inhibited. Oermination of P. capsid zoospore was also inhibited. The bioactive compound of A. sclerotiorum CGF was highly thermo- and pH-stable.

Taxonomical Study of Noteworthy Species of Botryosphaeria in Japan

  • Hattori, Yukako;Ando, Yuho;Sasaki, Atsuko;Uechi, Nami;Nakashima, Chiharu
    • Mycobiology
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    • 제49권2호
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    • pp.122-132
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    • 2021
  • The reexamination of the fungal genus Botryosphaeria on 12 plant species of 10 families was carried out based on molecular phylogenetic analyses using the regions of translation elongation factor 1-α, β-tubulin, DNA-directed RNA polymerase II subunit, and internal transcribed spacer region of rDNA and morphological characteristics. Japanese isolates were divided into five clades and include Botryosphaeria dothidea, B. qingyuanensis, B. sinensis, and Botryosphaeria spp. Two species, B. qingyuanensis and B. sinensis have been newly added to the Japanese mycoflora, but their host plants are not specified. Botryosphaeria tenuispora isolated from Leucothoe fontanesiana and insect galls on fruits of Aucuba japonica has been proposed as a new species.

밤나무 잉크병균, Phytophthora katsurae의 검출을 위한 Duplex PCR (A Duplex PCR for Detection of Phytophthora katsurae Causing Chestnut Ink Disease)

  • 이동현;이선근;김혜정;이상현;이상용;이종규
    • 식물병연구
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    • 제18권2호
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    • pp.73-79
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    • 2012
  • Phytophthora katsurae는 밤나무 잉크병의 원인이 되는 병원성 균류이다. P. katsurae를 검출하기 위하여 2개의 duplex PCR primer set을 제작하였다(SOPC 1F/1R+KatI 3F/5R, SOPC 1-1F/1-1R+KatI 3F/5R). SOPC 1F/1R과 SOPC 1-1F/1-1R primer pair는 sequence characteristic amplification regions(SCAR)를 이용하여 제작하였고, KatI 3F/5R primer pair는 internal transcribed spacer(ITS) 부위로부터 제작하였다. 추출한 genomic DNA를 1 mg/ml에서 1 ng/ml까지 10배씩 순차적으로 희석하여 균사량에 따른 Duplex PCR의 민감도를 확인한 결과, 2개의 primer set은 각각 1 ${\mu}g/ml$와 100 ng/ml까지 검출이 가능하였다. 유주포자를 $1{\times}10^6$부터 $1{\times}10^2$ cells/ml까지 10배씩 순차적으로 희석하고 genomic DNA를 추출하여 P. katsurae의 유주포자량에 의한 검출 한계를 확인한 결과, 2개의 primer set 모두 $1{\times}10^5$ cells/ml까지 검출할 수 있었다. 각각의 primer set은 PCR 검출을 실시하였을 때 P. katsurae 균주에서만 PCR 산물이 증폭된 반면에, Phytophthora 16종에서는 P. katsurae에 특이적인 PCR 증폭산물이 생성되지 않았다. 따라서, 2개의 primer set을 이용한 Duplex PCR은 P. katsurae의 신속하고 효과적인 검출에 유용하게 활용될 수 있을 것이다.

Classification and Expression Profiling of Putative R2R3 MYB Genes in Rice

  • Kim, Bong-Gyu;Ko, Jae-Hyung;Min, Shin-Young;Ahn, Joong-Hoon
    • Journal of Applied Biological Chemistry
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    • 제48권3호
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    • pp.127-132
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    • 2005
  • MYB genes, comprising group of related genes found in animal, plant, and fungal genomes, encode common DNA-binding domains composed of one to four repeat motifs. MYB genes containing two repeats (R2R3) constitute largest MYB gene family in plants. R2R3 MYB genes play important roles in regulation of secondary metabolism, control of cell shape, disease resistance, and hormone response. Eight-four R2R3 MYB genes were retrieved from rice genome for functional characterization of MYB genes. Analysis of MYB domains revealed each MYB domain contains three ${\alpha}$-helices with regularly spaced tryptophan residues. R2R3 MYB genes were divided into four subfamilies based on phylogenic analysis result. Real-time PCR analysis of 34 MYB genes revealed 12 MYB genes were highly expressed in seeds than in leaves, whereas 4 genes were highly expressed in leaves.

New Record of $Mariannaea$ $elegans$ var. $elegans$ in Korea

  • Tang, Longqing;Hyun, Min-Woo;Yun, Yeo-Hong;Suh, Dong-Yeon;Kim, Seong-Hwan;Sung, Gi-Ho
    • Mycobiology
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    • 제40권1호
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    • pp.14-19
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    • 2012
  • A $Mariannaea$ fungus was isolated during investigation of an elm tree infested with unidentified beetles. Based on morphological characteristics and molecular analysis of the internal transcribed spacer rDNA sequence, the fungus was identified as $Mariannaea$ $elegans$ var. $elegans$. Fungal growth was better on malt extract agar than on potato dextrose agar and oatmeal agar. Optimal temperature and pH for growth of the fungus were $30^{\circ}C$ and pH 7.0, respectively. The fungus was found to have the ability to produce extracellular enzymes such as amylase, ${\beta}$-glucosidase, cellulase, and protease. This is first report on $M.$ $elegans$ var. $elegans$ in Korea.

생강나무(Lindera obtusiloba)의 잎에서 분리한 내생균의 다양성 (Diversity of Foliar Endophytic Fungi Isolated from Lindera obtusiloba in Korea)

  • 김창균;어주경;엄안흠
    • 한국균학회지
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    • 제40권3호
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    • pp.136-140
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    • 2012
  • 생강나무에 공생하는 내생균의 다양성을 확인하기 위하여, 강원도 4 개 지역에서 병증이 없는 생강나무 잎을 채집하여 내생균을 분리하였다. 분리된 내생균의 rDNA의 ITS지역을 분석한 결과, Alternaria alternata, Annulohypoxylon annulatum, Creosphaeria sassafras, Diaporthe eres, Discosia sp., Epicoccum nigrum, Glomerella acutata, Glomerella cingulata, Paraconiothyrium brasiliense, Pestalotiopsis neglecta, Phomopsis amygdali, Xylaria sp.의 총 7과 11속 12종이 확인되었으며 Phomopsis amygdali가 모든 연구 지역의 생강나무 잎에서 가장 높은 빈도로 분리되었으며 채집지에 따라 내생균의 종 다양성에 차이가 있음을 확인하였다.

Sixteen New Records of Ascomycetes from Crop Field Soil in Korea

  • Adhikari, Mahesh;Kim, Sangwoo;Kim, Hyun Seung;Lee, Hyang Burm;Lee, Youn Su
    • 한국균학회지
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    • 제44권4호
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    • pp.271-288
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    • 2016
  • The present study reports 16 species of Ascomycota that were previously unknown in Korea, namely Acremonium cellulolyticus (KNU14-25), Acremonium zonatum (KNU14-15), Chaetomium madrasense (KNU14-9), Cladosporium silenes (KNU 14-18-1), Humicolopsis cephalosporioides (KNU15-3), Leptosphaerulina chartarum (KNU14-16), Paecilomyces marquandii (KNU14-8), Paecilomyces tenuis (KNU14-18-2), Paraphaeosphaeria sporulosa (KNU15-2), Penicillium rubidurum (KNU14-12), Pochonia suchlasporia (KNU15-6), Sporothrix inflata (KNU15-8), Thielavia hyrcaniae (KNU15-1), Thielavia terricola (KNU14-23-1), Xylogone sphaerospora (KNU15-7), and Zopfiella longicaudata (KNU15-5). These fungal species were isolated from soil samples collected from various regions of Korea and identified based on their morphological characteristics and rDNA internal transcribed spacer sequence data. Full descriptions and illustrations for each species are provided.