• 제목/요약/키워드: Fungal genera

검색결과 217건 처리시간 0.032초

반추위 곰팡이 다양성 조사 : 메타분석 (Diversity Census of Fungi in the Ruminal Microbiome: A meta-analysis)

  • 송재용;정진영;김민석
    • 한국산학기술학회논문지
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    • 제18권12호
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    • pp.466-472
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    • 2017
  • 본 연구의 목적은 곰팡이 28S rDNA 염기서열의 메타분석을 통하여 반추위 곰팡이의 다양성을 조사하는데 있다. 'rumen'과 'ruminal'이 반추위 곰팡이 유래 염기서열들을 회수하기 위한 검색어로 사용되었다. 2016년 9월부로 모든 28S rDNA 염기서열이 보관되어 있는 Ribosomal Database Project(RDP, http://rdp.cme.msu.edu) 데이터베이스에서 반추위 곰팡이 유래 28S rDNA 유전자 염기서열(n=165)을 획득하였다. 총 165개의 염기서열은 분류학상의 '문(phylum)'인 Ascomycota, Neocallimastigomycota 및 Basidiomycota로 분류되었고, 165개의 염기서열 중에서 각각 109개, 48개, 8개의 염기서열을 차지하였다. Ascomycota 염기서열은 식물병원성곰팡이나 마이코톡신을 생성하는 곰팡이를 포함하고 있는 '속(genus)' Pseudonectria, Magnaporthe, Alternaria, Cochliobolus, Cladosporium 및 Davidiella로 분류되었다. 또한, Basidiomycota 염기서열은 식물병원성곰팡이를 포함하고 있는 '속(genus)' Thanatephorus와 Cryptococcus로 분류되었다. 뿐만 아니라, Neocallimastigomycota 염기서열의 경우 섭취된 조사료의 주요 구조탄수화물을 분해하는 '속(genus)' Cyllamyces, Neocallimastix, Anaeromyces, Caecomyces, Orpinomyces, Piromyces로 분류되었다. 본 연구는 처음으로 28S rDNA 염기서열의 메타분석을 통해 반추위 곰팡이 다양성에 대한 정보를 통합적으로 제공하였다. 본 연구의 결과는 향후 반추위 곰팡이 연구에 대한 방향을 제공할 것이고, 새로운 분석도구 개발에 응용될 수 있을 것이다.

국내 표고버섯 재배사에 바이오에어로졸로서 분포하는 진균의 농도와 종 분석 (Analysis of Fungal Concentration and Species Present as Bio-aerosols in Oak Mushroom Cultivation Houses)

  • 김성환;김지은;김준영
    • 한국균학회지
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    • 제46권4호
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    • pp.393-403
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    • 2018
  • 공기에 의해 운반되는 바이오에어러졸은 농산물 오염을 널리 일으키는 원인으로 알려져 있다. 육안으로 보이지 않는 진균 포자는 버섯 재배 중에 버섯과 인간의 건강에 해를 끼치는 바이오에어로졸이다. 본 연구는 한국의 표고버섯 재배사 실내의 공기 중에 존재하는 진균의 농도 및 종 분포에 관한 기초 자료를 얻기 위해 수행되었다. 2015년과 2016년에 국내 6 개의 다른 지역에 위치한 13 개의 표고버섯 재배 농장에서 21 차례 실내공기로부터 진균 포자를 샘플링하고 분석하였다. 공기 중 진균 농도는 $1.30{\times}10^2-1.59{\times}10^4cfu/m^3$ 범위였다. 중요하게도 20 차례의 농장방문 시료 채취 결과에서 진균 농도가 환경부의 실내공기질 권장 기준 농도인 $500cfu/m^3$를 초과하였다. 총 450 균주의 진균이 분리되었으며 46 속 33 종으로 동정되었다. 이중에 인체 위해균(4 속 4 종)과 식물병원균(10 속 13 종)이 존재하였다. 또한, 버섯 건강에 영향을 미치는 해로운 종인 Trichoderma harzianum, T. atroviride 및 T. longibrachiatum가 21 건 시료 채취 중 17 건에서 빈도 높게 검출되었다. 본 결과는 버섯생산의 재배관리를 위해서 재배사 실내 공기질을 개선해야 한다는 증거를 제시하였다.

Ophiostomatoid Fungi in Pine Wilt Disease and Oak Wilt Disease in Korea

  • Kim, Seong Hwan
    • 한국균학회소식:학술대회논문집
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    • 한국균학회 2014년도 춘계학술대회 및 임시총회
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    • pp.41-41
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    • 2014
  • Pinewood nematode (PWN, Bursaphelenchus xylophilus) is a serious pathogenic worm that quickly dry pine trees to death. Recently, PWN has been devastating huge amounts of conifer trees in Korea. As a first step to explore the association and ecological roles of fungi in PWN life cycle in Korea, in this study we first isolated and indentified fungi from PWN-infested Korean pine and Japanese black pine wood sampled in Jinju, Sacheon, Pocheon, Chuncheon, Gwangju, and Hoengseong in Korea. A total of 144 fungal isolates were obtained from Japanese black pine wood and 264 fungal isolates from Korean pine wood. Their morphology and nucleotide sequences of the ITS rDNA and ♌-tubulin gene were examined for species identification. Ophiostoma ips, Botrytis anthophila, Penicillium sp., Hypocrea lixii, Trichoderma atroviride, O. galeiforme, Fusarium proliferatum were identified from Japanese black pine wood. Leptographium koreanum, L. pini-densiflorae, Ophiostoma ips, Penicillium raistrick, Trichoderma sp. were isolated from Korean pine wood. O. ips and L. koreanum were the major species on the two different PWN-infected pine tree. The cultivation of PWN on fungal mat of the identified species did some enhance PWN reproduction. The ambrosia beetle, Platypus koryoensis, is a serious pest of oak trees in Korea. In this study we investigated filamentous fungi present in the body of the beetle. Fourteen genera of filamentous fungi belonging to Ascomycota and Basidiomycota were isolated. All the obtained genera were isolated in the mitosporic state. The identified fungi were classified in 11 distinct orders including the Ascomycota (Eurotiales, Hypocreales, Microascales, Ophiostomatales, Pleosporales, and Sordiales) and Basidiomycota (Agaricales, Corticiales, Polyporales, and Russulales Xylariales). Within Ascomycota, 13 species were found. Meanwhile five species were found within Basidiomycota. The results showed the presence of diverse fungi in P. koryoensis. Among the isolated fungi, some were able to produce wood degrading enzymes. Further fungal isolation was performed with P. koryoensis infested Quercus mongolica trees sampled at Kumdan mountain in Hanam-Si, Gyeonggi province from June of 2009 to June of 2010. Penicillin spp. and Trichoderma spp. were the major species of mold fungi group. Pichia guilliermondii was the major species of mold yeast group. Raffaelea quercus-mongolicae was also isolated, but its isolation frequency was not high. Other species identified were Ambrosiella xylebori, Fusarium solani, Cryphonectria nitschke, Chaetomium globosum, and Gliocladium viride, Candida kashinagacola, C. maritima, C. vanderkliftii, Saccharomycopsis crataegensis.

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낙동강 지류의 하천 습지에 자생하는 수생식물에서 분리된 내생균류의 다양성 (Diversity of Endophytic Fungi Isolated from Hydrophytes in Wetland of Nakdong River)

  • 유영현;이명철;김종국
    • 한국균학회지
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    • 제43권1호
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    • pp.13-19
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    • 2015
  • 낙동강 지류의 하천에 자생하는 5종류의 수생식물인 마름, 물억새, 미나리, 부들, 및 줄을 채집하였다. 수생식물의 뿌리에서 분리된 34균주의 내생균류는 ITS영역 염기 서열을 분석하였다. 분리된 모든 내생균류들에 대하여 다양성 지수와 계통분석을 수행하였다. 내생균류는 17속으로서, Acremonium속, Alternaria속, Aspergillus속, Cladosporium속, Emericellopsis속, Fusarium속, Galactomyces속, Leptosphaeria속, Microsphaeropsis속, Penicillium속, Peyronellaea속, Phoma속, Pseudeurotium속, Rhizomucor속, Talaromyces속, Trematosphaeria속, Zalerion속 등이 분리되었다. 5종류의 수생식물에서 Alternaria, Talaromyces속의 균류들이 비교적 많이 분포하고 있었다. 본 연구는 낙동강 지류의 하천 습지에 자생하는 수생식물 군락에서 공생하는 내생균류의 다양성에 대한 연구이다.

관상식물(觀賞植物)의 진균병(眞菌病) 발생조사(發生調査) (II) (Survey on Fungal Diseases of Ornamental Plants (II))

  • 김지영;이준탁
    • Current Research on Agriculture and Life Sciences
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    • 제3권
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    • pp.120-128
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    • 1985
  • 대구(大邱)를 중심(中心)으로 한 5개(個) 지역(地域)에 재식(裁植)되어 있는 23과(科) 28속(屬) 32종(種)의 관상식물(觀賞植物)에 대(對)하여 진균(眞菌)에 이병(罹病)된 식물(植物)을 조사(調査)한 결과(結果) Uncinula 속균(屬菌) 등(等) 21속(屬)의 병원진균(病原眞菌)에 의(依)하여 26속(屬) 30(種)의 식물(植物)에서 45종(種)의 병(病)이 발생(發生)하고 있었다. 이들 중(中) 우리나라에서 이제까지 보고(報告)되지 않은 미기록병해(未記錄病害)는 Uncinula속균(屬菌), Phyllosticta속균(屬菌), Discosia속균(屬菌), Macrophoma속균(屬菌), Colletotrichum속균(屬菌), Pestalotia속균(屬菌), Phomopsis속균(屬菌), Gloeosporium속균(屬菌), Alternaria속균(屬菌), Fusicoccum속균(屬菌) 및 Sphaceloma속균(屬菌) 등(等)에 의(依)하여 15속(屬) 16종(種)의 식물(植物)에 22종(種)의 병(病)이 발생(發生)하고 있었다.

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황사 이동 경로에 따른 대기 부유 곰팡이 포자의 변화 (Variations of Airborne Fungal Spore Composition due to the Asian Dust Trajectories)

  • 김종호;여환구
    • 한국대기환경학회지
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    • 제20권1호
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    • pp.69-76
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    • 2004
  • Asian Dust samples were collected in the ambient air of Seosan, Western Korea, in spring of 2000∼2002. PM (Particulate Matter) concentrations were 199,8$\mu\textrm{g}$/㎥ in the first Asian Dust period (March, 23∼24) and 249.4$\mu\textrm{g}$/㎥ in the second period (April, 7∼9) of 2000. Compared with the concentrations in 2000, relatively low PM concentrations, 157.3$\mu\textrm{g}$/㎥ were measured in the periods of 2001 (April, 24∼26). Especially high PM concentration 953.1$\mu\textrm{g}$/㎥ were measured in the periods of 2002 (March, 21∼22). The variation in the PM concentration was observed according to the time for the formation of Asian dust. Considering the particle size distributions of Asian dust, a high concentration was also observed in coarse particle region. The results of backward trajectory model showed the route of the dust storms from northern area of Mongol and Gobi desert. Various mycelia grown from fungal spores were observed on the PM samples and identified at the genus level. All the genera from the three years (2000∼2002), Fusarium, Aspergillus, Penicillium, Basipetospora, Epicoccum and Monotospora are hyphomycetes in the division Fungi imperfecti (Deuteromycota). Fungal composition on the dust sample in March, 2000 was similar to the result of March, 2002. However, the result of April, 2001 was obviously different from the other dust periods. The variations of fungal compositions between the dust periods could be caused by the trajectories of the dust storms.

Composition and Size Variation of Airborne Fungal Spores in the Asian Dust Events (2000 ~ 2001)

  • Yeo, Hwan-Goo;Kim, Jong-Ho
    • 환경생물
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    • 제20권4호
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    • pp.294-299
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    • 2002
  • PM (Particulate Matter) samples contained fungal spores were collected in the ambient air of Seosan, west Korea, in springtime of 2000 and 2001. PM concentrations were $199.8\mu{g}\;m^{-3}$ in the 1st Asian Dust Storm period (March, 23 ~ 24) and $249.4\mu{g}\;m^{-3}$ in the 2nd period (April, 7~9), 2000. Compared with the concentrations in 2000, relatively low PM concentration ($157.3\mu{g}\;m^{-3}$ ) was measured in the Asian Dust Storm period (April, 24 ~ 20) of 2001. Although there were somewhat differences for the total PM concentrations among the three periods, majorities of the PM were composed of coarse particles sized about 5 ~ 6 $\mu{m}$ over the periods of the two years. Diverse molds grown from fungal aerosols were observed in the PM samples and identified at the genus level. All the genera, Fusarium, Aspergillus, Penicillium, Basipetospora, Epicoccum and Monotospora are hyphomycetes in the division Fungi imperfecti (Deuteromycota). Especially, morphologically more diversified mycelia of hyphomycetes were grown on the fine PM sample (1.1 ~ 2.1 $\mu{m}$) than coarse PM samples in the periods of 2000. Furthermore, some molds were grown on even the background PM sample less than 0.43 $\mu{m}$ in the period of 2001. It was thought that some kinds of ultra fine sized fungal spores were transported by the Asian Dust Storm and suspended in the ambient air of study area during the events.

Diversity of Fungi from Dokdo Island Soil, Korea and Their Antimicrobial and Hydrolytic Enzyme Activity

  • Lee, Hye Won;Lee, Hyang Burm
    • 한국균학회소식:학술대회논문집
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    • 한국균학회 2014년도 추계학술대회 및 정기총회
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    • pp.47-47
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    • 2014
  • Dokdo island is located in the northeastern part of Ulleungdo, known as volcanic island. In total, 53 fungal isolates were isolated from Dokdo island soil sample, using dilution plate technique. The isolates were identified on the basis of morphological characteristics and rDNA ITS sequence analysis. Out of them, 41 isolates were identified at the level of species. The dominant fungal species and genera included Fusarium spp., Mucor sp., Clonostachys spp., and Trichoderma sp. The % sequence identity (the number of matches/the complete alignment length) values via NCBI BLAST searching of EML-IF9, EML-MF30-1 and EML-DDSF4 represented 97.19% (485/499) with Clonostachys cf. rosea (GenBank accession no. KC313107), 98.33% (472/480) with Metarhizium guizhouense (GenBank accession no. HM055445), and 100% (350/350) with Mortierella oligospora (GenBank accession no. JX976032), respectively. Three species of C. rosea, M. guizhouense and M. oligospora represented new records of fungi from Dokdo island, Korea. The antimicrobial activities of the fungal strains varied with tested. Two isolates (EML-MFS30-1 and EML-IF9) showed antifungal activity against several fungi including Fusarium oxysporum and Rhizotonia solani. Clonostachys rosea (EML-IF9) showed strong hydrolytic enzyme activity. Our results showed that the antagonistic fungi including Clonostachys rosea will be used as potential biocontrol agents for control of fungal diseases.

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Diversity and Distribution of Bulb-associated fungi of Fritillaria Cirrhosae Bulbus Source Plants used in Traditional Chinese Medicine

  • Gao, Qian;Dong, Fawu;Xiang, Jianying
    • 한국균학회지
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    • 제48권3호
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    • pp.251-271
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    • 2020
  • Diversity and community composition of bulb-associated fungi of Fritillaria Cirrhosae Bulbus source plants, which are used in traditional chinese medicine, in the eastern Himalaya-Hengduan Mountains, southwestern China, were estimated based on the internal transcribed spacer rDNA sequence analysis, using host plant species, geographic area, and plant phenology as variables. A total of 1,486 fungal sequences assigned to 251 operational taxonomical units (OTUs) were obtained from the bulbs. Fungal OTUs comprised 96.41% Ascomycotina, 3.52% Basidiomycotina, and 0.07% Zygomycotina. Sordariomycetes, Hypocreales, and Nectriaceae were the most frequent fungal lineages at each taxonomic rank. Fusarium, Ilyonectria, Tetracladium, Leptodontidium, and Tomentella were the top OTU-rich genera. Fusarium sp. 03, Ilyonectria rufa, Fusarium sp. 08, Ilyonectria sp. 03, and Leptodontidium orchidicola 03 represented the most frequent OTUs. Fusarium spp. were the most frequent general taxa. The distribution of fungal community exhibited preferences for host plant species, geographic area, and plant phenology. These findings are the foundation of our research on culturing and active metabolites of bulb-associated fungi of Fritillaria Cirrhosae Bulbus source plants.

Comparison of Soil Higher Fungal Communities between Dead and Living Abies koreana in Mt. Halla, the Republic of Korea

  • Kim, Chang Sun;Jo, Jong Won;Lee, Hyen;Kwag, Young-Nam;Cho, Sung Eun;Oh, Seung Hwan
    • Mycobiology
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    • 제48권5호
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    • pp.364-372
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    • 2020
  • To improve our understanding of the relationship between soil higher fungi (belonging to Ascomycota and Basidiomycota) and Abies koreana, we surveyed A. koreana soil fungal communities in a forest in Mt. Halla, Jeju Island, Korea by next-generation sequencing (Illumina Miseq). To confirm the soil higher fungal communities, we collected two types of soils from a defined plot: soils with dead (AKDTs) and living A. koreana (AKLTs), respectively. Soil fungi were classified into 2 phyla, 19 classes, 64 orders, 133 families, 195 genera, and 229 OTUs (895,705 sequence reads). Nonmetric multidimensional scaling (NMDS) showed significantly different soil higher fungal communities between AKDTs and AKLTs (p < .05). In addition, the saprophyte composition was significantly affected by A. koreana status (p < .05). The proportion of the mycorrhizal Clavulina spp. was different between soils with AKDTs and AKLTs, suggesting that Clavulina spp. may be a crucial soil fungal species influencing A. koreana. This study will lead to a better understanding of the ecological status of A. koreana in Mt. Halla. In addition, this study could be useful for the conservation and management of A. koreana habitats.