• Journal of Forest and Environmental Science
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• v.24 no.2
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• pp.61-68
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• 2008

Acrylamide is present as a contaminant in heated food products, predominantly from the precursor asparagine. Nonanchored inter simple sequence repeats (ISSRs) are arbitrary multiloci markers produced by PCR amplification with a microsatellite primer. In order to assess the feasibility of microsatellite primers as markers for DNA damage, the study was conducted on common bean (Phaseolus vulgaris L.) exposed to different concentrations of acrylamide. Polymorphisms were abundant among plant samples treated with acrylamide in comparison to control (untreated one) tested with 4- tri-nucleotide, 2 tetra-nucleotide, and 3- dinucelotide primers. The primer (CCG)4 was the best tested primer to generate polymorphism between the DNA of plants treated or not by acrylamide. Polymorphisms became evident as the presence and absence of DNA fragments in treated samples compared with the untreated one. The highest number of DNA variation on ISSR patterns was observed at the micromollar concentrations of acrylamide. Acrylamide was able to induce DNA damage in non concentration-dependent manner with effectiveness at micromollar concentrations. This study demonstrated that ISSR markers can be highly reliable for identification of DNA damage induced by acrylamide.

• Research in Plant Disease
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• v.16 no.3
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• pp.219-223
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• 2010

Recently, the oak wilt diseases especially on Quercus mongolica, have been increasing in various districts of Korea. A collection of 38 strains of the oak wilt pathogen Raffaelea qeurcus-mongolicae and R. quecivora isolated from Quercus spp. in Korea and Japan was characterized by $\beta$-tubulin gene sequence and randomly amplified polymorphic DNA (RAPD) analysis. In cluster analysis based on $\beta$-tubulin gene sequence the strains were divided into 4 clusters, of which clusters 2 and 4 were composed of Japanese strains except for one Korean strain. RAPD analysis showed that they were also effectively differentiated by a strong RAPD fragments. On the basis of the two genetic analysis, significant differences were detected between Korean strains and Japanese strains.

• The Korean Journal of Mycology
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• v.33 no.2
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• pp.98-102
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• 2005

In 2003 to 2005, the root rot of Japanese angelica (Aralia elata) was surveyed in nursery beds of Korea, where incidence of the disease often reached up to 100%. Three isolates were obtained from the infected roots, and identified as Phytophthora cactorum on the basis of cultural, morphological characteristics and molecular analysis. The isolates were characterized by having markedly papillate and broadly ovoid deciduous sporangia. The optimum temperature for mycelium growth was at $25^{\circ}C$ on V8 juice agar. Pathogenicity of the isolates was confirmed by soil mixture inoculation. Approximately 900 bp of ITS rDNA was amplified from all 3 isolates and band pattern of restriction fragments observed by Alu I, Msp I, and Taq I digestion also supported the result of the morphological identification when compared with PhytID database.

• Journal of the Korean Wood Science and Technology
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• v.44 no.3
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• pp.424-429
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• 2016

In this study, the carbonized boards were manufactured from different types of wood-based panel and then their moisture absorption/desorption properties were investigated and compared. The carbonization temperature was maximum $600^{\circ}C$ with 2 h maintains. Test results showed higher absorption/desorption capacity on carbonized plywood than carbonized MDF, PB, and OSB, respectively. However, carbonized MDF, OSB, and plywood had similar absorption/desorption rate per hour. It means carbonized OSB and plywood can transfer moisture into deeper side and then possibly hold more amount of water. Based on SEM images, carbonized OSB and plywood showed more like wood structure, while carbonized MDF and PB had only wood fiber or/and chunk of wood fragments. Therefore, original wood structure may affect moisture absorption/desorption capacity. In order to manufacture high moisture absorbing/desorbing carbonized board, wood structure should be considered and then carbonized.

• Journal of Korea Technical Association of The Pulp and Paper Industry
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• v.44 no.2
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• pp.58-66
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• 2012

Brewers grain is a byproduct of beer brewing and consists primarily of grain husks, pericarp, and fragments of endosperm. Although this material is consumed by animals and used as fertilizer, a large amount of brewers grain is simply discarded. Therefore, new methods for utilizing this fibrous resource should be pursued. In this study, we examined the potential utilization of brewers grain as an additive in the paperboard industry by determining the chemical composition of brewers grain and the physical properties of brewers grain powders after grinding with two types of grinders. We found that brewers grain had a lower holocellulose content and higher lignin content and intermediate ash content when compared to other biomass materials, and did not contain any contaminants that would interfere with the papermaking process. Particles had a higher fiber length, less fiber width, and narrower shape factor distribution when ground by a blender type grinder than by a pin crusher type grinder. The blender type grinder was concluded to make regular brewers grain particles appropriate for papermaking.

• Korean Journal of Agricultural Science
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• v.48 no.3
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• pp.493-503
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• 2021

Tricholoma matsutake (Pinus mushroom, PM) is one of the most valued ectomycorrhizal fungi in Asia because it is an expensive forest product with a unique flavor and taste. Therefore, many studies have tried to successfully cultivate Tricholoma matsutake artificially in Korea and other countries. However, its physiological and ecological characteristics are still unknown. Thus, we need to understand the diversity and clusters of microorganisms related to Tricholoma matsutake and to identify their core microorganisms related to their growth and production. In this study, we obtained an average of 11,661 fragments from three pine mushrooms with metagenome (an assemblage of genes of all microorganisms in the natural world) analysis from a pine forest located in Pohang, Gyeongsang-Bukdo. Of these, the valid reads were on average 5,073 per sample available for analysis, and the average length of a read was 456 bp. There were an average of 33.3 phyla in the metagenome analysis. Firmicutes phylum made up on an average 46% of the phyla and was dominant among the phyla. The next dominant phylum was Proteobacteria at 27% followed by Bacteroidetes at 17%, Actinobacteria at 5% and Verrucomicrobia at 2%. The Proteobacteria phylum consisted of the γ-proteobacteria class at 54% followed by β-proteobacteria at 37%, α-proteobacteria at 6%, δ-proteobacteria at 2% and ζ-proteobacteria at 0%. The metagenome consisted of the Ruminococcaceae family at 17% followed by Pseudomonadaceae at 13%, Burkholderiaceae at 7%, Bacteroidaceae at 7%, Lachnospiraceae at 7% and Clostridiaceae at 6%.

• The Korean Journal of Mycology
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• v.29 no.2
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• pp.99-103
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• 2001

Genetic variation of the wild strains of Lentinula edodes[(Berk.)Pegler] in three regions of Korea was investigated by analyzing random amplified polymorphic DNA (RAPD) markers. A total of 32 strains of L. edodes were collected from Mt. Kyebang (10 strains), Mt. Odae (11), and Mt. Jiri (11), respectively. The genomic DNA was amplified by polymerase chain reaction (PCR) using an arbitrary 10-mer primer. A total of 170 amplified fragments were observed, of which 161 fragments were polymorphic. The results of cluster analysis, performed on the basis of the presence or absence of amplified fragments of the same size, revealed that strains collected from both Mt. Kyebang and Mt. Odae in a single group. AMOVA analysis revealed that genetic variations between sites amounted to 12.5%, while 87.1% of total variations was explained by variations among strains within sites. Relatively high genetic relationships among the strains of Mt. Kyebang and Mt. Odae, which were high variance within populations. Whereas, all the strains of Mt. Jiri, which were low variance among populations from both Mt. Kyebang and Mt. Odae, which resulted in genetic isolation of the strains in Mt. Jiri.

• Mycobiology
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• v.41 no.2
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• pp.86-93
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• 2013

Sequence characterized amplified region (SCAR) markers are one of the most effective and accurate tools for microbial identification. In this study, we applied SCAR markers for the rapid and accurate detection of Phytophthora katsurae, the casual agent of chestnut ink disease in Korea. In this study, we developed seven SCAR markers specific to P. katsurae using random amplified polymorphic DNA (RAPD), and assessed the potential of the SCAR markers to serve as tools for identifying P. katsurae. Seven primer pairs (SOPC 1F/SOPC 1R, SOPC 1-1F/SOPC 1-1R, SOPC 3F/SOPC 3R, SOPC 4F/SOPC 4R, SOPC 4F/SOPC 4-1R, SOPD 9F/SOPD 9R, and SOPD 10F/SOPD 10R) from a sequence derived from RAPD fragments were designed for the analysis of the SCAR markers. To evaluate the specificity and sensitivity of the SCAR markers, the genomic DNA of P. katsurae was serially diluted 10-fold to final concentrations from 1 mg/mL to 1 pg/mL. The limit of detection using the SCAR markers ranged from $100{\mu}g/mL$ to 100 ng/mL. To identify the limit for detecting P. katsurae zoospores, each suspension of zoospores was serially diluted 10-fold to final concentrations from $10{\times}10^5$ to $10{\times}10^1$ zoospores/mL, and then extracted. The limit of detection by SCAR markers was approximately $10{\times}10^1$ zoospores/mL. PCR detection with SCAR markers was specific for P. katsurae, and did not produce any P. katsurae-specific PCR amplicons from 16 other Phytophthora species used as controls. This study shows that SCAR markers are a useful tool for the rapid and effective detection of P. katsurae.

• The Korean Journal of Quaternary Research
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• v.17 no.2
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• pp.17-23
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• 2003

In Korea terrestrial fluvial sequences can be used as pedological and sedimentological markers indicating a millenium-scale environmental and climatic changes imprinted in fluvial sub-environments, which in turn are represented by the cyclicity of fluvial sands, backswamp organic muds, and flooding muds intercalations of frostcracked or dessicated brown paleosols. Post LGM and Holocene fluvial and alluvial sedimentary sequences of Korea are formed in such landscapes of coastal, floodplain, backswamp and hillslope areas. Among them, the most outstanding depositional sequences are fluvial gravels, sands and organic mud deposits in coastal, fluvial, or alluvial wetlands. The aim of this study is to explain the sedimentary sequences and palynofloral zones since the last 15,000years, on the basis of organic muds layers intercalated in fluvial sand deposits. Jangheung-ri site of Nam river, Soro-ri site of Miho river, Youngsan rivermouth site in Muan, Oksan-ri site of Hampyeong and Sanggap-ri site of Gochang are illustrated to interpret their sedimentary facies, radiocarbon datings, and palynofloral zonation. Up to the Middle to Late Last Glacial(up to 30-35Ka), old river-bed, flooding, and backswamp sequences contain such arboreal pollens as Pinus, Abies, and Picea, and rich in non-arboreal pollens like Cyperaceae, Gramineae, Ranunculaceae, and Compositae. During the LGM and post-LGM periods until Younger Dryas, vegetation has changes from the sub-alpine conifer forest(up to about 17-11Ka), through the conifer and broad-leaved deciduous forest, or mixed forest (formed during 16,680-13,010yrB.P), to the deciduous and broad-leaved forest (older than 9,500yrB.P). In the Earliest Holocene flooding deposits, fragments of plant roots are abundant and subjected to intensive pedogenic processes. During Holocene, three arboreal pollen zones are identified in the ascending order of strata； Pinus-Colyus zone(mixed conifer and deciduous broad-leaved forest, about up to 10Ka), Alnus-Quercus forest (the cool temperate deciduous broad-leaved forest, about 10Ka-2Ka), and Pinus forest (the conifer forest, about after 2Ka), as examplified in Soro-ri site of Cheonwon county. The palynological zonations of Soro-ri, Oksan-ri, Sanggap-ri, Youngsan estuary, and Gimhae fluvial plain have been recognized as a provisional correlation tool, and zonations based on fluvial backswamp and flooding deposits shows a similar result with those of previous researchers.

• Journal of Plant Biology
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• v.25 no.1
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• pp.37-53
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• 1982

Pollen analysis from lake districts, Youngnangho, Wolhamji and Bangeojin, revealed vegetational patterns in Korea. The pollen stratigraphy was divided into five zones, zone L, I, II, IIIa and IIIb for the past 15,000 years. During zone L (earlier than 10,500 yr BP), late-glacial period, Youngnangho was vegetated with a coniferous forest dominated by spruce, larch, haploxylon pine and fir with considerable amount of herbs. Zone I(10,500~7500 yr BP) was predominantly herbaceous vegetationj with significant amount of oak and diploxylon pine. It suggests that the overall environment became milder and drier than late-glacial period. Zone II(7,500~4,000 yr BP), hypsithermal period, showed significant warming condition, indicated by high pollen concentrations of oak, diploxylon pine and hornbeam, and by more diverse flora of deciduous broad-leaved trees than before. Herbs were not an important part of vegetation. Zone III$^a$(4,000~1,500 yr BP) had pine and oak as main elements. Birch increased slightly while hornbeam decreased in this time. It indicates cooling condition. Zone III$^b$(1,5000-present) which can be called pine period showed obvious human interference. Following forest clearance, agriculture was intensified. The beginning of logging and agriculture was discernible by a sudden decline of arboreal species and by considerable amount of rice, buckwheat, sorrel and plantain. Numerous charcoal fragments were observed in zone I and zone III$^b$.