• Title/Summary/Keyword: Focal species

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Regional Ecological Network Design for Wild Animals' Movement Using Landscape Permeability and Least-cost Path Methods in the Metropolitan Area of Korea (경관투과성 및 최소비용경로 분석을 통한 수도권 지역의 광역생태축 구축 연구)

  • Lee, Dong-Kun;Song, Won-Kyong;Jeon, Seong-Woo
    • Journal of the Korean Society of Environmental Restoration Technology
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    • v.11 no.3
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    • pp.94-106
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    • 2008
  • As populations inhabiting in natural ecosystem are fragmented by artificial barriers and habitats are destructed by development, extinction possibility of species is getting higher. It is necessary to design and to manage conservation areas and corridors considering animals' movement and migration for sustainable species diversity in present circumstances. 'Least-cost modeling' is one commonly employed approach in which dispersal costs are assigned to distinct habitat types and the last-costly dispersal paths among habitat patches are calculated using a geographical information system (GIS). This study aims to design ecological corridor using least-cost path method and to apply it to a regional ecological network considering movability of medium-large size mammals. This study was carried out over the metropolitan area, which has been deforested by rapid urbanization. Nevertheless there is connected with Gangwon province, Baekdudaegan mountain range and DMZ, considered where many forest species can migrate to this region. This study employs such an approach to develop least-cost path models for medium-large size mammals, have inhabited for this entire region. Considering those species, two forest areas as a source of species supply and forest areas more than 1,000ha are selected as focal forest areas. Movement and migration paths from species supply sources to focal forest areas are calculated by applying landscape permeability theory using land cover map, road density map and land slope map. Results showed least-cost paths from species supply sources to focal forest areas on two species. Wildcat and roe deer are different in some least-cost paths caused by their landscape permeability but paths show generally same specifics. The result of considering regional distribution of expected movement and migration paths to regional ecological network, low altitude mountains of western metropolitan area are evaluated important area for species connectivity. In national or regional levels ecological connectivity is essential to promote species diversity and to preserve integrated ecosystem. This study concludes that developing least-cost models from similar empirical data could significantly improve the utility of these tools.

Wild Bird Sound Classification Scheme using Focal Loss and Ensemble Learning (Focal Loss와 앙상블 학습을 이용한 야생조류 소리 분류 기법)

  • Jaeseung Lee;Jehyeok Rew
    • Journal of Korea Society of Industrial Information Systems
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    • v.29 no.2
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    • pp.15-25
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    • 2024
  • For effective analysis of animal ecosystems, technology that can automatically identify the current status of animal habitats is crucial. Specifically, animal sound classification, which identifies species based on their sounds, is gaining great attention where video-based discrimination is impractical. Traditional studies have relied on a single deep learning model to classify animal sounds. However, sounds collected in outdoor settings often include substantial background noise, complicating the task for a single model. In addition, data imbalance among species may lead to biased model training. To address these challenges, in this paper, we propose an animal sound classification scheme that combines predictions from multiple models using Focal Loss, which adjusts penalties based on class data volume. Experiments on public datasets have demonstrated that our scheme can improve recall by up to 22.6% compared to an average of single models.

Linking Species with the Ecosystem: The Emergence of Big Data and Artificial Intelligence in Ecological Research

  • Ohseok Kwon
    • Proceedings of the National Institute of Ecology of the Republic of Korea
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    • v.4 no.4
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    • pp.135-140
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    • 2023
  • The intricate relationship between species and their ecosystems has been a focal point of ecological research for decades. With the advent of big data and artificial intelligence, we are now able to explore this relationship with unprecedented depth and precision. This review delves into the transformative role of these technologies in ecological research, emphasizing their potential to enhance our understanding of species-ecosystem linkages.

Role of phospholipase D and osteopontin in reactive glial cells after transient forebrain ischemia

  • Kim, Seong-Yun
    • Proceedings of the Korean Society of Applied Pharmacology
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    • 2000.04a
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    • pp.15-16
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    • 2000
  • Transient forebrain ischemia results in delayed neuronal death in the CA1 region of the hippocampus after injury, which is, at least in part, a consequence of excessive generation of reactive oxygen species. Previous in vitro studies using cell cultures or brain slices have demonstrated that phospholipase D (PLD) in the nervous system is involved in the signaling mechanism in response to a variety of agonists. Several recent studies have shown that reactive oxygen species stimulate phospholipase D (PLD) activity in several kinds of cells. Therefore, this raises the possibility that PLD activity is enhanced in the ischemic brain. Meanwhile, osteopontin (OPN) was initially identified as a sialoglycoprotein in bone, but has since been found in various tissues. Although not much is known about its function, OPN seems to play an important role in inflammation and tissue repair. Recently, it was reported that OPN was upregulated in the activated microglia after focal brain ischemia, suggesting that OPN might play a role in wound healing after a focal stroke.

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Winter foraging of endangered Red-crowned and White-naped crones in the Korean Demilitarized Zone(DMZ)

  • Lee, Sang-Don;Jablonski, P.;Higuchi, H.
    • Proceedings of the Korean Society of Environment and Ecology Conference
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    • 2007.04a
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    • pp.176-177
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    • 2007
  • We determined how presence of heterospecific individuals in the vicinity of a focal individual affects the behavior of two critically endangered species of cranes on their wintering grounds at Cheolwon in the Korean Demilitarized Zone(DMZ). The Red-crowned crane, Grus japonensis, is larger than the White-naped crane, Grus vipio, and it dominates the White-naped crane in aggressive interactions. We showed that the dominant species increases foraging activity in the presence of the subordinate species presumably because of scrounging of the food from the subordinate. Because interspecific interactions may affect avian endangerments this behavioral findings should be taken into account when managing winter refuges for the two engendered crane species.

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Protective Effect of PineXol® on Hydrogen Peroxide-induced Apoptosis on SK-N-MC Cells and Focal Ischemia Rodent Models (파인엑솔이 과산화수소로 유도된 SK-N-MC 세포와 뇌졸중 백서 모델에서의 보호효과)

  • Hong, Soon-O;Han, Kyung-Hoon;Lee, Seung-Hee;Kim, Doh-Hee;Song, Kwan-Young;Han, Sung-Hee
    • The Korean Journal of Food And Nutrition
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    • v.29 no.6
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    • pp.923-929
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    • 2016
  • The purpose of this study was to evaluate the protective effect of $PineXol^{(R)}$ on $H_2O_2$-induced cell death in SK-N-MC cells, and in early stage focal ischemia rodent model. SK-N-MC cells were pre-treated with $200{\mu}M$ $H_2O_2$ or various concentrations of $PineXol^{(R)}$ (10, 30, and 50 pg/mL) for 24 h, and then exposed to $H_2O_2$ for 3 h. Cell death was assessed by the CCK-8 assay, reactive oxygen species (ROS) assay, and lactate and dehydrogenase (LDH) release assay. Superoxide dismutase (SOD), catalase (CAT), and glutathione peroxidase (GPx) expressions were also analyzed by western blotting. Focal ischemia rodent model was used as the in vivo model, and different concentrations of $PineXol^{(R)}$ (1, 10, and 100 mg/kg) were administered. One week after administration, reduction of infarct volume was analyzed by TTC staining. Cell viability of $H_2O_2$-treated SK-N-MC cells significantly increased by pre-treatment of $PineXol^{(R)}$ (p<0.05). $PineXol^{(R)}$ pre-treatment also induced significant decrease of ROS and LDH expressions. However, $PineXol^{(R)}$ did not affect the infarct volume. These results suggest that $PineXol^{(R)}$ has significant neuroprotective effect in vitro, but statistical significance was not confirmed in the in vivo focal ischemia model.

Egg Rejection by Both Male and Female Vinous-throated Parrotbills Paradoxornis webbianus

  • Lee, Jin-Won;Kim, Dong-Won;Yoo, Jeong-Chil
    • Animal cells and systems
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    • v.9 no.4
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    • pp.211-213
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    • 2005
  • In bird species that suffer brood parasitism, the question about which sex is responsible for egg rejection has important implications for determining the coevolutionary relationship between brood parasites and their hosts. In order to determine which sex rejects a parasitic egg in vinous-throated parrotbills (Paradoxornis webbianus) which have egg color dimorphism, we conducted model egg experiments and video-recorded the behavior of the focal pair. Both sexes showed rejection behavior to the parasitic eggs. It indicates that the vinous-throated parrotbill may have a high rejection rate and faster spread of any rejection alleles through out populations. However, further studies are still needed to confirm the egg recognition mechanism in this species, which will expand our knowledge of the evolutionary relationship between host and parasite.

The Selection of Suitable Site for Park and Green Spaces to Increase Accessibility and Biodiversity - In Case of Seongnam City - (접근성과 생물다양성 증진을 고려한 도시 공원·녹지의 필요지역 선정 - 성남시를 사례로 -)

  • Heo, Hankyul;Lee, Dong Kun;Mo, Yongwon
    • Journal of the Korean Society of Environmental Restoration Technology
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    • v.18 no.5
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    • pp.13-26
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    • 2015
  • Urban park and green space provide various functions. Among the functions, human benefit and increase of biodiversity are known to be important. Therefore, it is important to consider human and biotic aspect in the process of selecting suitable site for park and green space. However, there is insufficient research on both aspects. In this study, we used green network to analyze human and biotic aspect to select suitable site for park and green space in Seongnam City in Korea. To analyze the green network, we used accessibility for human aspect and used dispersal distance and habitat size for biotic aspect. We conducted least-cost path modelling using movement cost. In case of biotic aspect, GFS (generic focal species) is used to estimate habitat size and dispersal distance. To find out suitable site for park and green space, we used an overlay analysis method. As the result, old residential areas are shown have insufficient green network which needs park and green space. Furthermore, the green network for biotic aspect is insufficient in old residential areas comapred to green network for human aspect. The result of this study could contribute in planning of park and green space to maximize their functions.

The Effects of Methanol Extract from Cheonggukjang in T98G Cells and Early Stage of Focal Ischemia Rodent Models (청국장 메탄올 추출물이 T98G 세포와 허혈성 뇌졸중 백서에 미치는 영향)

  • Han, Kyung-Hoon;Kim, Doh-Hee;Song, Kwan-Young;Lee, Seog-Won;Han, Sung-Hee
    • The Korean Journal of Food And Nutrition
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    • v.28 no.6
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    • pp.965-972
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    • 2015
  • This study was conducted to evaluate the neuroprotective effects of Cheonggukjang extract in in-vitro and in-vivo models. T98G-human glioblastoma cells were pretreated with various concentrations (1~10 mg/mL) of Cheonggukjang extract for 24 h and then exposed to $H_2O_2$ (1 mM) for 3 h. The neuroprotective effects of Cheonggukjang extract were measured using a CCK-8 kit assay, total antioxidant capacity (TAC) assay, reactive oxygen species (ROS) assay, and lactate dehydrogenase (LDH) release assay. The early stage focal ischemia rodent model was used as the in-vivo neurotoxicity model. Various concentrations (10~200 mg) of Cheonggukjang extract were administered to the animal models for 1 week. Peripheral blood was analyzed for glutathione peroxidase (GPx) expression by ELISA, and infarct volume reduction was analyzed by TTC staining. Cheonggukjang extract significantly (p<0.05) increased cell viability in T98G cells against $H_2O_2$ as well as against the induced neurotoxicity. Indeed, treatment with the Cheonggukjang extract induced a decrease in ROS and LDH expression and increased TAC significantly (p<0.05). However, Cheonggukjang extract did not induce a decrease in infarct volume or an increase in GPx expression in the in-vivo model. Despite the limitation in neuroprotection, Cheonggukjang extract may be useful for treating ROS injury.

The Neuroprotective Effects of Carnosine in Early Stage of Focal Ischemia Rodent Model

  • Park, Hui-Seung;Han, Kyung-Hoon;Shin, Jeoung-A;Park, Joo-Hyun;Song, Kwan-Young;Kim, Doh-Hee
    • Journal of Korean Neurosurgical Society
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    • v.55 no.3
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    • pp.125-130
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    • 2014
  • Objective : This study was conducted to elucidate neuroprotective effect of carnosine in early stage of stroke. Methods : Early stage of rodent stroke model and neuroblastoma chemical hypoxia model was established by middle cerebral artery occlusion and antimycin A. Neuroprotective effect of carnosine was investigated with 100, 250, and 500 mg of carnosine treatment. And antioxidant expression was analyzed by enzyme linked immunosorbent assay (ELISA) and western blot in brain and blood. Results : Intraperitoneal injection of 500 mg carnosine induced significant decrease of infarct volume and expansion of penumbra (p<0.05). The expression of superoxide dismutase (SOD) showed significant increase than in saline group in blood and brain (p<0.05). In the analysis of chemical hypoxia, carnosine induced increase of neuronal cell viability and decrease of reactive oxygen species (ROS) production. Conclusion : Carnosine has neuroprotective property which was related to antioxidant capacity in early stage of stroke. And, the oxidative stress should be considered one of major factor in early ischemic stroke.