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Distribution and Frequency of SSR Motifs in the Chrysanthemum SSR-enriched Library through 454 Pyrosequencing Technology (국화 SSR-enriched library에서 SSR 반복염기의 분포 및 빈도)

  • Moe, Kyaw Thu;Ra, Sang-Bog;Lee, Gi-An;Lee, Myung-Chul;Park, Ha-Seung;Kim, Dong-Chan;Lee, Cheol-Hwi;Choi, Hyun-Gu;Jeon, Nak-Beom;Choi, Byung-Jun;Jung, Ji-Youn;Lee, Kyu-Min;Park, Yong-Jin
    • Journal of the Korean Society of International Agriculture
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    • v.23 no.5
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    • pp.546-551
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    • 2011
  • Chrysanthemums, often called mums or chrysanths, belong to the genus Chrysanthemum, which includes about 30 species of perennial flowering plants in the family Asteraceae. We extracted DNA from Dendranthema grandiflorum ('Smileball') to construct a simple sequence repeat (SSR)-enriched library, using a modified biotin-streptavidin capture method. GS FLX (Genome Sequencer FLX System which provides the flexibility to perform the broad range of applications) sequencing (at the 1/8 run specification) resulted in 18.83 mega base pairs (Mbp) with an average read length of 280.06 bp. Sequence analyses of all SSR-containing clones revealed a predominance of di-nucleotide motifs (16,375, 61.5%) followed by tri-nucleotide motifs (6,616, 24.8%), tetra-nucleotide motifs (1,674, 6.3%), penta-nucleotide motifs (1,283, 4.8%), and hexa-nucleotide motifs (693, 2.6%). Among the di-nucleotide motifs, the AC/CA class was the most frequently identified (93.5% of all di-nucleotide types), followed by the GA/AG class (6.1%), the AT/TA class (0.4%), and the CG/GC class (0.03%). When we analyzed the distribution of different repeat motifs and their respective numbers of repeats, regardless of the motif class, of 100 SSR markers, we found a higher number of di-nucleotide motifs with 70 to 80 repeats; we also found two di-nucleotide motifs with 83 and 89 repeats, respectively, but their product lengths were within optimum size (297 and 300 bp). In future work, we will screen for polymorphisms of possible primer pairs. The results will provide a useful tool for assessing molecular diversity and investigating the population structure among and within Chrysanthemum species.

Effects of Korean Goldenbell (Forsythia koreana) Leaf on the Growth, Body Color and Hepatopancreatic Structure of Giant Freshwater Prawn (Macrobrachium rosenbergii) (큰징거미새우(Macrobrachium rosenbergii)의 성장, 체색 및 간췌장 구조에 미치는 개나리(Forsythia koreana) 잎의 영향)

  • Dong Woo Kim;Jeong Hee Yoon;Ji Eun Ha;Jeong Hee Min;Bo Ryung Park;Joon Yeong Kwon
    • Journal of Marine Life Science
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    • v.8 no.2
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    • pp.166-177
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    • 2023
  • The giant freshwater prawn (Macrobrachium rosenbergii) suffers economic losses in aquaculture facilities due to problems such as poor body color and carapace weakness. While this species is farmed on an animal-based diet, in the wild it consumes a detritus diet with a high proportion of plant matter. The plant matter they consume in the wild is not only a source of basic nutrients, but also carotenoids, which are responsible for body color. Korean goldenbell (Forsythia koreana) is a flowering tree widely distributed in Korea, and its leaves contain carotenoids comparable to yellow carrots. In this study, we investigated the effects of feeding Forsythia leaves to M. rosenbergii on their body color and health. The experimental diets were 100% commercial feed (control), CON, 80% commercial feed plus 20% Forsythia leaf powder, FP, and 80% commercial feed plus 20% unprocessed Forsythia leaves, FL, and each diet was fed to juvenile prawn with an average weight of 1.1 ± 0.2 g for 10 weeks. In terms of body color, the CON prawn were consistently clear ivory in color, while the FP and FL prawn changed from blue to dark brown as the days of rearing progressed. Survival and growth were not significantly different between CON and FP or FL. Histological comparison of the hepatopancreas revealed that the vacuole size of B cells, the constituent cells of the hepatopancreatic tubule, was significantly larger in FP and FL compared to CON. The vacuoles of B cells are responsible for the absorption and digestion of nutrients, suggesting that the supply of Forsythia leaves may have had a positive effect on the health of the M. rosenbergii. The above results show that the use of Forsythia leaves in the aquaculture of M. rosenbergii can be expected to improve body color and health without inhibiting growth.

Analyzing the Socio-Ecological System of Bees to Suggest Strategies for Green Space Planning to Promote Urban Beekeeping (꿀벌의 사회생태시스템 분석을 통한 도시 양봉 활성화 녹지 계획 전략 제시)

  • Choi, Hojun;Kim, Min;Chon, Jinhyung
    • Journal of the Korean Institute of Landscape Architecture
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    • v.52 no.1
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    • pp.46-58
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    • 2024
  • Pollinators are organisms that carry out the pollination process of plants and include Hymenoptera, Lepidoptera, Diptera, and Coleoptera. Among them, bees not only pollinate plants but also improve urban green spaces damaged by land use changes, providing a habitat and food for birds and insects. Today, however, the number of pollinating plants is decreasing due to issues such as early flowering due to climate change, fragmentation of green spaces due to urbanization, and pesticide use, which in turn leads to a decline in bee populations. The decline of bee populations directly translates into problems, such as reduced biodiversity in cities and decreased food production. Urban beekeeping has been proposed as a strategy to address the decline of bee populations. However, there is a problem asurban beekeeping strategies are proposed without considering the complex structure of the socio-ecological system consisting of bees foraging and pollination activities and are therefore unsustainable. Therefore, this study aims to analyze the socio-ecological system of honeybees, which are pollinators, structurally using system thinking and propose a green space planning strategy to revitalize urban beekeeping. For this study, previous studies that centered on the social and ecological system of bees in cities were collected and reviewed to establish the system area and derive the main variables for creating a causal loop diagram. Second, the ecological structure of bees' foraging and pollination activities and the structure of bees' ecological system in the city were analyzed, as was the social-ecological system structure of urban beekeeping by creating an individual causal loop diagram. Finally, the socio-ecological system structure of honey bees was analyzed from a holistic perspective through the creation of an integrated causal loop diagram. Citizen participation programs, local government investment, and the creation of urban parks and green spaces in idle spaces were suggestedas green space planning strategies to revitalize urban beekeeping. The results of this study differ from previous studies in that the ecological structure of bees and the social structure of urban beekeeping were analyzed from a holistic perspective using systems thinking to propose strategies, policy recommendations, and implications for introducing sustainable urban beekeeping.

Agricultural and Sprouts Characteristics of Mung Bean (Vigna radiata L.) Cultivated in Southern Areas According to Sowing Dates (파종시기에 따른 남부지역 재배 녹두의 생육 및 나물특성 변화)

  • Ji Ho Chu;Byeong Won Lee;Yeong Kwang Ju;Ju Seong Im;Seok Bo Song;Myeong Eun Choi;Ji Young Kim;Sang Ik Han
    • KOREAN JOURNAL OF CROP SCIENCE
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    • v.68 no.4
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    • pp.327-334
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    • 2023
  • The cultivation period of mung beans (Vigna radiata L.) in Korea has undergone recent variations. However, limited research has been conducted on pod shattering and sprout characteristics of mung beans on different sowing dates. This study aims to compare pod shattering and sprouts productivity based on different sowing dates. The research was was conducted with six different sowing dates (early May, mid-May, early June, mid-June, early July, and mid-July) in 2021 and 2022. Delayed sowing dates resulted in shortened days to germination, flowering time, and maturity time, whereas plant height, branch number, and node number increased. In addition, stem thickness and the number of pods per plant decreased. In the mung bean cultivar 'Sanpo', the pod shattering rate ranged from 10.0% to 19.3%, consistently lower than that of 'Dahyun' across all six sowing dates. The sowing date associated with the lowest shattering rate was early June. 'Sanpo' sown in early July and 'Dahyun' sown in mid-May exhibited the highest sprout production, at 871% and 750%, respectively.

Model Evaluation for Predicting the Full Bloom Date of Apples Based on Air Temperature Variations in South Korea's Major Production Regions (기온 변화에 따른 우리나라 사과 주산지 만개일 예측을 위한 모델 평가)

  • Jae Hoon Jeong;Jeom Hwa Han;Jung Gun Cho;Dong Yong Lee;Seul Ki Lee;Si Hyeong Jang;Suhyun Ryu
    • Journal of Bio-Environment Control
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    • v.32 no.4
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    • pp.501-512
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    • 2023
  • This study aimed to assess and determine the optimal model for predicting the full bloom date of 'Fuji' apples across South Korea. We evaluated the performance of four distinct models: the Development Rate Model (DVR)1, DVR2, the Chill Days (CD) model, and a sequentially integrated approach that combined the Dynamic model (DM) and the Growing Degree Hours (GDH) model. The full bloom dates and air temperatures were collected over a three-year period from six orchards located in the major apple production regions of South Korea: Pocheon, Hwaseong, Geochang, Cheongsong, Gunwi, and Chungju. Among these models, the one that combined DM for calculating chilling accumulation and the GDH model for estimating heat accumulation in sequence demonstrated the most accurate predictive performance, in contrast to the CD model that exhibited the lowest predictive precision. Furthermore, the DVR1 model exhibited an underestimation error at orchard located in Hwaseong. It projected a faster progression of the full bloom dates than the actual observations. This area is characterized by minimal diurnal temperature ranges, where the daily minimum temperature is high and the daily maximum temperature is relatively low. Therefore, to achieve a comprehensive prediction of the blooming date of 'Fuji' apples across South Korea, it is recommended to integrate a DM model for calculating the necessary chilling accumulation to break dormancy with a GDH model for estimating the requisite heat accumulation for flowering after dormancy release. This results in a combined DM+GDH model recognized as the most effective approach. However, further data collection and evaluation from different regions are needed to further refine its accuracy and applicability.

The Effect of Gibberellin Dipping Concentration and Treatment Time on the Growth of Cutting Propagules in Strawberry (딸기 삽목 육묘 시 묘 생육에 미치는 지베렐린 침지농도 및 시간의 영향)

  • Eun Ji Kim;Chi Seon Kim;Hyun Soo Jung;Jun Gu Lee
    • Journal of Bio-Environment Control
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    • v.33 no.1
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    • pp.12-21
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    • 2024
  • The aim of this research was to investigate the effect of gibberellin on improving seedling growth characteristics and enhancing strawberry quality in cutting propagation. Cuttings of the cultivar 'Seolhyang' were treated with GA3 for 30 and 60 minutes at concentrations of 50, 100, and 150 mg·L-1, with distilled water used for dipping as the control. Evaluation of seedling growth showed a positive correlation between the duration of gibberellin dipping and growth characteristics such as leaf number and SPAD value. Plant height, petiole length, leaf length and width, and leaf area varied significantly based on the interaction between dipping time and concentration. Crown diameter exhibited differences depending on the dipping time, with cuttings producing superior seedlings having a diameter of 8.0 mm or more for all treatments except the 30-minute, 100 mg·L-1 treatment. The T/R ratio was significantly lower in the 30-minute, 50 mg·L-1 treatment, indicating the highest plant vigor. Quantum yield was lower at a concentration of 150 mg·L-1, showing a decreasing trend with increasing gibberellin concentration. Nonphotochemical quenching was significantly smaller in the 30-minute, 150 mg·L-1 treatment, indicating an effective reduction of stress in the cuttings. Antioxidant content was highest in the 30-minute, 50 mg·L-1 treatment and the 60-minute, 150 mg·L-1 treatment. Moreover, the results of post-transplanting growth assessment showed no negative effect of gibberellin on flowering induction. Therefore, it was confirmed that gibberellin treatment during the cutting propagation of 'Seolhyang' strawberries had a positive effect on the production of high-quality seedlings. Dipping the cuttings in 50 mg·L-1 gibberellin for 30 minutes is considered to be the most suitable method for improving growth and quality compared to the control.

The Optimum Photoperiod on Floral Differentiation of French Marigold Grown in a Closed-type Plant Factory (완전제어형 식물공장에서 재배되는 프렌치매리골드의 화아분화를 위한 최적의 광주기 구명)

  • Nayoung Kwak;Bo Hyun Sung;K.P.S. Kumaratenna;Young-Yeol Cho
    • Journal of Bio-Environment Control
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    • v.33 no.1
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    • pp.71-78
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    • 2024
  • Among the various environmental conditions necessary for growing crops, light is closely related to the anthesis. This study aimed to determine the optimal photoperiod affecting floral differentiation in an edible flower, marigold, to efficiently cultivate the crops in a closed-type plant factory. The experiment was conducted with photoperiods of 4, 8, 12, and 16 hours. French marigold (Tagetes patula L.) 'Durango Red' seeds were sown in polyurethane sponges, and the photoperiod treatments were applied immediately. The extent of floral differentiation was examined at 2-3 day intervals, defined as the visible appearance of flower buds at least 2 mm in size. The growth parameters such as shoot fresh weight and dry weight, height, and leaf area were measured. The optimal photoperiod was determined based on the days when the floral differentiation had occurred in 50% of the total plants. In the 4-hour treatment, proper growth and flower buds did not appear. From the 8-hour treatment, the plant grew normally, and floral differentiation occurred, however, the 8-hour treatment showed the slowest floral differentiation compared to the 12 hours treatments or more. The 12- and 16-hour treatments didn't show significant differences in floral differentiation. While the 16-hour treatment exhibited the highest results in all growth parameters, it was not significantly different from the 12-hour treatment except for shoot dry weight and leaf area. According to the results, 8 hours of photoperiod induced floral differentiation. However, more time was required for flower bud formation, and plant growth was significantly lower compared to photoperiods of 12 hours or more. Considering the energy consumption and its growth, the optimal photoperiod for marigold was 12 hours.

Comparison of Seedling Quality of Cucumber Seedlings and Growth and Production after Transplanting according to Differences in Seedling Production Systems (육묘 생산 시스템 차이에 따른 오이 모종의 묘소질과 정식 후 생육 비교)

  • Soon Jae Hyeon;Hwi Chan Yang;Young Ho Kim;Yun Hyeong Bae;Dong Cheol Jang
    • Journal of Bio-Environment Control
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    • v.33 no.2
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    • pp.88-98
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    • 2024
  • This study provides basic data on the growth and production of seedlings produced in plant factories with artificial lighting by comparing seedling quality, growth and fruit characteristics, and production after transplanting cucumber seedlings according to environmental differences between plant factories with artificial lighting and conventional nurseries in greenhouse. The control group consisted of greenhouse seedlings (GH) grown in the conventional nursery before transplanting. Plant factory to greenhouse seedlings (PG) were grown for 9 days in a plant factory with artificial lighting and for 13 days in an conventional nursery. Plant factory seedlings (PF) were grown in a plant factory with artificial lighting for 22 days until planting. In terms of seedling quality, PFs had the highest relative growth rate and compactness and the best root zone development. After transplanting PFs tended to grow faster, the first harvest date was 2 days earlier than that of GHs, and the growing season ended 1 day earlier. The female flower flowering rate of the PFs was high, and the fruit set rate was of PF the lowest. The production per unit area was highest for PFs at 10.23kg Performance index on the absorption basis, the most sensitive chlorophyll fluorescence parameter, was highest at 4.14 for PFs at 4 weeks after transplantation. By comparing the maximum quantum yield of primary PS II photochemistry and dissipated energy flux per PS II reaction center electron at 4 weeks after transplantation, PFs tended to be the least stressed. PFs had the best seedling quality, growth, and production after planting, and fruit quality was consistent with that of greenhouse seedlings. Therefore, plant factory seedlings can be used in the field.

Distributional Characteristics and Population Structures of Korean Endemic Plant, Pulsatilla tongkangensis Y.N.Lee & T.C.Lee (한국특산 동강할미꽃(Pulsatilla tongkangensis Y.N.Lee & T.C.Lee)의 분포특성 및 개체군 구조)

  • Young-Chul Kim;Hyun-Hee Chae;Ji-Young Jung
    • Korean Journal of Environment and Ecology
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    • v.38 no.4
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    • pp.388-404
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    • 2024
  • The focus of conserving plant diversity at the national level includes endemic species restricted to specific regions. This study thus aimed to investigate and evaluate the current distribution status of the Pulsatilla tongkangensis Y.N. Lee & T.C. Lee, one of Korea's endemic plants. The study also examined the vegetation environment of its habitat and assessed the structure of each population. Furthermore, the performance variable of each population was comparatively evaluated, and its annual growth characteristics were also observed. The distribution area of the P. tongkangensis is largely divided into limestone cliffs, ridge rocks, mountain peaks in limestone regions, and sandy soil areas resulting from weathering. Plants in the same distribution area were categorized based on their geographical location, which reflected their respective habitats. According to the population structure evaluated using the number of measured leaves numbers, the plants were categorized into stable and relatively unstable populations. A relatively young population was observed at the top of mountains and rocky ridges of limestone areas and sandy soil areas resulting from weathering. The number of mature individuals was the highest in the population observed around limestone cliffs. In contrast, the population near the top of the limestone mountain range had more leaves , but the plants were of short stature and had the fewest inflorescences. The individuals distributed in limestone cliffs grew, produced, and dispersed seeds for an extended period following establishment. The growth of individuals was limited due to environmental factors in the habitat of distribution areas, including ridges, mountain tops in limestone regions, and sandy soil areas resulting from weathering. It was assessed to have a comparatively brief life cycle compared to that of the plants found on limestone cliffs. P. tongkangensis began flowering in early spring, and both fruit maturation and seed dispersal were completed before the onset of summer. The habitats were determined to receive around seven hours of sunlight per day during the summer, which was considered suitable for establishing a life cycle for the P. tongkangensis, a species requiring strong sunlight for growth to establish and success in a dry environment. Considering the status data gathered from this study, the P. tongkangensis was classified as an endangered species (EN). In addition, the collected data are expected to provide important information for the IUCN Red List of Threatened Species. Therefore, we proposed that the P. tongkangensis holds significant value as a core distribution site, given the observation of species with diverse characteristics on limestone cliffs in Pyeongchang-gun and Jeongseon-gun, Gangwon-do.

Studies on the Consumptine Use of Irrigated Water in Paddy Fields During the Growing of Rice Plants(III) (벼생유기간중의 논에서의 분석소비에 관한 연구(II))

  • 민병섭
    • Magazine of the Korean Society of Agricultural Engineers
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    • v.11 no.4
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    • pp.1775-1782
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    • 1969
  • The results of the study on the consumptine use of irrigated water in paddy fields during the growing season of rice plants are summarized as follows. 1. Transpiration and evaporation from water surface. 1) Amount of transpiration of rice plant increases gradually after transplantation and suddenly increases in the head swelling period and reaches the peak between the end of the head swelling poriod and early period of heading and flowering. (the sixth period for early maturing variety, the seventh period for medium or late maturing varieties), then it decreases gradually after that, for early, medium and late maturing varieties. 2) In the transpiration of rice plants there is hardly any difference among varieties up to the fifth period, but the early maturing variety is the most vigorous in the sixth period, and the late maturing variety is more vigorous than others continuously after the seventh period. 3) The amount of transpiration of the sixth period for early maturing variety of the seventh period for medium and late maturing variety in which transpiration is the most vigorous, is 15% or 16% of the total amount of transpiration through all periods. 4) Transpiration of rice plants must be determined by using transpiration intensity as the standard coefficient of computation of amount of transpiration, because it originates in the physiological action.(Table 7) 5) Transpiration ratio of rice plants is approximately 450 to 480 6) Equations which are able to compute amount of transpiration of each variety up th the heading-flowering peried, in which the amount of transpiration of rice plants is the maximum in this study are as follows: Early maturing variety ; Y=0.658+1.088X Medium maturing variety ; Y=0.780+1.050X Late maturing variety ; Y=0.646+1.091X Y=amount of transpiration ; X=number of period. 7) As we know from figure 1 and 2, correlation between the amount evaporation from water surface in paddy fields and amount of transpiration shows high negative. 8) It is possible to calculate the amount of evaporation from the water surface in the paddy field for varieties used in this study on the base of ratio of it to amount of evaporation by atmometer(Table 11) and Table 10. Also the amount of evaporation from the water surface in the paddy field is to be computed by the following equations until the period in which it is the minimum quantity the sixth period for early maturing variety and the seventh period for medium or late maturing varieties. Early maturing variety ; Y=4.67-0.58X Medium maturing variety ; Y=4.70-0.59X Late maturing variety ; Y=4.71-0.59X Y=amount of evaporation from water surface in the paddy field X=number of period. 9) Changes in the amount of evapo-transpiration of each growing period have the same tendency as transpiration, and the maximum quantity of early maturing variety is in the sixth period and medium or late maturing varieties are in the seventh period. 10) The amount of evapo-transpiration can be calculated on the base of the evapo-transpiration intensity (Table 14) and Tablet 12, for varieties used in this study. Also, it is possible to compute it according to the following equations with in the period of maximum quantity. Early maturing variety ; Y=5.36+0.503X Medium maturing variety ; Y=5.41+0.456X Late maturing variety ; Y=5.80+0.494X Y=amount of evapo-transpiration. X=number of period. 11) Ratios of the total amount of evapo-transpiration to the total amount of evaporation by atmometer through all growing periods, are 1.23 for early maturing variety, 1.25 for medium maturing variety, 1.27 for late maturing variety, respectively. 12) Only air temperature shows high correlation in relation between amount of evapo-transpiration and climatic conditions from the viewpoint of Korean climatic conditions through all growing periods of rice plants. 2. Amount of percolation 1) The amount of percolation for computation of planning water requirment ought to depend on water holding dates. 3. Available rainfall 1) The available rainfall and its coefficient of each period during the growing season of paddy fields are shown in Table 8. 2) The ratio (available coefficient) of available rainfall to the amount of rainfall during the growing season of paddy fields seems to be from 65% to 75% as the standard in Korea. 3) Available rainfall during the growing season of paddy fields in the common year is estimated to be about 550 millimeters. 4. Effects to be influenced upon percolation by transpiration of rice plants. 1) The stronger absorbtive action is, the more the amount of percolation decreases, because absorbtive action of rice plant roots influence upon percolation(Table 21, Table 22) 2) In case of planting of rice plants, there are several entirely different changes in the amount of percolation in the forenoon, at night and in the afternoon during the growing season, that is, is the morning and at night, the amount of percolation increases gradually after transplantation to the peak in the end of July or the early part of August (wast or soil temperature is the highest), and it decreases gradually after that, neverthless, in the afternoon, it decreases gradually after transplantation to be at the minimum in the middle of August, and it increases gradually after that. 3) In spite of the increasing amount of transpiration, the amount of daytime percolation decreases gadually after transplantation and appears to suddenly decrease about head swelling dates or heading-flowering period, but it begins to increase suddenly at the end of August again. 4) Changs of amount of percolation during all growing periods show some variable phenomena, that is, amount of percolation decreases after the end of July, and it increases in end August again, also it decreases after that once more. This phenomena may be influenced complexly from water or soil temperature(night time and forenoon) as absorbtive action of rice plant roots. 5) Correlation between the amount of daytime percolation and the amount of transpiration shows high negative, amount of night percolation is influenced by water or soil temperature, but there is little no influence by transpiration. It is estimated that the amount of a daily percolation is more influenced by of other causes than transpiration. 6) Correlation between the amount of night percoe, lation and water or soil temp tureshows high positive, but there is not any correlation between the amount of forenoon percolation or afternoon percolation and water of soil temperature. 7) There is high positive correlation which is r=+0.8382 between the amount of daily percolation of planting pot of rice plant and amount and amount of daily percolation of non-planting pot. 8) The total amount of percolation through all growin. periods of rice plants may be influenced more from specific permeability of soil, water of soil temperature, and otheres than transpiration of rice plants.

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