• 제목/요약/키워드: F1 generation

검색결과 557건 처리시간 0.032초

Studies of Molecular Breeding Technique Using Genome Information on Edible Mushrooms

  • Kong, Won-Sik;Woo, Sung-I;Jang, Kab-Yeul;Shin, Pyung-Gyun;Oh, Youn-Lee;Kim, Eun-sun;Oh, Min-Jee;Park, Young-Jin;Lee, Chang-Soo;Kim, Jong-Guk
    • 한국균학회소식:학술대회논문집
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    • 한국균학회 2015년도 춘계학술대회 및 임시총회
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    • pp.53-53
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    • 2015
  • Agrobacterium tumefaciens-mediated transformation(ATMT) of Flammulina velutipes was used to produce a diverse number of transformants to discover the functions of gene that is vital for its variation color, spore pattern and cellulolytic activity. Futhermore, the transformant pool will be used as a good genetic resource for studying gene functions. Agrobacterium-mediated transformation was conducted in order to generate intentional mutants of F. velutipes strain KACC42777. Then Agrobacterium tumefaciens AGL-1 harboring pBGgHg was transformed into F. velutipes. This method is use to determine the functional gene of F. velutipes. Inverse PCR was used to insert T-DNA into the tagged chromosomal DNA segments and conducting sequence analysis of the F. velutipes. But this experiment had trouble in diverse morphological mutants because of dikaryotic nature of mushroom. It needed to make monokaryotic fruiting varients which introduced genes of compatible mating types. In this study, next generation sequencing data was generated from 28 strains of Flammulina velutipes with different phenotypes using Illumina Hiseq platform. Filtered short reads were initially aligned to the reference genome (KACC42780) to construct a SNP matrix. And then we built a phylogenetic tree based on the validated SNPs. The inferred tree represented that white- and brown- fruitbody forming strains were generally separated although three brown strains, 4103, 4028, and 4195, were grouped with white ones. This topological relationship was consistently reappeared even when we used randomly selected SNPs. Group I containing 4062, 4148, and 4195 strains and group II containing 4188, 4190, and 4194 strains formed early-divergent lineages with robust nodal supports, suggesting that they are independent groups from the members in main clades. To elucidate the distinction between white-fruitbody forming strains isolated from Korea and Japan, phylogenetic analysis was performed using their SNP data with group I members as outgroup. However, no significant genetic variation was noticed in this study. A total of 28 strains of Flammulina velutipes were analyzed to identify the genomic regions responsible for producing white-fruiting body. NGS data was yielded by using Illumina Hiseq platform. Short reads were filtered by quality score and read length were mapped on the reference genome (KACC42780). Between the white- and brown fruitbody forming strains. There is a high possibility that SNPs can be detected among the white strains as homozygous because white phenotype is recessive in F. velutipes. Thus, we constructed SNP matrix within 8 white strains. SNPs discovered between mono3 and mono19, the parental monokaryotic strains of 4210 strain (white), were excluded from the candidate. If the genotypes of SNPs detected between white and brown strains were identical with those in mono3 and mono19 strains, they were included in candidate as a priority. As a result, if more than 5 candidates SNPs were localized in single gene, we regarded as they are possibly related to the white color. In F. velutipes genome, chr01, chr04, chr07,chr11 regions were identified to be associated with white fruitbody forming. White and Brown Fruitbody strains can be used as an identification marker for F. veluipes. We can develop some molecular markers to identify colored strains and discriminate national white varieties against Japanese ones.

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Effects of lactic acid bacteria fermented feed and three types of lactic acid bacteria (L. plantarum, L. acidophilus, B. animalis) on intestinal microbiota and T cell polarization (Th1, Th2, Th17, Treg) in the intestinal lymph nodes and spleens of rats

  • Da Yoon, Yu;Sang-Hyon, Oh;In Sung, Kim;Gwang Il, Kim;Jeong A, Kim;Yang Soo, Moon;Jae Cheol, Jang;Sang Suk, Lee;Jong Hyun, Jung;Hwa Chun, Park;Kwang Keun, Cho
    • Animal Bioscience
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    • 제36권1호
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    • pp.156-166
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    • 2023
  • Objective: In this study, we investigated the effects of Rubus coreanus-derived lactic acid bacteria (LAB) fermented feed (RC-LAB fermented feed) and three types of LAB (Lactobacillus plantarum, Lactobacillus acidophilus, Bifidobacterium animalis) on the expression of transcription factors and cytokines in Th1, Th2, Th17, and Treg cells in the intestinal lymph nodes and spleens of rats. In addition, the effect on intestinal microbiota composition and body weight was investigated. Methods: Five-week-old male rats were assigned to five treatments and eight replicates. The expression of transcription factors and cytokines of Th1, Th2, Th17, and Treg cells in the intestinal lymph nodes and spleens was analyzed using real-time reverse transcriptase polymerase chain reaction assays. Intestinal tract microbiota compositions were analyzed by next-generation sequencing and quantitative polymerase chain reaction assays. Results: RC-LAB fermented feed and three types of LAB increased the expression of transcription factors and cytokines in Th1, Treg cells and Galectin-9, but decreased in Th2 and Th17 cells. In addition, the intestinal microbiota composition changed, the body weight and Firmicutes to Bacteroidetes (F/B) ratio decreased, and the relative abundance of LAB increased. Conclusion: LAB fermented feed and three types of LAB showed an immune modulation effect by inducing T cell polarization and increased LAB in the intestinal microbiota.

포항 분지 제3기층 시추코아 유기물의 석유 지화학적 특성 (Petroleum Geochemistry of Organic Matter from the core samples in the Tertiary Pohang Basin)

  • 이영주;곽영훈;윤혜수;정태진;오재호;김학주;강무희
    • 한국석유지질학회지
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    • 제5권1_2호
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    • pp.48-58
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    • 1997
  • 포항 분지 신제3기 연일층군 퇴적물내 유기물의 석유 지화학적 특성연구를 위하여 시추공 B, E, F, H에서 이암 시추 시료를 채취하여 유기탄소 분석, Rock-Eval 열분석을 실시하였다. 또한 각 시추공의 선별된 시료에 대해서 케로젠을 분리하고 비투멘을 추출하여 광학 현미경 관찰, 적외선 분광 분석, 생물표기화합물 분석을 실시하였다 시추공 시료의 유기탄소 함량은 $0.55{\~}3.74{\%}$로 석유 근원암의 조건을 갖추었고 석유 생성 잠재력을 나타내는 S1+S2 값은 H공을 제외한 거의 모든 시료에서 각각 2mgHC/gRock 이상을 나타내어 시추공 시료의 유기물 함량 및 유기물의 석유 생성 잠재력은 대체로 양호한 것으로 나타났다. Rock-Eval 열분석, 적외선 분광 분석 및 케로젠의 현미경 관찰을 통해서 살펴본 B, E, F 시추시료의 유기물은 타이프 II에 비교되었고 H공의 시료는 육성 기원 유기물이 우세해서 타이프 III에 비교되었다 H공 시료의 유기물이 다른 시추공 시료의 그것에 비해 석유 생성 잠재력이 상대적으로 낮은데 이는 분지의 가장자리에 위치하여 육성 유기물의 함량이 상대적으로 많은데 기인하는 것으로 해석된다. 연일층군 유기물의 열 성숙도는 미성숙 단계이고 시추 심도에 따른 뚜렷한 열적 진화 양상을 나타내지 않았다. 석유 지화학적 분석 자료를 종합하면 포항 분지 연일층군은 유기탄소의 함량 및 석유 생성 잠재력은 양호하지만 열적으로 미성숙 상태라서 아직 석유 생성 단계에 이르지 못하였는데 이는 주로 퇴적층의 매몰 심도가 얕은 것에 기인하는 것으로 판단된다. 케로젠의 현미경 관찰 결과와 생물표기화합물 분석에 의하면 연일층군 유기물은 주로 해양기원 유기물로 구성되어 있으나 육상 기원 유기물도 상당히 포함되어 있었으며, 프리스테인/파이테인의 비율을 고려 할 때 환원 환경하에서 퇴적된 것으로 보인다. 이런 퇴적 환경 및 유기물 특징을 고려했을 때 포항 분지는 육지에서 가까운 바다로 주변 육상 기원 유기물의 유입이 용이했던 것으로 여겨진다. 시추공 분석 시료의 최하부 구간에는 육상 기원 유기물이 우세한데 이는 포항 분지 초기의 육성 퇴적 환경의 영향에 의한 것으로 해석된다.

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한국도시가족의 가족생활주기 모형 설정에 관한 연구 (A Study on the modeling of Family Life Cycle in Korean Urban Family)

  • 유영주
    • 가정과삶의질연구
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    • 제2권1호
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    • pp.111-129
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    • 1984
  • The purpose of this study is to make a model of Family Life Cycle in Korea now. Answers to a questionnaire were collected from 724 housewives in Seoul area, 232 housewives in big cities, 203 housewives in small cities. The questionnaire contained 10 items about family situations,. Analyzing method employed for modeling to family life cycle are frequency, percentage, X2 -test . Results and findings are as follows; 1) The mean of first marriage age is 22.4yrs old. 23.5yrs old is the result of statistical materials published by E.P.B. 1975. The age of first marriage is higher according to the age, education & residential area. 2) The mean of first baby bearing age is 24.2 yrs old (generally 1 year after marriage). This age is the same as the result of statistical materials published by E.P.B. 3) the mean of last baby berating age is 32.6 yrs old compared to the E.P.B. statistical materials 3 yrs. low. This age is very different according to the age, education & residential area. 4) The mean of first child marriage age is 46.4 yrs old compared to the E.P.B. statistical materials 2.5 yrs old low. 5) the mean of last marriage age is 52.7 yrs old. this age is also 2.3 yrs low compared to the result of E.P.B. materials. 6) The number of child & interval is quite different according to the result of family planning generation of not. 7)According to the wife's employment, it does not show and difference. 8)The result of analyzing by F.L.C.,, we don't have launching stage & middle age stage apparently. So, we can make model of F.L.C. in Korea as follows (it will be change). 1) Establishment stage; from marriage to first baby born (23yrs old -24yrs old). 2) Child bearing & rearing stage; form first baby born to first child enter primary school(24 yrs old-30 yrs old). 3) Families with children's education stage; from first child primary school to high school graduation (30 yrs old-42yrs old) 4)Families with adult children stage; form first child got army college or stay at home(42 yrs- 48 yrs old). 5)Families with children's marriage stage; from first child marriage to last child marriage (48yrs old-57yrs old). 6) Aging stage; from last child marriage to self dying.

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배추 작물에 이원적 전사유도 시스템 도입을 위한 조기 검증방법 확립 (Establishment of Early Verification Method for Introduction of the Binary Trans-activation System in Chinese Cabbage (Brassica rapa L. ssp. Pekinensis))

  • 김수윤;유희주;김정호;조명철;박미희
    • 원예과학기술지
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    • 제31권1호
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    • pp.95-102
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    • 2013
  • 이원적 전사유도 시스템(binary trans-activation system)은 도입유전자의 발현을 조절하는 기작(mechanism) 중에 하나로, 목적 유전자의 발현이 전사활성 인자를 가지고 있는 식물체와의 교배를 통해서만 발현되는 시스템이다. 본 연구에서는 이원적 전사유도 시스템을 원예 작물의 우수한 유전자원 및 신품종 보호 방법으로 이용하고자, 배추에서 이 시스템의 기능을 검정하였다. 배추작물에서 이원적 전사유도 시스템의 이용가능성을 검정하기 위하여 activator construct(35SLhGBart)와 reporter construct(pOpGUS1300)를 작성하였고 공동형질전환방법으로 배추에 형질전환하였다. 두 종류의 카세트가 도입된 형질전환체는 항생제를 이용하여 선발하였으며, 재분화된 신초의 GUS 유전자 발현으로 이 시스템의 활성을 확인하였다. 또한 이 시스템을 조직 특이적으로 유도하기 위하여 애기장대의 자성 배우체 특이적 프로모터를 이용하여 activator construct(795LhGBart)를 작성하여 애기장대에 형질전환 하였다. 공동형질전환된 애기장대는 자성 배우체에서 조직 특이적인 발현을 나타냈다. 이러한 결과는 이원적 전사유도 시스템이 목적유전자의 발현을 배추의 $F_1$ 종자에서 선택적으로 유도하는 방법으로써 우수한 유전자원 및 신품종 보호에 이용될 수 있다는 것을 보여주는 것이라고 생각된다.

SWT-SVD 전처리 알고리즘을 적용한 예측적 베어링 이상탐지 모델 (A Predictive Bearing Anomaly Detection Model Using the SWT-SVD Preprocessing Algorithm)

  • 박소향;김광훈
    • 인터넷정보학회논문지
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    • 제25권1호
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    • pp.109-121
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    • 2024
  • 섬유, 자동차와 같은 여러 제조 공정에서 설비가 고장이 나 멈추게 되면 기계가 작동하지 않게 되고 이는 기업의 시간적, 금전적 손실로 이어진다. 따라서 설비의 고장이 발생하기 전, 고장을 예측하여 정비할 수 있도록 설비의 이상을 사전에 탐지하는 것이 중요하다. 대부분의 설비 고장 원인은 설비의 필수 부품인 베어링의 고장으로, 베어링의 고장을 진단하는 것은 설비예지보전 연구의 핵심이기도 하다. 본 논문에서는 베어링의 진동 신호를 분석하여 SWT-SVD 전처리 알고리즘을 제안하고 이를 시계열 이상탐지 모델 네트워크 중 하나인 어노멀리 트랜스포머에 적용하여 베어링 이상탐지 모델을 구현한다. 제조공정의 베어링 진동신호는 실시간으로 센서값들의 이력이 작성되어 노이즈가 존재하므로, 이를 줄이기 위해 본 연구에서는 정상 웨이블릿 변환(Stationary Wavelet Transform)을 사용하여 주파수 성분을 추출하고, 특이값 분해(Singular Value Decomposition) 알고리즘을 통해 유의미한 특징들을 추출하는 전처리를 진행한다. 제안하는 SWT-SVD 전처리 방법을 적용한 베어링 이상탐지 모델 실험을 위해 IEEE PHM학회에서 제공하는 PHM-2012-Challenge 데이터 세트를 활용하였으며, 실험 결과는 0.98의 정확도와 0.97의 F1-Score로 우수한 성능을 보였다. 추가로, 성능 향상을 입증하기 위해 선행 연구들과 성능 비교를 진행한다. 비교 실험을 통해 제안한 전처리 방법이 기존의 전처리보다 높은 성능을 보임을 확인하였다.

Kinetic Study of the Anaerobic Digestion of Swine Manure at Mesophilic Temperature: A Lab Scale Batch Operation

  • Kafle, Gopi Krishna;Kim, Sang-Hun
    • Journal of Biosystems Engineering
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    • 제37권4호
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    • pp.233-244
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    • 2012
  • Purpose: The kinetic evaluation was performed for swine manure (SM) degradation and biogas generation. Methods: The SM was anaerobically digested using batch digesters at feed to inoculum ratio (F/I) of 1.0 under mesophilic conditions ($36.5^{\circ}C$). The specific gas yield was expressed in terms of gram total chemical oxygen demand (mL/g TCOD added) and gram volatile solids added (mL/g VS added) and their effectiveness was discussed. The biogas and methane production were predicted using first order kinetic model and the modified Gompertz model. The critical hydraulic retention time for biomass washout was determined using Chen and Hashimoto model. Results: The biogas and methane yield from SM was 346 and 274 mL/ TCOD added, respectively after 100 days of digestion. The average methane content in the biogas produced from SM was 79% and $H_2S$ concentration was in the range of 3000-4108 ppm. It took around 32-47 days for 80-90% of biogas recovery and the TCOD removal from SM was calculated to be 85%. When the specific biogas and methane yield from SM (with very high TVFA concentration) was expressed in terms of oven dried volatile solids (VS) basis, the gas yield was found to be over estimated. The difference in the measured and predicted gas yield was in the range of 1.2-1.5% when using first order kinetic model and 0.1% when using modified Gompertz model. The effective time for biogas production ($T_{Ef}$) from SM was calculated to be in the range of 30-45 days and the critical hydraulic retention time ($HRT_{Critical}$) for biomass wash out was found to be 9.5 days. Conclusions: The modified Gompertz model could be better in predicting biogas and methane production from SM. The HRT greater than 10 days is recommended for continuous digesters using SM as feedstock.

Influence of Deposition Method on Refractive Index of SiO2 and TiO2 Thin Films for Anti-reflective Multilayers

  • Song, Myung-Keun;Yang, Woo-Seok;Kwon, Soon-Woo;Song, Yo-Seung;Cho, Nam-Ihn;Lee, Deuk-Yong
    • 한국세라믹학회지
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    • 제45권9호
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    • pp.524-530
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    • 2008
  • Anti-Reflective (AR) thin film coatings of $SiO_2$ (n= 1.48) and $TiO_2$ (n=2.17) were deposited by ion-beam assisted deposition (IBAD) with End-Hall ion source and conventional electron beam (e-beam) evaporation to investigate the effect of deposition method on the refractive indicies (n) of the fIlms. Green-light generation using a GaAs laser diode was achieved via excitation of the second harmonic. The latter resulted from the transmission of the fundamental guided-mode wave of 1064 nm through periodically poled $LiNbO_3$. Large differences in the refractive indicies of each of the layers in the multilayer coating may improve AR performance. IBAD of $SiO_2$ reduced its refractive index from 1.45 to 1.34 at 1064 nm. Conversely, e-beam evaporation of $TiO_2$ increased its refractive index from 1.80 to 2.11. In addition, no fluctuations in absorption at the wavelength of 1064 nm were found. The results suggest that films prepared by different deposition methods can increase the effectiveness of multilayer AR coatings.

에너지저장장치를 이용한 제주지역 풍력발전 한계용량 증대효과 분석 (Increasing Effect Analysis of the Wind Power Limit Using Energy Storage System in Jeju-Korea)

  • 김영환;김세호
    • 한국태양에너지학회 논문집
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    • 제34권1호
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    • pp.81-90
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    • 2014
  • The Jeju-Korea power system is a small-sized network with a system demand ranging from a autumn minimum of 350MW to a summer peak of 716MW. Because Jeju island is well exposed to north-east winds with high speed, applications to connect to Jeju power system are flooded. Considering physical/environmental constraints, Jeju Self-governing Province has also target for the wind power capacity of 1,350MW by 2020. It amounts to two or three times of Jeju average-demand power and wind power limit capacity announced by Korea Power Exchange (KPX) company. Wind farm connection agreements will be signed to maximize utilization of wind resource. In spite of submarine cable HVDC connected to Korea mainland, Jeju power system is independently operated by frequency and reserve control. This study reevaluates wind power limit based on the KPX criteria from 2016 to 2020. First of all wind power generation limit are affected by off-peak demand in Jeju power system. Also the possibility capacity rate of charging wind power output is evaluated by using energy storage system (ESS). As a result, in case of using 110MWh ESS, wind power limit increases 33~55MW(30~50% of ESS), wind power constraint energy decreases from 68,539MWh to 50,301MWh and wind farm capacity factor increases from 25.9 to 26.1% in 2020.

태음조위탕(太陰調胃湯)의 항산화(抗酸化) 효능(效能)에 의한 간세포(肝細胞) 보호(保護) 효과(效果)에 관한 연구(硏究) (Effects of Taeumjowetang on Lipid Peroxidation by Free Radicals and Oxidative Damage of Hepatocytes by tert-Butyl Hydroperoxide)

  • 김만우;박성식
    • 사상체질의학회지
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    • 제13권1호
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    • pp.51-60
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    • 2001
  • Effects of Taeumjowetang on Lipid Peroxidation by Free Radicals and Oxidative Damage of Hepatocytes by tert-Butyl Hydroperoxide. 1. Purpose The present study was carried out to evaluate the antioxidant effects of Taeumjowetang in vitro. 2. Methods In this study, antioxidant effects of TJT on lipid peroxidation were determined according to the method of TBA. (Abbreviation) TJT : Taeumjowetang, TBA : 2-thiobarbituric acid. 3. Results : 1) TJT inhibited markedly peroxidation of linoleic acid during the autoxidation. 2) TJT inhibited lipid peroxidation induced by hydroxyl radical derived from H2O2-Fe2+ in rat liver homogenate. 3) TJT showed 66% scavenging effect on DPPH radical. 4) TJT exhibited a 25% inhibitory effect on superoxide generation from xanthine-xan thine oxidase system. 5) To investigate the antioxidative effects of TJT on the hepatocytes, cultured normal rat liver cells(Ac2F) were prepared and incubated with or without TJT. After 16~18hr, cells placed in DMEM medium without serum, and then incubated with 1mM t-BHP for 2hr. Viable cells were detected by MTT assay. In this test, TJT protected the cell death induced by t-BHP and significantly increased cell viability in the normal rat liver cell. (Abbreviation) DPPH : ${\alpha},{\alpha}$-diphenyl-${\beta}$-picryl hydrazyl, DMEM : Dulbecco's Modified Eagle Medium, t-BHP : terr-butyl hydroperoxide, 4. Conclusion These results suggested that TJT might play a protective role in lipid peroxidation by free radicals.

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