• Title/Summary/Keyword: Eisenia Andrei

Search Result 40, Processing Time 0.044 seconds

Cloning and Characterization of endo-β-1,4-glucanase genes from the Midgut of the Earthworm, Eisenia andrei (지렁이 중장에서 발현되는 endo-β-1,4-glucanase 유전자들의 클로닝과 특성에 관한 연구)

  • Lee, Myung-Sik;Park, Sang-Kil;Tak, Eun-Sik;Ahn, Chi-Hyun;Kim, Hye-Ryung;Park, Soon-Cheol
    • Journal of the Korea Organic Resources Recycling Association
    • /
    • v.15 no.3
    • /
    • pp.80-89
    • /
    • 2007
  • Two endogenous endo-${\beta}$-1,4-D-glucanase (EGase, EC 3.2.1.4) cDNAs were cloned from the midgut of the earthworm Eisenia anderi, and named EaEG2 and EaEG3, respectively. A sequence of 1,368 bp was determined and the coding region is composed of 456 amino acid residues including the initiation methionine. The N-terminal region of 20 residues in the deduced sequence was regarded as the signal peptide. These EGases belong to glycosyl hydrolase family 9 (GHF9) and showed high levels of identity(51-55%) with selected termite, cockroache, crayfish and mollusc EGases. The EGases of earthworm consist of three consensus catalytic domains found in most microbial cellulases. A phylogenetic tree was constructed using the deduced amino acid sequence data matched through the BLASTX program and showed that GHF9 families could be divided into five groups of arthropoda, bacteria, plant, annelida and mollusc.

  • PDF

Behavior Changes of Earthworm from Soils Amended with Biochar - Avoidance and Productivity - (바이오차르 토양 투입에 따른 지렁이의 행동변화 연구 - 회피 및 생산성 변화 -)

  • Kim, You Jin;Yang, Seung Hoon;Kim, Seo Yeon;Yoon, Hong Seok;Yoo, Ga Young
    • Journal of Climate Change Research
    • /
    • v.5 no.4
    • /
    • pp.277-284
    • /
    • 2014
  • Biochar application to soil is widely known to have effects of climate change mitigation and soil quality improvement. However, effects of biochar on soil ecosystem are not always positive and some biochars are reported to contain toxic materials which might influence soil ecosystem. In this context, this study aims to investigate behavioral changes of earthworms(Eisenia fetida, Eisenia andrei) in response to different application rates of biochar to artificial soil. Treatment included two types of biochars made from rice husk (RH_Char) and wastewater sludge (SL_Char) with 1% and 10% application rates, respectively. Avoidance test revealed that earthworms did not avoid SL_Char treatments at 1% and 10%, while they rather moved to the RH_Char treatments probably due to higher labile carbon content(Hot water extractable carbon) of the RH_Char. The HWC content of RH_Char was 4 times higher than that of the SL_Char. Results of reproduction test showed that the survival rates, number of juveniles and number of cocoons were not influenced by biochar application except for the treatment of SL_Char at 10% rate. In the SL_Char 10% treatment, fatality was approximately 3.3 times as high as the control and the number of cocoons was 1.3 times higher in the same treatment than the control, indicating that earthworms were under environmental stress. The possible explanation for the stress condition was related to higher Cd, Ni, Cr, and As contents in the SL_Char. Overall results imply that biochar application at low rate might not change earthworms' behavior for the short term, while the reproduction behavior might be negatively influenced under the high application rate.

Molecular Cloning and Sequence Analysis of Coelomic Cytolytic Factor-like Gene from the Midgut of the Earthworm, Eisenia Andrei (줄지렁이 중장에서 분리한 Coelomic cytolytic factor-유사 유전자의 클로닝 및 염기서열 분석에 관한 연구)

  • Baek, Nam Sook;Lee, Myung-Sik;Park, Sang-Kil;Kim, Dae-hwan;Tak, Eun-Sik;Ahn, Chi-Hyun;Sun, Zhenjun;Park, Soon Cheol
    • Journal of the Korea Organic Resources Recycling Association
    • /
    • v.16 no.4
    • /
    • pp.64-73
    • /
    • 2008
  • The cDNA of CCF (coelomic cytolytic factor)-like gene (EC 3.2.1.16), a kind of glycosyl hydorlase, was isolated and cloned from the midgut of the earthworm Eisenia anderi. The size of nucleotide sequence appeared to be 1,152 bp and its predicted coding region was composed of 384 amino acid residues including the initiation methionine. The 17 residues at N-terminal end in the deduced amino acid sequence were regarded to be a signal peptide. Based on the amino acid sequence analysis, it appeared that this CCF-like protein could belong to glycosyl hydrolase family 16 (GHF16) and showed a high sequence homology of about 79~99% with CCF and CCF-like proteins from other earthworm species. The CCFs and CCF-like proteins from various earthworm species exhibited a 100% homology in the polysacchride-binding motif and glucanase motif. It has been reported that the CCFs isolated from E. fedita appeared to show a broader pattern recognition specificity than those from other earthworm species because this species resides in decaying organic matter showing very high microbial activity, implying that CCF-like protein isolated in this study from E. andrei might exhibit a broad substrate specificity that is a useful characteristic for industrial application. A phylogenetic analysis using the deduced amino acid sequences of CCF-related proteins through the BLASTX revealed that GHF16 families could be divided into three groups of metazoa, viriplantae and eubacteria subfamily. Subsequently the CCF-related proteins of metazoa subfamily could clearly be subgroup into lophotrochozoan and edysozoan type including a deuterostome origin. Further understanding of the biological properties of E. andrei CCF-like protein should be addressed to regulate the ${\beta}$-D-glucan hydrolysis and production for the industrial uses.

  • PDF

Analysis of Reproduction and CO I Gene Sequence between Two Earthworm Populations Used in Vermicomposting Organic Wastes in Different Localities (서로 다른 지역에서 유기성 폐기물 처리에 이용되는 두 지렁이 집단의 생식 및 CO I 유전자 분석)

  • Bae, Yoon-Hwan
    • Journal of the Korea Organic Resources Recycling Association
    • /
    • v.26 no.3
    • /
    • pp.39-46
    • /
    • 2018
  • Two domestic earthworm populations used in vermicomposting in different lacalities were collected. The one was from Hongcheon (Kangwon province) and the other was from Youngdong (Chungcheong province). Reproductive capacities and the degree of reproductive isolation of two population were investigated. CO I gene sequences were also compared. There was no difference in their reproductive capacities. And there was no reproductive isolation between two populations. Two populations were identified as Eisenia andrei or Eisenia fetida by CO I gene biomarkers. Phylogenetic tree formulated by CO I gene sequence strongly suggested that two populations were just the same species.

Transcriptome Analysis in the Midgut of the Earthworm (Eisenia andrei) using Expressed Sequence Tags

  • Lee, Myung-Sik;Cho, Sung-Jin;Lee, Jong-Ae;Moon, Joo-Sik;Cho, Hyun-Ju;Park, Bum-Joon;Kim, Seong-Ki;Choo, Jong-Kil;Park, Soon-Cheol
    • Proceedings of the Korean Society of Sericultural Science Conference
    • /
    • 2003.10a
    • /
    • pp.144-144
    • /
    • 2003
  • In order to understand the expression profile of earthworm midgut, we analyzed 1255 expressed sequence tags (ESTs) derived from earthworm midgut cDNA library. Among 1255 ESTs analyzed, 537 (42.8%) ESTs represented 231 unique genes of which 168 ESTs were singletons and 63 ESTs represented by two or more ESTs. A total of 571 unknown ESTs showed no significant homology. The remaining 147 (11.7%) ESTs whose lengths were less than 150 bp were removed. Among 231 identified unique genes, 168 genes (72.7%) were sequenced only once. (omitted)

  • PDF

Developmental Changes of Blastema during Earthworm Tail Regeneration (지렁이 꼬리재생시 재생아의 형태발생에 관한 연구)

  • 조성진;이명식;허소영;신명주;박순철
    • The Korean Journal of Soil Zoology
    • /
    • v.6 no.1_2
    • /
    • pp.1-6
    • /
    • 2001
  • Although the earthworm is an important animal species capable of regenerating missing body part, earthworm regeneration is not well understood at the tissue, cell and molecular levels. In order to understand the developmental changes of blastema during earthworm tail regeneration, the formation and development blastema during regeneration was investigated by histological analysis. Within 1 day after amputation, dediffentiating blastemal cells appeared in coelomic side of longitudinal muscle layer. At 3 days postamputation, proliferating blastemal cells migrated into coelum and blastema was formed beneath wound epithelium around 7 days after amputation. Segmentation of blastema was observed around 2 weeks after amputation followed by redifferentiation of nephridium, intestine, setae and septa.

  • PDF