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An Installation and Model Assessment of the UM, U.K. Earth System Model, in a Linux Cluster (U.K. 지구시스템모델 UM의 리눅스 클러스터 설치와 성능 평가)

  • Daeok Youn;Hyunggyu Song;Sungsu Park
    • Journal of the Korean earth science society
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    • v.43 no.6
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    • pp.691-711
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    • 2022
  • The state-of-the-art Earth system model as a virtual Earth is required for studies of current and future climate change or climate crises. This complex numerical model can account for almost all human activities and natural phenomena affecting the atmosphere of Earth. The Unified Model (UM) from the United Kingdom Meteorological Office (UK Met Office) is among the best Earth system models as a scientific tool for studying the atmosphere. However, owing to the expansive numerical integration cost and substantial output size required to maintain the UM, individual research groups have had to rely only on supercomputers. The limitations of computer resources, especially the computer environment being blocked from outside network connections, reduce the efficiency and effectiveness of conducting research using the model, as well as improving the component codes. Therefore, this study has presented detailed guidance for installing a new version of the UM on high-performance parallel computers (Linux clusters) owned by individual researchers, which would help researchers to easily work with the UM. The numerical integration performance of the UM on Linux clusters was also evaluated for two different model resolutions, namely N96L85 (1.875° ×1.25° with 85 vertical levels up to 85 km) and N48L70 (3.75° ×2.5° with 70 vertical levels up to 80 km). The one-month integration times using 256 cores for the AMIP and CMIP simulations of N96L85 resolution were 169 and 205 min, respectively. The one-month integration time for an N48L70 AMIP run using 252 cores was 33 min. Simulated results on 2-m surface temperature and precipitation intensity were compared with ERA5 re-analysis data. The spatial distributions of the simulated results were qualitatively compared to those of ERA5 in terms of spatial distribution, despite the quantitative differences caused by different resolutions and atmosphere-ocean coupling. In conclusion, this study has confirmed that UM can be successfully installed and used in high-performance Linux clusters.

Root Development end Branching farms of Norway Spruce(Picea abies) in the Differently Acidified Forest Soil (토양(土壤) 산성화(酸性化) 정도(程度)에 따른 독일가문비나무(Picea abies)의 뿌리 발달(發達)과 분지형태(分枝形態)에 관(關)한 연구(硏究))

  • Lee, Do-Hyung
    • Journal of Korean Society of Forest Science
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    • v.90 no.4
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    • pp.458-464
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    • 2001
  • In this study, the annual growth of roots and their branching forms of Norway spruce(Picea abies [L.] Karst.) were analysed to compare the development of their root in the differently acidified forest soils. And there was no significant difference among the stands for the modified roots and the non-modified roots depending on the root branch forms, and however in the most acidified Weidenbrunnen stand, the modified roots, the abnormal root branch form such as fork, gun and rake types were appeared. As a result of the ring of the root, the annual horizontal root growth were 6.3cm for Weidenbrunnen and Barbis stands and 9.5cm for Eberg$\ddot{o}$tzen stand. The average annual vertical root growth was 4.4cm, 5.4cm, and 6.7cm for Weidenbrunnen stand, Barbis stand, and Eberg$\ddot{o}$tzen stand, respectively. The cross section area by root distribution at 80cm deep showed that the thick and thin roots were evenly distributed in of Eberg$\ddot{o}$tzen stand and the sum of root cross section area was $32.6cm^2$. In Barbis stand, the thick roots were distributed in the center while the thin roots were comparatively rare. And the sum of root cross section area was $29.2cm^2$. In Weidenbrunnen stand, only a few thin roots were found, and the total root cross section area was $10.9cm^2$. The stability coefficient of roots were in the order of Eberg$\ddot{o}$tzen stand(1.04), Barbis stand (0.3), and Weidenbrunnen(0.08) stand. Among the investigated Norway spruce stands, the modified abnormal root branching form and the low root growth appeared in the Weidenbrunnen stand could be attributed by the soil acidification etc.

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Estimation of Carbon Storage for Pinus rigida Stands in Muju (무주지역 리기다소나무 임분에 대한 탄소저장량 평가)

  • Seo, Yeon Ok;Jung, Sung Cheol;Lee, Young Jin
    • Korean Journal of Environment and Ecology
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    • v.30 no.3
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    • pp.399-405
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    • 2016
  • This study aimed to determine the total amount of carbon stored in the aboveground, belowground tree biomass, dead trees, and organic matter in the forest floor and soil of the 36-year-old Pinus rigida stands in Muju. A total of three plots were selected to measure the carbon stored in live trees, dead trees, forest floor, and soil. Results showed that the carbon stocks of P. rigida stands amounted to 51.0 ton C/ha in aboveground biomass and 29.6 ton C/ha in belowground biomass. The distribution ratios of carbon stocks were as follows: 41.0% in stem wood, 36.8% in roots, 12.8% in branches, 6.0% in stem bark and 3.4% in foliage. The carbon stocks in dead tree amounted to 0.65 ton C/ha while it was 6.40 ton C/ha in organic matter in forest floor. The total amount of carbon stocks found in soil was 51.62 ton C/ha: 20.27 ton C/ha at 0~10 cm depth, 12.83 ton C/ha at 10~20 cm depth, 12.27 ton C/ha at 20~30 cm depth, and 6.24 ton C/ha at 30~50 cm depth. It was also observed that, as the soil depth increased, the soil carbon stocks tended to decrease. Results showed that the total amount of carbon stocks of P. rigida stands in Muju was 139.27 ton C/ha; the highest portion of the cumulative carbon stocks was found to be in soil at 37.1%, followed by the aboveground biomass with 36.6%, belowground biomass with 21.3%, forest floor with 4.6 % and dead trees with 0.5 %. This study is expected to provide forest managers accurate estimates of carbon stored in the habitat of P. rigida stands in Muju.

Phenology and Population Dynamics of Scirpus fluviatilis (Torr.) A. Gray in the Littoral Zone of the Upo Wetland (우포늪 연안대에서 매자기의 화력학과 개체군 변화)

  • Seo, Hye-Ran;Park, Sang-Yong;Oh, Kyung-Hwan
    • Journal of Wetlands Research
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    • v.11 no.3
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    • pp.49-59
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    • 2009
  • Seasonal changes of the growth characteristics and biomass of Scirpus fluviatilis, a aquatic emergent vascular plant, were investigated to reveal the phenology and the population dynamics and to provide the fundamental resources for the restoration counterplan of the wetland vegetation in the littoral zone of the Upo wetland, Changnyeong-gun, Gyeongsangnam-do, Korea from March 2006 to November 2006. Scirpus fluviatilis was distributed commonly in Upo, Mokpo, Sajipo, Jokjibyeol, and Topyeongcheon upstream and downstream of Upo wetland, and the density was highest in Mokpo. Distribution range for the water depth was 9~49cm, and the highest shoot density in 26~49cm, and the mean shoot density was $119/m^2$, and the mean shoot length was 122.3cm on May 28. The number of the tuber was $104.5/0.25m^2$, and the living tubers were 84.2%. The mean fresh biomass of the living tubers was 3.0g, and those of 1~4g was most as 57.9%. Germination rates of the living tubers was 43.8%, and the maximum rate was in 7~9g and more than 10g. In the pot cultivation, the shoot density of the germinated tubers and the dormant tubers were highest as 13.5 and 9.7, respectively in early August. In the field study, the shoot density had few change before typhoon damage, while the density increased abruptly in November after flooding accompanied with the typhoon 'Ewiniar'. The shoot length in the pot cultivation and in the field study were 100~116cm and 60~170cm, respectively in the growth-end. Biomass allocation rates into the stem, leaf, flower, and underground parts were 8.9%, 6.6%, 0%, and 84.5%, respectively in the pot cultivation of the germinated tubers, and those of the dormant tubers were 7.1%, 7.1%, 0%, and 85.8%, respectively. The tuber number increased to 1.4~4.1 times by the growth-end, so it is concluded that Scirpus fluviatilis is mostly propagated by the vegetative reproduction.

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A Review on Ocean Acidification and Factors Affecting It in Korean Waters (우리나라 주변 바다의 산성화 현황과 영향 요인 분석)

  • Kim, Tae-Wook;Kim, Dongseon;Park, Geun-Ha;Ko, Young Ho;Mo, Ahra
    • Journal of the Korean earth science society
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    • v.43 no.1
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    • pp.91-109
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    • 2022
  • The ocean is a significant sink for atmospheric anthropogenic CO2, absorbing one-third of the total CO2 emitted by human activities. In return, oceans have experienced significant declines in seawater pH and the aragonite saturation state also called ocean acidification. This study evaluates the distribution of aragonite saturation state, an indicator to assess the potential threat from ocean acidification, by combining newly obtained data from the west coast of South Korea with previous datasets covering the Yellow Sea, East Sea, northern South China Sea, and southeast coast of South Korea. In general, offshore waters absorb atmospheric CO2; however, most of the collected water samples show aragonite oversaturation. On the southeast coast, the aragonite saturation state was significantly affected by river discharge and associated variables, such as freshwater input with nutrients, seasonal stratification, biological carbon fixation, and bacterial remineralization. In summer, hypoxia and mixing with relatively acidic freshwater made the Jinhae and Gwangyang Bays undersaturated with respect to aragonite, possibly threatening marine organisms with CaCO3 shells. However, widespread aragonite undersaturation was not observed on the west coast, which receives considerable river water discharge. In addition, occasional upwelling events may have worsened the ocean acidification in the southwestern part of the East Sea. These results highlight the importance of investigating site-specific ocean acidification processes in coastal waters. Along with the above-mentioned seasonal factors, the dissolution of atmospheric CO2 and the deposition of atmospheric acidic substances will continue to reduce the aragonite saturation state in Korean waters. To protect marine ecosystems and resources, an ocean acidification monitoring program should be established for Korean waters.

A Study on Organizational Strategy and Operational Elements of Community-based Agricultural Management Bodies (마을단위 농업경영체 조직전략 및 운영요소 도출 연구)

  • Kim, Jong An;Kil, Cheong Soon;Kim, Gi Tae;Kim, Won Gyeong
    • Journal of Agricultural Extension & Community Development
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    • v.20 no.3
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    • pp.777-822
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    • 2013
  • This study attempts to elicit the organizational strategy and operational elements of community-based agricultural management bodies as new main farm management. We analyzed the newest discussion trend, cooperated community management, between Republic of Korea and Japan based on theory of organizing regional agriculture, and also researched on the organization management and business management about cooperated management of community. In this study, the main conclusion of the organizational strategy and operational elements of community-based agricultural management bodies are as following. i) The community-based agricultural management bodies is the cooperation managed individual agriculture resources as joint stock for purposing compound goal, an expansion agricultural income, maintenance farm productivity and rural societies. ii) The domain of cooperative management focus on secondary and tertiary industry like food process, farm produce distribution, rural experience more than farm produce production. The study suggest business promotion system of village unit farmers groups, element of organization management as executive decision organization, business management, operating factor for each steps and management element of cooperation farm working. iii) The policy direction for invigoration community-based agricultural management bodies is to make facilitation for each steps instead of standardized support.

A Study on the Bird Communities and Similarity of Three Streams in Daejeon Metropolitan City (대전 3대 하천의 조류군집과 유사성에 관한 연구)

  • Kim, In-Kyu;Lee, Han-Soo;Paek, Woon-Kee;Lee, Joon-Woo
    • Korean Journal of Environment and Ecology
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    • v.24 no.2
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    • pp.147-156
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    • 2010
  • This study was conducted from April, 2002 to March 2006, using three urban streams(Gap Stream, Yudeung Stream and Daejeon Stream) in Daejeon Metropolitan City. 12,027 individual birds summed by the peak count in 126 species, 34 families, and 13 orders were observed from three stream sites. Dominant species were of Anas poecilorhyncha, Anas crecca, Columba livia, Passer montanus, and Egretta garzetta(in that order). The groups of birds were classified into six types. The most frequent group were the arbor birds(54 species), while the smallest group was the diving ducks(7 species). As for the number of individuals, the shrub bird group had 721 individuals while the dabbling ducks observed had 4,974 individuals. Regarding the distribution of birds appeareing in each stream, 14,885 individual numbers in 114 species were observed at Gap Stream, 6,642 individuals in 90 species at Yudeung Stream and 4,202 individuals in 69 species at Daejeon Stream. Various indices of the birds were analyzed with respects to the similarities between streams. Gap Stream had similar characteristics to Yudeung Stream, and the latter was similar to Daejeon Stream. However, Gap Stream and Daejeon Stream showed different characteristics. The dominance index of each section was calculated using ten dominant bird species top-down. Subsequently, the birds and their preferred environment were analyzed. The results showed that shrub birds and arbor birds preferred the upper stream of every stream, while herons and dabbling ducks inhabited the midstream. Dabbling ducks and some diving ducks appeared downstream.

Phytohydrographic Plankton Studies during the First Half of the 20th Century in Korean Neritic Seas (20세기 전반 한국 근해역 플랑크톤의 식물수문학적 연구)

  • PARK, JONG WOO;KIM, HYUNG SEOP;YIH, WONHO
    • The Sea:JOURNAL OF THE KOREAN SOCIETY OF OCEANOGRAPHY
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    • v.24 no.3
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    • pp.483-494
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    • 2019
  • From the cosmopolitan superiority of the as the first world map completed in 1402 with surprisingly detailed images and contents on the Africa Continent it is reasonable to think that the Koreans in early fifteen century were already with highly up-to-date perspectives on the universe and world history and cultures. However, some 490 year later the first phytohydrographic plankton investigation in the neritic seas of Korea was performed by a Japanese company with sampling points covering from Tokyo Bay through Jeju neritic waters to Shanghai estuary, which was in turn preceded by the first oceanographic investigation other than the simple mapping Koreans seas by using two French sailboats. The first phytohydrographic plankton investigation in Korean seas were behind the world first oceanic plankton exploration, the German Plankton Expedition, by 25 years. Starting from the oceanographic investigation including phytohydrographic samplings in the whole Yellow Sea in 1915 the full-scale phytohydrographic plankton studies were tried in Korean seas which is well represented by the 1921 oceanographic investigation on the whole East Sea with 80 sampling stations. In 1932 two separate oceanographic investigations followed, one in the East Sea where 78 stations from Busan to southern Sakhalin Island were simultaneously visited by 50 research vessels for the physical, chemical, and biological oceanographic studies, and the other one in southern coast and western East Sea of Korea where ocean current observation as well as plankton sampling were made in 120 stations to understand the relationship between the ocean current and plankton distribution in the region. In 1933-1934 more intensified investigations on phytohydrography were carried out particularly in the East Sea as an integral part of the basic marine ecosystem studies for the Myeong-Tae (Alaska Pollock) resources estimation. Scientists' attitude for the marine investigation and research activities seemed to be almost unchanging even to the year 1943, which could be reflected by the fact that publication of the results from the investigations performed in 1945 were finally done in 1967 at Tokyo. Some 70 years later from the mid-twenty century we might be standing on the turning-point of "need to be prepared" for the new era of changing paradigm by reviewing, archiving, and analyzing the prior information big data from the previous ocean observation and biohydrographic investigations. At the same time each professional societies for the above mentioned sciences might trigger a continuous project to reorganize and update the records on related bibliography and its history every 30 years.

Evaluation of Land Use Change Impact on Hydrology and Water Quality Health in Geum River Basin (금강유역의 토지이용 변화가 수문·수질 건전성에 미치는 영향 평가)

  • LEE, Ji-Wan;PARK, Jong-Yoon;JUNG, Chung-Gil;KIM, Seong-Joon
    • Journal of the Korean Association of Geographic Information Studies
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    • v.22 no.2
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    • pp.82-96
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    • 2019
  • This study evaluated the status of watershed health in Geum River Basin by SWAT (Soil and Water Assessment Tool) hydrology and water quality. The watershed healthiness from watershed hydrology and stream water quality was calculated using multivariate normal distribution from 0(poor) to 1(good). Before evaluation of watershed healthiness, the SWAT calibration for 11 years(2005~2015) of streamflow(Q) at 5 locations with 0.50~0.77 average Nash-Sutcliffe model efficiency and suspended solid (SS), total nitrogen(T-N), and total phosphorus(T-P) at 3 locations with 0.67~0.94, 0.59~0.79, and 0.61~0.79 determination coefficient($R^2$) respectively. For 24 years (1985~2008) the spatiotemporal change of watershed healthiness was analyzed with calibarted SWAT and 5 land use data of 1985, 1990, 1995, 2000, and 2008. The 2008 SWAT results showed that the surface runoff increased by 40.6%, soil moisture and baseflow decreased by 6.8% and 3.0% respectively compared to 1985 reference year. The stream water quality of SS, T-N, and T-P increased by 29.2%, 9.3%, and 16.7% respectively by land development and agricultural activity. Based on the 1985 year land use condition. the 2008 watershed healthiness of hydrology and stream water quality decreased from 1 to 0.94 and 0.69 respectively. The results of this study be able to detect changes in watershed environment due to human activity compared to past natural conditions.

Analysis of Tree Growth Characteristics by First and Second Thinning in Korean White Pine Plantations (잣나무 인공림의 1차 및 2차 간벌에 따른 입목생장 특성 분석)

  • Lee, Daesung;Jung, Sunghoon;Choi, Jungkee
    • Journal of Korean Society of Forest Science
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    • v.111 no.1
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    • pp.150-164
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    • 2022
  • This study was conducted to provide basic information for the development of silvicultural guidelines and manuals. This was achieved through analysis of tree and stand characteristics according to the first and second thinning in Korean white pine plantations. Data were collected from permanent plots installed at Korean white pine plantations according to thinning intensity, and residual tree and stand variables, including diameter at breast height (DBH), volume, and mortality at age 19-43, were analyzed using data repeatedly collected in 4-5 measurements by experiments. According to one-way variance of analysis, tree DBH and volume were significantly different according to thinning intensity (p<0.05). DBH distribution was skewed to the left side over time as thinning intensity was heavier. Thus, tree DBH values were larger in heavy thinning plots with increased age. The periodic annual increment (PAI) of DBH was higher with heavier thinning intensity and fewer years after thinning. The PAI range by thinning intensity was 0.48-0.95 cm/year at age 19-24. In addition, the PAI increased in heavy thinning plots after the second thinning; The PAI range by thinning intensity was 0.29-0.67 cm/year after the second thinning at age 37-42. The PAI of tree volume differed according to thinning intensity, and the PAI value did not decrease obviously, in contrast to the pattern of the DBH PAI. Stand volume was generally higher in high-density stands, and the PAI of stand volume was high in unthinned and light thinning plots. Mortality was highest in unthinned plots, and the differences in mortality according to thinning intensity increased over time. Consequently, the growth of DBH and tree volume was lower as stand density increased, but this growth was facilitated with appropriate first and second thinning operations.