• 제목/요약/키워드: Differential display

검색결과 243건 처리시간 0.034초

완두(Pisum sativum L.) 근관의 생장과 관련된 표피세포의 분화와 유전자 발현 (Molecular Analysis of the Border Cell Differentiation in Root Cap of Pisum sativum L.)

  • 우호영;장매희
    • 식물조직배양학회지
    • /
    • 제22권3호
    • /
    • pp.169-173
    • /
    • 1995
  • 근관 표피세포(border cell)는 근관(root cap)의 최외각 세포층에서 분화된 단일세포로서, 물리적인 힘을 가하면 예를 들어 근관의 근관 표피세포를 물로 씻어내면, 20∼25시간 이후에는 새로운 층의 근관 표피세포가 근관에 형성된다. 이 새로운 층의 완두 근관 표피세포가 형성되는 동안 근관 표피세포가 제거된 근관에서는 새로운 유전자 발현이 일어나고 있음이 mRNA differential display로 확인되었다. 즉, 이들 근관에서 새롭게 발현되는 유전자들의 일부는 근관 표피 세포의 분화에 관련되어 있다고 볼 수 있다. 또한, 단일 세포로 분화된 근관 표피세포에서는 독특한 유전자 발현이 일어나고 있음이 mRNA differential display로 확인되었다. 이 결과로 알 수 있는 것은 근관 표피세포는 다른 조직(잎, 줄기, 뿌리와 근관 표피세포가 제거된 근관)과는 다른 독특한 기능을 가졌다는 것이다.

  • PDF

mRNA differential display를 이용한 철에 의해 조절되는 유전자들의 분리 및 동정 (Isolation and Identification of Genes Regulated by Iron Using mRNA Differential Display)

  • 이중림;박종환;김해영
    • Applied Biological Chemistry
    • /
    • 제42권2호
    • /
    • pp.123-127
    • /
    • 1999
  • 철은 사람에게 필수적인 영양소일 뿐 아니라 해로운 요소로도 작용한다. 이러한 철에 의해 진핵생물체에서 발현이 조절되는 유전자들을 밝히기 위해 철이 첨가되거나, 제거된 조건에서 배양된 HeLa세포로부터 RNA differential display 방법을 이용하여 발현 또는 억제되는 유전자들을 선별하였다. 모두 24개의 유전자가 선별되었으며, 염기배열 확인과 northern blot의 발현 확인과정을 거쳐 4개의 유전자들이 철에 의해 영향을 받는 것으로 확인되었다.

  • PDF

Isolation and Characterization of the Salicylic Acid Induced Gene in Rehmannia glutinosa by Differential Display

  • Kim, Hee-Jong;Kim, Kwon-Jong;Lee, Youn-Su
    • Mycobiology
    • /
    • 제30권2호
    • /
    • pp.88-92
    • /
    • 2002
  • Rehmannia glutinosa is a perennial medicinal plant belonging to the family Scrophulariaceae with more than 300 species known in the world, especially in temperate regions. Its roots have been used widely in Korea for medicinal purposes. However, it is commonly infected by various pathogens during storage, causing great damage to the roots, and impedes the intensive farming of the crop. Therefore, an attempt has been made to isolate and screen a resistance gene against the pathogen Fusarium oxysporum using differential display. We treated salicylic acid(SA), and isolated a resistance gene that responds to SA. As a result, we found that SA was involved in plant defense mechanism in pathogenicity tests with SA treated and non-treted plants, and we isolated a partial PR-la gene through differential display polymerase chain reaction(DD-PCR) method.

Identification of Differentially Expressed Genes in the Longissimus Dorsi Muscle Tissue between Duroc and Erhualian Pigs by mRNA Differential Display

  • Pan, P.W.;Zhao, S.H.;Yu, M.;Liu, B.;Xiong, T.A.;Li, K.
    • Asian-Australasian Journal of Animal Sciences
    • /
    • 제16권7호
    • /
    • pp.1066-1070
    • /
    • 2003
  • In order to identify differentially expressed mRNAs (which represent possible candidates for significant phenotypic variances of muscle growth, meat quality between introduced European and Chinese indigenous pigs) in the longissimus dorsi muscle tissue between adult Duroc and Erhualian pigs, mRNA differential display was performed. Five 3' anchor primers in combination with 20 different 5' arbitrary primers (100 primer sets) were used and nearly 5,000 cDNA bands were examined, among which 10 differential display cDNAs were obtained, cloned and sequenced. Six of the 10 cDNAs showed similarity to identified genes from GenBank and the other 4 had no matches in GenBank. Differential expression was tested by Northern blot hybridization and could be confirmed for 2 cDNAs. The method used in this study provides a useful molecular tool to investigate genetic variation that occurs at the transcriptional level between different breeds.

LCD TV용 고균일도 백라이트 구동을 위한 Differential Driving 인버터 (Differential Driving of Inverter for High Uniformity LCD TV Backlight)

  • 전영태;임성규
    • 마이크로전자및패키징학회지
    • /
    • 제11권2호
    • /
    • pp.37-41
    • /
    • 2004
  • LCD TV의 백라이트로서는 cold cathode flourescent lamp (CCFL)를 병렬로 구성한 직하방식의 백라이트 많이 사용되고 있다. 현재 각 각의 CCFL에 transformer 한개 씩을 사용하여 일정한 전류를 공급함으로서 백라이트의 균일도를 얻고 있으나 본 논문에서는 differential driving inverter를 이용하여 transfomer에 8개의 램프를 연결하여 구동함으로써 transformer의 개수를 현저히 줄일 수 있었다. Differential driving 방법을 이용하여 transformer 2개를 사용한 인버터를 제작하였으며 이를 이용하여 길이 450mm, 관경 4mm의 CCFL 16개를 사용한 26"용 LCD TV 백라이트를 구동할 수 있었다. 개발된 differential driving 인버터를 이용하여 백라이트를 구동한 결과 $88\%$ 이상의 휘도 균일도를 갖는 백라이트를 구현할 수 있었다.

  • PDF

Differential Display Analysis of Gene Expression Induced under DCA Treatment in Rat Liver

  • Choi, Soon-Yong;Park, Ock-Jin
    • BMB Reports
    • /
    • 제29권3호
    • /
    • pp.272-275
    • /
    • 1996
  • The expression of genes induced by Dichloroacetate (DCA) treatment was analyzed by mRNA differential display. Purified total RNAs from rat liver treated with saline or DCA (100 mg/100 g b.w.) were reverse transcribed by using a set of oligonucleotide primers. The PCR products were resolved on a denaturing sequencing gel. PCR band representing mRNA expressed specifically in DCA-treated liver was excised and reamplified by PCR. A 120-bp c-DNA clone named IC1 was isolated and the DNA sequence of IC1 was analyzed. IC1 revealed 50% homology with 3' end of a mouse fibroblast growth factor mRNA This result indicates that DCA induces the expression of a gene which has a 50% homology with a Mouse fibroblast growth factor, and expression of this gene might be involved in non genotoxic process caused by DCA.

  • PDF

cDNA Cloning of Farnesoic Acid-Induced Genes in Candida albicans by Differential Display Analysis

  • CHUNG SOON-CHUN;LEE JI-YOON;OH KI-BONG
    • Journal of Microbiology and Biotechnology
    • /
    • 제15권5호
    • /
    • pp.1146-1151
    • /
    • 2005
  • The yeast Candida albicans has a distinguishing feature, dimorphism, which is the ability to switch between two morphological forms: a budding yeast form and a multicellular invasive filamentous form. This ability has been postulated to contribute to the virulence of this organism. Previously, we reported that the yeast-to-hypha transition in this organism is suppressed by farnesoic acid, a morphogenic autoregulatory substance that accumulates in the medium as the cells proliferate. In this study, using a differential display reverse transcription polymerase chain reaction (DDRT-PCR) technique, we have identified several genes induced in C. albicans by farnesoic acid treatment. These observations indicate that farnesoic acid can alter the expressivity of multiple genes, including the DNA replication machinery and cell-cycle-control proteins.

Cloning and Characterization of Liver cDNAs That Are Differentially Expressed between Chicken Hybrids and Their Parents

  • Sun, Dong-Xiao;Wang, Dong;Yu, Ying;Zhang, Yuan
    • Asian-Australasian Journal of Animal Sciences
    • /
    • 제18권12호
    • /
    • pp.1684-1690
    • /
    • 2005
  • Using mRNA differential display technique, we investigated differential gene expression in hybrids relative to their parents in a diallel cross involving four chicken breeds in order to provide an insight into the molecular basis of heterosis in chicken. The results indicated that there was extensive differential gene expression between chicken F1 hybrids and their parents which was classified into four kinds of patterns as following: (1) bands only detected in hybrid F1; (2) bands only absent in hybrid F1; (3) bands only detected in parent P1 or P2; (4) bands absent in parent P1 or P2. Forty-two differentially expressed cDNAs were cloned and sequenced, and their expression patterns were confirmed by Reverse-Northern dot blot. Sequence analysis and database searches revealed that genes showed differential expression between hybrid and parents were regulatory and functional genes involved in metabolism, mRNA splicing, transcriptional regulation, cell cycles and protein modification. These results indicated that hybridization between two parents can cause changes in expression of a variety of genes. In conclusion, that the altered pattern of gene expression in hybrids may be responsible for heterosis in chickens.

해조류 김 Porphyra yezoensis 엽체로부터 산에 민감한 유전자의 분리 (Isolation of an Acid-Labile Gene from the Seaweed Porphyra yezoensis Tissue)

  • 진형주;박선미;;진덕희;공인수;홍용기
    • KSBB Journal
    • /
    • 제14권6호
    • /
    • pp.702-706
    • /
    • 1999
  • 대표적인 양식 해조류인 방사무늬 김 엽체를 대상으로 하여 산 처리에 의한 유전형질의 표현 변화를 differential display기법으로 비교하여 보았다. 방사무늬 김 엽체를 0.05% HCl을 첨가한 해수(pH 3.0)에서 5분간 처리한 후 각각 10분, 30분, 60분 그리고 4시간동안 멸균 해수에서 정치 배양시키면서, RNA를 추출하여 cDNA합성, PCR 증폭, agarose gel 전기영동 및 DNA 염기배열을 조사하였다. 그 결과 arbitrary primer OPA 1(CAGGCCCTTC)을 사용하여 differential display한 경우, 산 처리 후 30분간 멸균 해수에서 정치 배양한 엽체에서 특이적으로 RNA 합성이 일어나지 않은 유전자를 분리할 수 있었으며, 그 염기서열을 비교한바 이 유전자 fragment(605 bp)는 dethiobiotin synthetase 유전자와 93%의 높은 상동성을 가진 것으로 나타났다.

  • PDF

Ordered Differential Display from Cryphonectria parasitica

  • Kang, Hyun-Seok;Choi, Jin-Won;Park, Seung-Moon;Cha, Byeong-Jin;Yang, Moon-Sik;Kim, Dae-Hyuk
    • The Plant Pathology Journal
    • /
    • 제16권3호
    • /
    • pp.142-146
    • /
    • 2000
  • Ordered differential display using RT-PCR (ODD-PCR) was conducted to have a profile of the differently expressed genes between a hypovirulent strain of Cryphonectria parasitica (UEP1) and its isogenic wild type strain (EP155/2). ODD-PCR has advantages of high sensitivity, reproducibility, proportional representation, and limited number of primer combinations comparing with other differential display methods. RNAs were prepared from 1 and 5 day liquid culture of both hypovirulent and wild type strains, and were further evaluated with the marker genes of C. parasitica such as cryparin and mating factor MF2-1, which were already proven to be specifically down-regulated by the presence of mycovirus CHV1-713. ODD-PCR was conducted using those RNAs and expressed genes were categorized to five groups according to their temporal and quantitative expression patterns. Those fives groups are CPC, CPE, CPL, CPD, and CPU which represent constitutively-expressed, early-expressed, late-expressed, down-regulated, and up-regulated, respectively. Ninety two primer combinations out of a total of 192 have been tested so far. Among the twenty to fifty distinct bands per each reaction, an average of four to ten genes was identified as viral-regulated fungal genes. Those viral-specifc genes were further analyzed by DNA sequencing followed by homology search. Characterization of 30 clones including all five groups were conducted as a preliminary data and more are under investigation.

  • PDF