• Journal of the Korean Society for Library and Information Science
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• v.49 no.3
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• pp.81-107
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• 2015

This study describes the Bottom-up method for implementation of an ontology system from the RDB. The STNet, a structured terminology glossary based on RDB, was served as a test bed for converting to RDF ontology, for generating the inference rules, and for evaluating the results of the semantic search. We have used protege editor of the ontology developing tool to design ontologies with test data. We also tested the designed ontology with the Inference Engine (Pellet) of protege editor. The generated reference rules were tested by TBox and SPARQL queries through STNet ontology. The results of test show that the generated reference rules were verified as true and STNet ontology were also evaluated to be useful for searching the complex combination of semantic relation.

• Proceedings of the Plant Resources Society of Korea Conference
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• 2019.10a
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• pp.25-25
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• 2019

Chromosome numbers and karyotypes in flowering plants have been considered to be prominent features in taxonomic and evolutionary context. Despite the increasing numbers of cytological studies in Asteraceae, karyotype analysis of Cirsium Mill. and Carddus L. in Korean population have not been performed carefully. In this study, the chromosome numbers and karyotype analysis of all eight species of the genus Cirsium Mill. and one species of Carddus L. were analyzed. While the chromosome number in Carduus crispus L. was diploid (2n = 2x = 18 or 18+2Bs) with x = 9 as the base chromosome number, all seven species of Cirsium were diploid with x = 17 except for Cirsium lineare (Thunb.) Sch. Bip. (x = 14). The chromosome number in C. pendulum Fisch. ex DC. presented 2n = 2x = 34 from two populations and C. lineare exhibited 2n = 2x = 28 from one population. Aneuploidy was occasionally found in C. japonicum Fisch. ex DC. var. spinossinum Kitam. (2n = 2x = 34, 35, 36), C. rhinoceros (H. $L{\acute{e}}v.$ & Vaniot) Nakai (2n = 2x = 32, 34), C. setidens (Dunn) Nakai (2n = 2x = 30, 31, 32) and C. vlassovianum Fisch. ex DC. (2n = 2x = 31, 32). While Cirsium japonicum Fisch. ex DC. var. japonicum possessed several B-chromosomes (2n = 2x = 34, 35, 36), polyploidy was only encountered in Cirsium nipponicum (Maxim.) Makino. (2n = 4x = 68) from two populations in Ulleung Island. The present cytological data might be contributed to the taxonomic and evolutionary studies in the genus Cirsium.

• Korean Journal of Plant Taxonomy
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• v.34 no.4
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• pp.297-319
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• 2004

Morphological characters of 14 taxa in 6 sections Ischnostachya(one taxon), Anomalae(one taxon), Capitellatae (five taxa), Debiles (one taxon), Capillares (one taxon) and Molliculae (five taxa) of genus Carex (Cyperaceae) were reexamined. The epidermal patterns of perigynium, achene and leaf were investigated using by using a scanning eletron microscope (SEM) and a light microscope (LM). Morphological characters such as rhizome, spike, width of leaf, leaf sheath, involucre, involucre sheath, beak of perigynium, perigynium shape, and leaf epidermal patterns were useful for the identification of observed fourteen taxa. The number of spike, arrangement of psitillate or staminate spike and presence of bract were very useful characters to divide the treated 14 taxa into two groups. A key based on data was presented here.

• Journal of Plant Biology
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• v.27 no.2
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• pp.61-72
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• 1984

The concept of natural grouping of plant designated as the "Amentiferous" is no longer given serious credence, and many of the families included in this grouping have been dispersed in diverse order. Because a review of taxonomic treatments of amentiferous taxa reveals diverse classifications, it has become necessary to investigate new characteristics and attempt to determine the significance of these characteristics in terms of amentiferous taxonomy. Protein analyses by isoelectrofocusing(IEF) and rocket immunoelectrophoresis(RIE) have proved to be useful in the delicitation of Quercus taxa using pollen extracts from selected taxa. When Quercus pollen extracts were separated by electrophoresis based on their isoelectric points in a stable pH gradient and substrates for estrase activity were stained, ten bands were revealed between pH 5-14. Within Lepidobalanus grouping, a great diversity in the pollen protein zymograms was observed with some segregation corresponding to the designated taxonomic sections. Two taxa of Cyclobalanopsis produced a zymogram that is somewhat similar to taxa included within the section Prinus of Lepidobalanus, and less similar to taxa within the section Cerris of the same subgenus. Three tested taxa of the Cerris are in the similar zymogram each other, being segregable from the taxa of Prinus. Quantitative and qualitative analyses for serological relationships within and among th Quercus were also employed. To calculate the degree of protein similarity, total rocket heights obtained from RIE provided an index of serological correspondence(SC). It is reconfirmed that the Quercus is distantly separated from the Fagus according to SC. Comparative data from rocket number and SC in the tested taxa of Quercus also indicate that Lepidobalanus is separable from Cyclobalanopsis. Within the Lepidobalanus Q. acutissima and Q. acutissima x variabilis are almost homogeneors and distinguishable from the other tested taxa of same subgenus. Although the number of taxa tested has been limited, the overall serological evidence best reflects the classification proposed by Redher(1940) and Melchior (1964), having the genus Quercus subdivided into three subgunera: Erythrobalanus, Lepidobalanus, and Cyclobalanopsis.alanopsis.

• Korean Journal of Plant Taxonomy
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• v.48 no.4
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• pp.278-288
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• 2018

Polyploidization plays an important role in generating the current high diversity of plants. Studies of the distributional patterns of diploid and derivative polyploid races have provided important insights into the evolutionary process and cryptic speciation by polyploidization within and between closely related taxa defined on the basis of their morphology. Allium thunbergii and A. sacculiferum, occurring throughout eastern Russia, eastern China, Korea, and Japan, are examples of closely related species with unsolved taxonomic relationships. A total of 97 and 65 individuals from 26 and 13 populations of A. thunbergii (including var. thunbergii, var. deltoids, and var. teretifolium) and A. sacculiferum, respectively, were studied to determine their ploidy. The geographic structure and habitat differentiation of the cytotypes were also analyzed. The main cytotype of A. thunbergii was diploid (92.3% in total; the rest were tetraploids). In contrast, the majority of A. sacculiferum plants were tetraploids (69.2% of the total; the rest were diploids). No populations of the studied taxa harbored both cytotypes. Allium thunbergii was more often found at higher elevations than A. sacculiferum, and it tended to occur more frequently on rocky slopes and below forests in mountainous areas. On the other hand, A. sacculiferum occurred at forest margins and in lowland pastures. The cytotypes differed with respect to the elevation; diploids were found more frequently at higher elevations than tetraploids. The results of this study and additional biosystematics data indicate that the morphological characteristics of A. thunbergii and A. sacculiferum may be influenced by polyploidization and by their adaptation to various habitat conditions and that A. thunbergii and A. sacculiferum do not clearly fulfill the requirements of any species concept. Consequently, we propose that A. sacculiferum be considered as an additional synonym of A. thunbergii. Additionally, Allium thunbergii var. deltoides is unified into A. thunbergii var. thunbergii.

• The Sea:JOURNAL OF THE KOREAN SOCIETY OF OCEANOGRAPHY
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• v.24 no.3
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• pp.448-456
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• 2019

From the 1890s to the 1900s, Modern Japan investigated the sea of Korea (Joseon Dynasty) several times. The records of investigation result were "Fishery Circumstances of Korean Sea"(1893), "Official Trip Report on Wonsan Area of Korea"(1895), "Nautical Publication of Korea"(1894), "Patrol Reports of Korea Fishery Association"(1898~1900), "Fishery Guide for Korean Sea"(1903) and "Chronicles of Korea Fisheries"(1908~1911). Although these surveys were conducted more than 100 years ago, they provide a glimpse into the fishing situation of Korea as well as the lives of residents in the coastal areas. In particular, Chronicles of Korean Fisheries is a vast collection of four volumes, and it has much to do with the history and culture of Korea, including marine products from the coastal waters, the population of coastal villages, the number of people engaged in fishing, and the number of fishing boats and nets. From the perspective of the development of fisheries studies, the modern classification of marine products after Linne has already been applied, and the classification of those days is quite different from that of the present classification, so it can be said to be an interesting data from the viewpoint of animal and plant taxonomy.

• Korean Journal of Plant Taxonomy
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• v.49 no.3
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• pp.261-264
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• 2019

Eupatorium rugosum Houtt. is known to be an alien invasive species and is listed as an ecosystem disturbance species in Korea. There is also an eastern North American species Ageratina altissima (L.) R. M. King & H. Rob. similarly dispersed in Korea. This article aims to clarify the taxonomic confusion regarding the species. The two names refer to the same species originally described as Ageratum altissimum by Linnaeus in his Species Plantarum. Ageratum altissimum was transferred to the genus Eupatorium and later to Ageratina. Eupatorium rugosum is the replacement name in Eupatorium because of E. altissimum L., an existing name based on the different type. When the species was transferred to Ageratina, A. altissima was published based on its basionym, as the epithet "altissima" was available in the genus. It seems that taxonomic confusion regarding the species in Korea is due to the recognition of the names as different taxa. Ageratina altissima is the correct name for the species based on morphological and molecular data.

• Mycobiology
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• v.48 no.6
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• pp.450-463
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• 2020

The strains 17E-042, 17E-039, and NC13-171 belong to Ascomycota and were isolated from soil collected from Sancheong-gun and Yeongam-gun, Korea. The strain 17E-042 produced white mycelial colonies that developed a sienna color with a round margin on potato dextrose agar (PDA), and the reverse side developed a light sienna color. Morphologically, this strain was similar to the strains of Arthrinium phragmites and A. hydei, but the shorter conidial size of the newly identified strain (17E-042) was distinct. The strain 17E-039 produced macroconidia that were pale yellow to orange-brown, elongated-ellipsoid to oblong, round at both ends, primarily straight but sometimes slightly curved, 0-septate, thin-walled, and filled with numerous droplets, having diameters of 20.4-34.3 × 8.0-12.0 ㎛. And the strain NC13-171 formed hyaline to light brown chlamydospores, solitary or in a chain. Multigene phylogenetic analyses were conducted using sequence data obtained from internal transcribed spacer (ITS) regions, 28S rDNA large subunit (LSU), β-tubulin (TUB2), translation elongation factor 1-alpha (TEF1-α), and RNA polymerase II large subunit (RPB2) genes. The results of molecular phylogeny, the detailed descriptions and illustrations of each species strongly support our proposal that these strains from soil in Korea be designated as Arthrinium minutisporum sp. nov. and two new records of Pezicula neosporulosa and Acrocalymma pterocarpi.

• Journal of Plant Biotechnology
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• v.49 no.2
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• pp.139-144
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• 2022

The genus Prunus (family: Rosaceae) consists of over 400 plant species and exhibits vast biodiversity worldwide. Given the wide distribution of this genus, its taxonomic classification is important. Anatomical characteristics are conserved and stable and can therefore be used as an important tool for the taxonomic characterization of plants. Therefore, this study aimed to assess and document the anatomical characteristics of the leaf, stem, and seed of P. africana using micrographs and photographs for possible use in the identification, quality control, and phylogenetic analysis of the species. The anatomical sections of a young stem revealed a cortex consisting of isodiametric parenchyma cells, druse crystals, primary vascular bundles, and pith. The mature stem bark majorly consisted of the rhytidome, with the periderm densely arranged in multiple layers; a cluster of stone cells; and sclerenchyma. The leaf sections were hypostomatic, with stomata sizes ranging from 18.90-(22.34)-26.90 × 15.41-(18.40)-21.22 ㎛. The leaf sections showed the presence of characteristic druse crystals, vascular bundles, and mesophyll layers. The pericarp contained the epicarp, mesocarp, and endocarp, with their thickness being approximately 350-400, 300-350, and 30-50 ㎛, respectively. In addition, it contained a seed testa with a thickness of approximately 50-60 ㎛. The morphological and anatomical characteristics observed in P. africana leaves, stems, and seeds in this study could serve as useful data for the taxonomic identification of this species.