• Title/Summary/Keyword: DBT

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Hybrid Capture 2 Assay Based Evaluation of High-Risk HPV Status in Healthy Women of North-East India

  • Rai, Avdhesh Kumar;Das, Debabrata;Kataki, Amal Chandra;Barmon, Debabrata;Aggarwal, Dippy;Deka, Pankaj;Shrivastava, Sushruta;Sharma, Jagannath Dev;Sarma, Anupam;Baruah, Upasana;Sharma, Mousumi
    • Asian Pacific Journal of Cancer Prevention
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    • v.15 no.2
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    • pp.861-865
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    • 2014
  • Background: High risk HPV (HR-HPV) testing has been recommended as an effective tool along with cytology screening in identification of cervical intraepithelial lesions (CINs) and prevention of their progress towards invasive cervical cancer. The aim of this study was to assess the HR-HPV DNA status by Hybrid Capture 2 (HC2) assay in healthy asymptomatic women of North-East India. Materials and Methods: This study examined cervical cell samples of forty three (n=43) healthy women by HC2 assay. A High Risk HPV DNA kit (Qiagen) was used which can detect 13 high risk HPV types: 16, 18, 31, 33, 35, 39, 45, 51, 52, 56, 58, 59 and 68. Results: The mean relative light units (RLU) for samples was in the range of 141-5, 94, 619. HR-HPV DNA was confirmed in 16% (7/43) of participant women samples. Among demographic and clinical parameters, menstrual irregularity (p=0.039) and infection history (p=0.028) has shown statistically significant differences between the HR-HPV-positive and negative groups. In the HR-HPV positive group, two women were confirmed for CINs after colposcopy and histopathologic examination. Conclusions: We suggest that there may be an association between irregular menstruation and infection history of the urogenital tract with HR-HPV DNA prevalence in North-East Indian asymptomatic women. HC2 assay can be a valuable tool for HR-HPV screening.

Nested Multiplex PCR Based Detection of Human Papillomavirus in Cervical Carcinoma Patients of North- East India

  • Das, Debabrata;Rai, Avdhesh Kumar;Kataki, Amal Chandra;Barmon, Debabrata;Deka, Pankaj;Sharma, Jagannath Dev;Sarma, Anupam;Shrivastava, Sushruta;Bhattacharyya, Mouchumee;Kalita, Apurba Kumar;Sharma, Mousumi;Ahmed, Shiraj
    • Asian Pacific Journal of Cancer Prevention
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    • v.14 no.2
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    • pp.785-790
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    • 2013
  • Background: Persistent infection of one or more of about 15 high-risk human papillomaviruses (HR-HPVs), most commonly HPV types 16/18, has a significant role in cervical cancer initiation and progression. There are limited data available from north-east India about HPV prevalence though this region has high incidence rates of cervical cancer. The aim of this study was to investigate the HPV genotypes prevalent in cervical cancer patients of north-east India. Materials and Methods: We analyzed 107 cervical cancer patient samples. Nested multiplex PCR assays were employed for detection of 13 high risk and 5 low risk HPV types. Results: HPV was confirmed in 105 samples. The presence of 6 'carcinogenic' HPV types, HPV-16 (88%), -18 (15%), -31(4%),-45 (3%), -59 (4%), -58(1%), and one non carcinogenic, HPV-6/11 (6%), was recorded. Among various demographic and clinical factors only tumour stage showed a statistically significant association with HPV type infection (P=0.019). Conclusions: We suggest that the most prevalent genotype is HPV-16 followed by HPV-18 in cervical carcinoma patients of the north-eastern region of India. Advanced tumour stage may be associated with increased possibility of harbouring multiple HPV genotypes.

Synthesis and Physical Properties of Decylbithiophene End-Capped Oligomers Based on Naphthalene, Anthracene and Benzo[1,2-b:4,5-b']dithiophene

  • Jang, Sang-Hun;Tai, Truong Ba;Kim, Min-Kyu;Han, Jeong-Woo;Kim, Yun-Hi;Shin, Sung-Chul;Yoon, Yong-Jin;Kwon, Soon-Ki;Lee, Sang-Gyeong
    • Bulletin of the Korean Chemical Society
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    • v.30 no.3
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    • pp.618-622
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    • 2009
  • The new candidates for OTFTs, which were composed of naphthalene, anthracene, benzo[1,2-b:4,5-b’]dithiophene and 2-decylbithiophene end-capper were synthesized under Suzuki coupling reaction conditions. All of the oligomers were characterized by FT-IR, mass analysis, UV-vis, PL spectrum, cyclic voltametry (CV), differential scanning calorimetry (DSC), thermal gravimetric analysis (TGA), $^1H-NMR\;and\;^{13}C-NMR$. Investigation of physical properties showed that all of the oligomers have higher oxidation potential and good thermal stability. Especially, DBT-DtB-DBT is soluble in common solvents and suitable for low cost processing technologies.

Effect of Endocrine Disruptors on the Oocyte Maturation and Ovulation in Amphibians, Rana dybowskii

  • Choi, Mee-Jeong;Kim, Seung-Chang;Kim, An-Na;Kwon, Hyuk-Bang;Ahn, Ryun-Sup
    • Animal cells and systems
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    • v.11 no.1
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    • pp.1-8
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    • 2007
  • Recently, we have shown that some endocrine disruptors, heavy metals, organotins and azoles suppressed steroidogenic enzymes such as P450 side-chain cleavage enzyme (P450scc) and aromatase in bullfrog ovarian follicles. In the present study, by using an amphibian ovarian follicle culture system, we examined the effects of these endocrine disruptors on maturation and ovulation of oocytes from Rana dybowskii in vitro. Ovarian fragments or isolated follicles were cultured for 24 h in a medium containing frog pituitary homogenate (FPH) or progesterone ($P_{4}$) with or without endocrine disruptors, and oocyte maturation (germinal vesicle breakdown, GVBD) and ovulation were examined. Among the organotins, tributyltin (TBT) strongly inhibited both FPH-and $P_{4}-induced$ oocyte maturation ($ED_{50}$:0.6 and 0.7 ${\mu}M$, respectively); however, tetrabutyltin (TTBT) and dibutyltin (DBT) showed only partial suppression, while monobutyltin (MBT) showed no inhibitory effect. All of the organotins suppressed $P_{4}-induced$ oocyte ovulation very effectively at a low concentration, and TBT and DBT exerted an inhibitory effect on FPH-induced ovulation. Among the heavy metals, mercury (Hg), cadmium (Cd) and cobalt (Co) were very effective in inhibiting FPH-induced oocyte maturation and ovulation, while lead (Pb), arsenite (As) and zinc (Zn) were less effective. However, all of the heavy metals suppressed FPH-induced oocyte ovulation at a high dose ($100{\mu}M$). Among the azoles, itraconazole (ICZ), ketoconazole (KCZ) and clotrimazole (CTZ) effectively inhibited FPH-induced oocyte maturation and ovulation, while econazole (ECZ), miconazole (MCZ) and fluconazole (FCZ) were considerably less effective. These results demonstrated that the abovementioned endocrine disruptors exhibited differential effects on oocyte maturation and ovulation in amphibian follicles and that the frog ovarian culture system could be used as an effective experimental tool to screen and evaluate the toxicity of various endocrine disruptors in vitro.

Analysis of Organotin Compounds in Fish and Shellfish from Guryongpo Harbor (구룡포항 어패류에 함유된 유기주석화합물 분석)

  • Kim, Mee-Ra;Kim, Sung-Hong
    • Korean Journal of Human Ecology
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    • v.14 no.1
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    • pp.209-216
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    • 2005
  • The concentrations of organotin compounds in fish and shellfish from Guryongpo harbor were analyzed. The concentrations of TBT, DBT and MBT in fish were in the range of $15.68{\sim}52.93\;ng/g$(average 28.65 ng/g), $13.95{\sim}72.16\;ng/g$(average 26.99 ng/g) and $37.73{\sim}133.59\;ng/g$(average 85.18 ng/g), respectively. The BT compound concentrations in intestine of fish were higher than those in muscle. Overall ranges of TBT, DBT and MBT concentrations in shellfish were $42.15{\sim}56.13\;ng/g$(average 50.94 ng/g), $34.16{\sim}52.82\;ng/g$(average 42.79 ng/g) and $41.25-72.60\;ng/g$(average 53.71 ng/g), respectively. The BT compound concentrations of shellfish were higher than those of fish. The concentrations of TPT and DPT in fish were $0.47{\sim}3.90\;ng/g$(average 2.33 ng/g) and $ND{\sim}0.56\;ng/g$(average 0.15 ng/g), but MPT was not detected. The concentrations of TPT, DPT and MPT in shellfish were in the range of $10.24{\sim}21.67\;ng/g$(average 17.45 ng/g), $3.32{\sim}4.78\;ng/g$(average 3.91 ng/g) and $0.11{\sim}0.36\;ng/g$(average 0.25 ng/g), respectively. In addition, the MBT ratio was highest among BT compounds, but the TPT ratio was the highest among PT compounds. Taken together, the concentrations of organotin compounds in fish and shellfish from Guryongpo harbor was not higher than those from other harbors in Korea.

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Analysis of the types of eating behavior affecting the nutrition of preschool children: using the Dietary Behavior Test (DBT) and the Nutrition Quotient (NQ) (유아의 영양상태에 영향을 미치는 식행동 유형 분석 : 어린이 식행동 검사 (DBT)와 어린이 영양지수 (NQ) 활용)

  • Sim, Hyeon Mi;Han, Youngshin;Lee, Kyung A
    • Journal of Nutrition and Health
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    • v.52 no.6
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    • pp.604-617
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    • 2019
  • Purpose: To investigate the effect of eating behavior on nutritional status according to temperament type. Methods: One thousand one hundred three preschool children aged 2 to 6 years in Gyeongsan, Gyeongsangbuk-do from April to June 2018 were surveyed about their eating behavior and nutritional status using DBT (Dietary Behavior Test) and NQ (Nutrition Quotient) which are proven tests. The dietary behaviors of the children were classified into four categories: approach avoidance, sensory sensitivity, hyperactivity, and irregularity. NQ scores were divided into five categories: balance, diversity, moderation, regularity, and practice. Results: The mean of the children's age was 3.42 ± 1.4 (596 boys and 507 girls). The percentage distribution of the NQ grade was as follows: 5.5% (highest), 12.5% (high), 47.1% (medium), 22.2% (low), and 12.6% (lowest). The risk group of approach avoidance and sensory sensitivity had significantly (p < 0.001) lower scores than the normal group in balance factor (51.9 ± 12.0 vs. 57.8 ± 15.9 in approach avoidance type, 52.6 ± 17.6 vs. 57.7 ± 15.9 in sensory sensitivity type) and diversity factor (32.5 ± 24.4 vs. 50.1 ± 22.4 in approach avoidance type, and 32.5 ± 24.0 vs. 50.7 ± 22.2 in sensory sensitivity type). The scores of the hyperactivity risk group were significantly lower in moderation factor (78.2 ± 12.1 vs. 81.2 ± 11.9), and those of the irregular risk group were significantly lower in variety (35.9 ± 24.5 vs. 48.8 ± 23.2), regularity (57.6 ± 37.1 vs. 66.1 ± 17.6), and practice (57.1 ± 19.4 vs. 65.1 ± 22.5) factors than the normal group (p < 0.001). Especially, the risk group of approach avoidance and sensitivity type had significantly (p < 0.001) lower intakes of whole grain, fruit, bean and bean products, vegetables, and Kimchi. Conclusion: This present study suggested that the eating behavior based on temperament of demanding preschool children affected food choice resulting in food consumption diversity of children. Therefore, it is important to provide customized nutrition education programs based on temperament type.

Butyltins in Surface Sediments of Kyeonggi Bay, Korea

  • Kim, Gi-Beum;Tanabe, Shinsuke;Koh, Chul-Hwan
    • Journal of the korean society of oceanography
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    • v.33 no.3
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    • pp.64-70
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    • 1998
  • Forty sediment samples from Kyeonggi Bay, Korea were analyzed for butyltins, including tributyltin (TBT), dibutyltin (DBT), and monobutyltin (MBT) to determine their distribution and source in this area. Total butyltin concentrations in Kyeonggi Bay sediments ranged from 0.8 to 297 ng/g dry wt. with a mean value of 38 ng/g. The highest butyltin concentration was found in the innermost site in Incheon Harbor basin. The mouth of Han River had higher butyltin levels in sediments compared to open ocean. Butyltin levels correlated well with organic carbon content of sediment, but the major factor was the distance from the source area where antifouling paints were used for vessels and marine structures. Butyltin concentrations in the study area were lower than those reported for bays in other parts of the world. Considering the high toxic potential and sediment/water partition coefficient of TBT, further studies are needed to assess its biological effect in the marine ecosystem of Kyeonggi Bay.

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원자력시설 IEMI 위협 취약성 평가를 위한 시나리오 평가 방법론 개발

  • Ryu, Jinho;SONG, DONG HOON
    • Review of KIISC
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    • v.29 no.6
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    • pp.49-52
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    • 2019
  • 원자력시설 등의 방호 및 방사능 방재 대책법에 따라 2018년 개정된 설계기준위협(DBT)은 전자적 침해행위 중 하나로 의도적 전자기파 간섭(IEMI) 위협을 반영하였으며, 이에 따라 원자력시설은 IEMI 위협에 대한 물리적방호시책을 마련하여야 한다. 한국원자력통제기술원(KINAC)은 개정 설계기준위협에 따라 2018년 원자력시설의 고출력 전자기파 방호 심·검사 기준(KINAC/RS-020)을 개정하여 원자력시설의 IEMI 위협에 대한 취약성 평가 방법론을 제시하고 있다. 본 논문은 KINAC/RS-020에 따른 원자력시설 IEMI 위협 취약성 평가를 위해 개발 중인 IEMI 위협에 대한 시나리오 평가 방법론에 대해 소개한다.

Virtual Platform based on OpenRISC (OpenRISC 기반의 버츄얼 플랫폼)

  • Jang, HyeongUk;Lee, Jae-Jin;Byun, Kyungjun;Eum, Nakwoong;Jeong, Sangbae
    • Smart Media Journal
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    • v.3 no.4
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    • pp.9-15
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    • 2014
  • A virtual platform models a processor core and the peripheral devices constituting the SoC in software. Major companies utilize a variety of platforms for product development with optimal SW+SoC integrated system architecture design and IP reuse based Top-Down design flow using a virtual platform. In this paper, we propose a virtual platform based on OpenRISC, an open source RISC based core. The proposed virtual platform supports high speed emulation of approximately 20 MIPS using DBT (Dynamic Binary Translation).

Slurry Phase Reaction of Elemental Silicon with Methanol in the Presence of Copper: Direct Synthesis of Trimethoxysilane

  • Han, Joon-Soo;Cho, Joo-Hyun;Lee, Myong-Euy;Yoo, Bok-Ryul
    • Bulletin of the Korean Chemical Society
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    • v.30 no.3
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    • pp.683-686
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    • 2009
  • Slurry phase reaction of elemental silicon with methanol has been studied in the presence of copper using a small amount of cuprous chloride as an activator in DBT (dibenzyltoluene) at various temperatures from 200 ${^{\circ}C}$ to 320 ${^{\circ}C}$. Trimethoxysilane (1a) with a Si-H unit was obtained as the major product and tetramethoxysilane (1b) as the minor product. The reaction worked well using a 0.5 wt % CuCl as an activator. The optimum temperature for this direct synthesis of 1a was 240 ${^{\circ}C}$. Methoxysilanes were obtained in 95% yield with 81% selectivity to 1a from 85% conversion of elemental silicon.