• 제목/요약/키워드: Cytochrome c oxidase

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DNA Barcoding of Eurydice longiantennata (Isopoda, Cymothooidea, Cirolanidae) from South Korea

  • Kim, Sung Hoon;Choi, Hyun Ki;Kim, Jong Guk
    • Animal Systematics, Evolution and Diversity
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    • 제37권4호
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    • pp.354-357
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    • 2021
  • In Korean waters, the cirolanid isopod, Eurydice longiantennata Nunomura and Ikehara, 1985 has been reported only from the subtidal zone of Jeju island. We obtained the mitochondrial cytochrome c oxidase subunit I (COI) sequences of this species and determined the DNA barcoding data of E. longiantennata based on a genetic comparison of E. longiantennata and its congeners. The intra-specific genetic distance between the three COI sequences of E. longiantennata ranged from 0 to 0.6%. The inter-specific distances between E. longiantennata and other cirolanid isopods ranged from 24 to 33.2%. In this study, we provided the DNA information of E. longiantennata with a morphological diagnosis and images of the species.

한국산 새다래과(Bramidae) 어류 1미기록종, Taractes rubescens (Jordan and Evermann, 1887) (First Reliable Record of the Keeltail Pomfret Taractes rubescens (Bramidae: Perciformes) from Korea)

  • 이재환;이우준;김진구
    • 한국수산과학회지
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    • 제52권3호
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    • pp.283-287
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    • 2019
  • Two specimens of Taractes rubescens (family Bramidea) were collected from Busan and Pohang, Korea, between 2015 and 2016. Taractes rubescens was very similar to Taractes asper, but the two species are clearly distinguishable by the number of anal fin rays (21-23 in T. rubescens vs. 25-27 in T. asper) and the presence of a lateral caudal keel (present in T. rubescens vs. absent in T. asper). The mitochondrial DNA cytochrome c oxidase subunit I sequences of the specimens described in this paper perfectly matched those of T. rubescens, but differed from those of T. asper (genetic distance: 6.9%). We use the Korean common name proposed by Kim and Ryu (2017) for T. rubescens, "Geom-eun-sae-da-rae".

Leptoplax doederleini (Polyplacophora: Acanthochitonidae) from South Korea

  • Shin, Youngheon;Park, Jina;Lee, Yucheol;Kim, Taeho;Park, Joong-Ki
    • Animal Systematics, Evolution and Diversity
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    • 제35권1호
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    • pp.10-14
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    • 2019
  • Acanthochitonidae Pilsbry, 1893 is one of the chiton families characterized by 9 pairs of sutural tufts on a well-expanded girdle that overgrows plates. It is found in intertidal and subtidal zones worldwide. Of its eight genera, only two have been previously reported in South Korea: Acanthochitona Gray, 1821 and Notoplax H. Adams, 1862. Here we report Leptoplax doederleini (Thiele, 1909) as the first record of the genus Leptoplax in South Korea and describe and compare its morphological features with N. kaasi Hong, Dell'Angelo and Van Belle, 1990. In addition, we provide the partial sequence of the mitochondrial DNA cytochrome c oxidase subunit I gene as a DNA barcode sequence record.

Dendrodoris guttata (Nudibranchia: Dendrodorididae) from Korean Waters

  • Park, Jina;Lee, Yucheol;Shin, Youngheon;Kim, Taeho;Park, Joong-Ki
    • Animal Systematics, Evolution and Diversity
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    • 제35권1호
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    • pp.6-9
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    • 2019
  • The genus Dendrodoris Ehrenberg, 1831 includes about 46 valid species worldwide, and is found in relatively shallow waters in the Indo-Pacific, Atlantic, and Australian regions. To date, five Dendrodoris species have been reported from Korea. In this study, we report D. guttata (Odhner, 1917) collected from Jeju Island. Morphology is distinguished from other Dendrodoris species by the shape of the black spots on the dorsal mantle and coloration of the gills. We determined mitochondrial cytochrome c oxidase I (cox1) partial sequences and combined them with publically available sequences of closely related congeneric species to examine its phylogenetic position among Dendrodoris species.

DNA Barcoding for the Hydrothermal Vent Crab Austinograea Species (Crustacea: Bythograeidae) from the North Fiji Basin, Southwestern Pacific Ocean

  • Lee, Won-Kyung;Ju, Se-Jong;Hou, Bo Kyeng;Kim, Se-Joo
    • Animal Systematics, Evolution and Diversity
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    • 제35권1호
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    • pp.30-32
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    • 2019
  • The brachyuran crab Bythograeidae Williams, 1980 is common in hydrothermal vent fields worldwide and has recorded to sixteen species of six genera. In this study, we firstly determined the cytochrome c oxidase subunit 1 (CO1) DNA barcodes for the fifth species of Austinograea, A. hourdezi, from hydrothermal vent regions of the North Fiji Basin in southwestern Pacific Ocean. All CO1 DNA barcodes of A. hourdezi were identical. The interspecies variations of three bythograeid genera were 10.9-13.3% for Austinograea, 6.6-15.7% for Bythograea, and 9.7% for Gandalfus. These results would be helpful to understand taxonomy of brachyuran crabs living in hydrothermal vent fields using CO1 DNA barcodes.

First Genetic Data of Nebalia koreana (Malacostraca, Leptostraca) with DNA Barcode Divergence among Nebalia Species

  • Song, Ji-Hun;Min, Gi-Sik
    • Animal Systematics, Evolution and Diversity
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    • 제35권1호
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    • pp.37-39
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    • 2019
  • We determined the cytochrome c oxidase subunit 1 (CO1) sequences of Nebalia koreana Song, Moreira & Min, 2012 (Leptostraca) collected from five locations in South Korea, and this represents the first genetic data of this species. The maximum intra-species variation was 1.2% within Nebalia hessleri Martin, Vetter & Cash-Clark, 1996, while inter-species variation ranged from 9.0% (N. hessleri and Nebalia gerkenae Haney & Martin, 2000) to 34.8% (N. hessleri and Nebalia pseudotroncosoi Song, Moreira & Min, 2013). This result is well agreed with the interspecific relationships among Nebalia species based on morphological characteristics. In conclusion, this study showed the usefulness of CO1 sequences as a DNA barcode within the genus Nebalia Leach, 1814.

Three Feather Mites (Acari: Sarcoptiformes) Isolated from Black-Tailed Godwit, Limosa limosa in Korea

  • Han, Yeong-Deok;Min, Gi-Sik
    • Animal Systematics, Evolution and Diversity
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    • 제35권3호
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    • pp.105-113
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    • 2019
  • Feather mites comprise two superfamilies(Analgoidea and Pterolichoidea) and are highly specialized ectosymbionts of birds. To date, this group contains more than 2,500 species worldwide. Fifty-five feather mite species have been reported in Korea, and only one species of genus Alloptes has been recorded from black-tailed godwit Limosa limosa. Three new records of feather mites from the L. limosa in Korea are added in this study: Avenzoaria punctata Gaud, 1972, Bregetovia limosae (Buchholz, 1869), and Montchadskiana buchholzi (Canestrini, 1878). The genus Bregetovia Dubinin, 1951 is also new report for this country. In this paper, we provide the morphological descriptions and illustrations based on the present specimens. Additionally, we determined partial sequences of the mitochondrial cytochrome c oxidase subunit I(COI) from three feather mites as DNA barcodes.

First Record of the Brackish Water Amphipod Jesogammarus (Jesogammarus) hinumensis (Amphipoda: Anisogammaridae) from Korea with DNA Barcode Analysis among Jesogammarus Species

  • Lee, Chi-Woo;Tomikawa, Ko;Min, Gi-Sik
    • Animal Systematics, Evolution and Diversity
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    • 제35권3호
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    • pp.151-155
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    • 2019
  • Jesogammarus (Jesogammarus) hinumensis Morino, 1993 was discovered firstly from a brackish water region in Jeju Island, Korea. To identification of the specimens we conducted both of morphological and molecular analyses. This species is characterized by having large eyes and a robust seta on the mandibular palp article 1. The morphology of this Korean specimens was well matched with the original description without variation. The mitochondrial cytochrome c oxidase subunit I(COI) sequences of the present specimens were also completely identical to the sequences of J. (J.) hinumensis collected from the type locality of the species. Thus, we concluded that the Jesogammarus species from Jeju Island is J.(J.) hinumensis, based on both morphological and molecular data.

DNA Barcoding of Nereiphylla hera (Annelida: Polychaeta: Phyllodocidae) from South Korea

  • Kim, Hana;Choi, Hyun Ki
    • Animal Systematics, Evolution and Diversity
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    • 제35권3호
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    • pp.156-159
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    • 2019
  • The phyllodicd polychaete species, Nereiphylla hera Kato and Mawatari, 1999 is reported from the intertidal habitats of the eastern coast of South Korea. We determined the DNA barcoding region of the mitochondrial cytochrome c oxidase subunit I (COI) of N. hera and compared nucleotide variation with its congeners. The intra-specific genetic distance between the three COI sequences of N. hera was ranged from 0 to 0.4%. The inter-specific distances between N. hera and other Nereiphylla species ranged from 18.8 to 22.3%. In this study, we reported the first COI barcodes of N. hera with the morphologcial diagnosis and the photographs. These results would be helpful to understand taxonomy of Nereiphylla.

A New Record of the Brittle Star, Amphistigma minuta (Ophiuroidea: Amphilepidida: Amphiuridae), from Jeju Island, Korea

  • Lee, Taekjun;Shin, Sook
    • Animal Systematics, Evolution and Diversity
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    • 제35권2호
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    • pp.84-90
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    • 2019
  • The brittle star, Amphistigma minuta H.L. Clark, 1938, was collected from Munseom Island, Jeju-do, Korea, by SCUBA diving. This species has distinct morphological features, as follows: a small disk with large papillae on the disk margin; slender arms and four arm spines at proximal; and oral parts the same as those of the genus Amphipholis. Additionally, we obtained partial sequences of the cytochrome c oxidase subunit I gene (COI) (513 bp) and compared them with sequences from Australian A. minuta and 13 other species of Amphiuridae. As a result, intraspecific pairwise distance was 0.4% between two Korean individuals and intraspecific distance between the Australian and the Korean populations was 2.6-2.8%, which indicates they should be considered as the same species. Ultimately, 15 species of the family Amphiuridae have currently been recorded in Korea, including A. minuta.