• The Plant Pathology Journal
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• v.22 no.4
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• pp.318-322
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• 2006

One hundred and nine Agrobacterium isolates were recovered from 68 samples(51 plant tumor and 17 soil) that were collected from different habitats in Northern Jordan. The isolated cultures were grouped into 3 biovars based on their biochemical characteristics and biovar I, II, and III comprised a total number of 46, 41, and 22 isolates, respectively. Isolates of biovar I were obtained primarily from the diseased peach, oak and rose plants, whereas isolates of biovar II and ill were obtained mostly from apple and grape plants, respectively. Twenty-nine isolates were found to be virulent to at least one of the tested hosts such as carrots, chickpeas, garden peas and tomato plants with a response of tumor formation or tumor with roots induction. Our result suggested that A. tumefaciens strains from tumor of various plants and soil of Jordan were diverse and they have a variation in their virulence.

• Journal of Plant Biology
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• v.34 no.4
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• pp.331-339
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• 1991

To elucidate the regulatory mechanism of virE operon from vir regions (virA, virB, virC, virD, virG, virE) of pTiA6 which have been known to be essential for efficient crown gall tumorigenesis in plants, the activity of the truncated virE, promoter was analyzed. pSM358cd, a recombinant plasmid in which virE :: Tn3-HoHo1 (Tn3-promoterless lacZ) was cloned into SalI site of pVK102, was digested with SalI, and virE :: Tn3-HoHo1 was seperated from pVK102. To construct the truncted virE recombinant plasmids (pJS031, pJS051, pJS102, pJS201, pJS301), 5'-end of vireE promoter was deleted with BAL31 and cloned into pVK102 and then transferred into a. tumefaciens A348(pTiA6). According to the activity of the truncated virE promoter in recombinant plasmids, they were classified into two groups, pJS031, pJS051, pJS101 and pJS201 belong to a functional group and pJS301 is a non-functional. The size of deleted nucleotides of pJS201 and pJS301 seemed to be about 130 nucleotides and about 250 nucleotides from 5'-end of virE promoter, respectively. Hence it was thought that the essential site of the virE promoter was located between about 130th nucleotide and 250th nucleotide from 5'-end of the virE promoter.

• Journal of Plant Biotechnology
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• v.43 no.1
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• pp.37-48
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• 2016

The transcriptional profiles of 'Tamnara' grapevine (Vitis labruscana L.) to Rhizobium vitis were determined using 12,000 gene oligonucleotide microarray chips constructed with 6,776 unigenes based on the EST sequencing. Among them, 95 clones were up-regulated more than three times and 90 were down-regulated more than 5-times in the R. vitis-inoculated grapevines relative to the control vines. Treatment of salicylic acid showed that 337 clones were upregulated and 52 clones were down regulated in grapevines. Microarray analysis, reverse transcription-polymer chain reaction, and slot blot hybridization analysis revealed that 5, 14, and 64 clones were up-regulated and 10, 12, and 61 clones were down-regulated in wounded, salicylic acid-treated, and R. vitis-inoculated 'Tamnara' grapevine leaves, respectively. The expression patterns of ${\beta}$-1,3-glucanase, proline-rich protein, and lipoxygenase genes of 'Tamnara' moderately resistant to R. vitis were similar to those of resistant 'Concord' and 'Delaware' grapevines. However, chalcone synthase genes in 'Tamnara' grapevines showed similar expression patterns to susceptible grapevines 'Neomuscat' and 'Rizamat'. Further expression studies with various clones for each gene should be conducted to elucidate their roles in resistant responses against pathogens or other stimuli in grapevines. These results could provide better resources for understanding the mechanism of defense responses against crown gall disease and clues for identifying new genes that may play a role in defense against R. vitis in grapevines.

• Molecules and Cells
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• v.39 no.9
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• pp.705-713
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• 2016

The efficiency of Agrobacterium-mediated transformation in plants depends on the virulence of Agrobacterium strains, the plant tissue culture conditions, and the susceptibility of host plants. Understanding the molecular interactions between Agrobacterium and host plant cells is crucial when manipulating the susceptibility of recalcitrant crop plants and protecting orchard trees from crown gall disease. It was discovered that Arabidopsis voltage-dependent anion channel 1 (atvdac1) mutant has drastic effects on Agrobacterium-mediated tumorigenesis and growth developmental phenotypes, and that these effects are dependent on a Ws-0 genetic background. Genetic complementation of Arabidopsis vdac1 mutants and yeast porin1-deficient strain with members of the AtVDAC gene family revealed that AtVDAC1 is required for Agrobacterium-mediated transformation, and there is weak functional redundancy between AtVDAC1 and AtVDAC3, which is independent of porin activity. Furthermore, atvdac1 mutants were deficient in transient and stable transformation by Agrobacterium, suggesting that AtVDAC1 is involved in the early stages of Agrobacterium infection prior to transferred-DNA (T-DNA) integration. Transgenic plants overexpressing AtVDAC1 not only complemented the phenotypes of the atvdac1 mutant, but also showed high efficiency of transient T-DNA gene expression; however, the efficiency of stable transformation was not affected. Moreover, the effect of phytohormone treatment on competence to Agrobacterium was compromised in atvdac1 mutants. These data indicate that AtVDAC1 regulates the competence of Arabidopsis to Agrobacterium infection.

• Journal of Korean Society of Forest Science
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• v.5 no.1
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• pp.22-26
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• 1966

As a series of studies on the behaviour of Pine gallmidge (Theccdiplosis japonensis Uehida ei Inoaye), the season of the larval hibernation in winter as well as the season of the attack of adults on pine needles in the vicinity of Seoul were observed, and following results were obtained. 1. The larvae get out of the galls and fall into the ground for the hibernation commencing from the end of September and finishing by the end of January of the next year. 2. About 76% of the whole larvae fell down during the month of November. 3. The frequency and the duration of raining mainly influenced the larval falling into the ground but temperature, humidity and the quantity of rainfall was not likely influence upon it. 4. As many as 47,000 larvae were counted per 1.5 square meter of the ground under the crown of the damaged trees. 5. When pine needles were isolated by fine linen-net-bag to keep the needles from the oviposition of the adults of the insect, at six different season; -i.e. 30th, May, 6th, 10th, 15th, 25th, and 30th June, the percentages of the damage were 80%, 50%, 36%, 19%, 20% and 1% respectively, while the damage of the control was 91%.

• Korean Journal of Soil Science and Fertilizer
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• v.33 no.4
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• pp.253-260
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• 2000

The virulence(vir) genes in Ti plasmid at Agrobacterium tumefaciens are expressed by a phenolic compound synthesized at plant wound site. The vir genes inducing abilities of 8 phenolic compounds were tested using three wild type strains of A. tumefaciens. It was also investigated how the levels of vir gene expression among the strains tested could be related to the kinds of specific phenolic compounds. Five phenolic compounds like as 4-hydroxyacetophenone, phenol, catechol, resorcinol, and vanillin had exhibited a strong effect on the vir gene expression of A. tumefaciens MW102 whereas they did not be either non-functional or weakly inducible to the vir gene expression of other strains i.e. A. tumefaciens MW105 and MW108. Furthermore, the vir gene of A. tumefaciens MW102 was lowly expressed by acetosyringone that exposed an strong effect on the vir gene induction of other two strains. Thus, it appeared that the vir gene inducing abilities were differed by the kinds of phenolic compounds and Ti plasmids. In conclusion, we suppose that a change in vir gene inducing ability could be resulted from a difference of sensor protein expressed by vir A gene.

• Journal of the Korean Society of Environmental Restoration Technology
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• v.6 no.5
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• pp.59-69
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• 2003

Most denuded mountain areas in Korea were completely stabilized by the successful work of the 1st and 2nd 10-year Forest Development Plans which targeted the reforestation of denuded forest lands. The objectives of this study are (1) to estimate the depth of organic horizon in the soil profile, (2) to investigate the change of vegetation structure, (3) to estimate the change of biomass in the erosion controlled and rehabilitated mountain areas with the passage of time. This study was carried out as the 5th times. The first study began in the year of 1985, the second study was in the year of 1988, the third study was in the year of 1992, 4th was in the year of 1998 and 5th was in the year of 2002. The first study started in the study sites which elapsed 9 years after erosion control works. The results of the study were as follows : The increase rate of soil thickness was estimated to $Y_{(cm)}=2.906log_{(yr)}-3.2476(r^2=0.917)$ during 26 years after erosion control works. The important value of pines decreased to 14.7% on upper layer. But, the important value of alders. which did not plant on erosion control work increased to 27.1%. The decrease of whole crown projection indicates that pines. and alders were heavily injured by pine leaf gall midge in the year of 1993, 1995 years and Agelastica coerulea Baly in the year of 1986, 1987 years at Yoju-gun. The young growth of pines and alders not appeared on the soil surface which elapsed 26 years after erosion control works. On the lower layer, oaks occupied over 50% in I.V, RD, RC, RF. In process of years, the increase of biomass estimated to be $Y_{(t/ha)}={0.7505X_{(yr)}}^{1.6335}\;(r^2=0.9712)$ for 26 years after erosion control works.

• Korean Journal of Microbiology
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• v.31 no.4
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• pp.292-299
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• 1993

Agrobacterium tumefaciens KU12 isolated from Korea is able to induce tumors on various plants and catabolize octopine as a sole carbon and nitrogen source. A, tumefaciens KU12 contains three plasmids. Their sizes are 45.5 kb. 240 kb. and > 240 kb. respectively. For the purpose of identification of octopine type Ti plasmid, avirulent A, tumefacients A136 is transformed with plasmids isolated from KU12 by direct transformation. Transformants containing Ti plasmid were grown on AB medium containing octopine as a sole nitrogen source. The isolated strain, named KU911, contains only 240 kb plasmid. As a result of induction of crown gall and Southern hybridization with other octopine Ti plasmid pTiAch5, 240 kb plasmid named pTiKU12 was Ti plasmid.

• Journal of Life Science
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• v.11 no.5
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• pp.423-431
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• 2001

Genomic and cDNA clones containing the RAT3 gene involving in Agobacterium-mediated plant transformation were identified using plant DNA flanking the righ border of a T-DNA rescued from the rat3 mutant as hy-bridization probe. Two highly homologous cDNA clones were identified; one (RAT3-1) weakly hybridized with the probe whereas another (RAT3-2) strongly hybridized with the probe. Both Rat3-1 and Rat3-2 proteins contain a putative signal peptide for secretion. The deduced molecular weights of encoded proteins are 15 kDa. The results of genomic DNA blot analysis and DNA sequencing indicated that RAT3-1 and RAT3-2 exist as single copy genes and they were arranged side by side with just 600 bp distance between them. RAT3-1 was disrupted by the integration of T-DNA into the 3 untranslated region in rat3 mutant. A BLAST search showed that both RAT3-1 and RAT3-2 proteins have homology with only the C-terminal region of $\beta$-1,3-glucanase homologues from Triticum aestivum and Arabidopsis thaliana. Thses $\beta$-1,3-glucanase homologues contain an unusually long C-terminal region with no sig-nificant homology to other $\beta$-1,3-glucanase.

• Korean Journal of Plant Resources
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• v.13 no.3
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• pp.208-212
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• 2000

The effect of heat covering materials during cultivation of Shigyoku grape was examined on the effect of protection from freezing damage, labor reduction, and disease resistance during the wintering. This experimentwas accomplished using different combination of heat covering materials from the end of Nov as follows: straw and heat conservation cover B, kilding, color fabric A, and white needle punching fabric. Capacity of heat conservation was the least form white needle punching fabric, and the differences of other materials was slight. Early sprouting occurred by the treatment with heat conservation cover B, and the rate of sprouting was about 70.7% after 9 days of sprouting, showing 2.3-12.5% increase. Growth effect was not differ between heat conservation materials. Disease and insects occurred by the in dice 3.0-3.2 of crown gall from the heat conservation cover B treatment. Other damages were not observed or very little from other treatments. Demand of labor during steps of these treatments was more observed by 6% for kilding than heat conservation cover B, and those of color fabric A and white needle punching fabric were reduced by 6 and 15%, respectively.